RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 RBMXL2O75526 392 aaKnown RBP13.72□□□□□ -0.21
HLA-DMA-201ENST00000374843 MED6O75586 246 aa13.72□□□□□ -0.21
HLA-DMA-201ENST00000374843 OR2F2O95006 317 aa13.72□□□□□ -0.21
HLA-DMA-201ENST00000374843 HSPE1P61604 102 aaKnown RBP13.72□□□□□ -0.21
HLA-DMA-201ENST00000374843 POLR2GP62487 172 aaKnown RBP eCLIP13.72□□□□□ -0.21
HLA-DMA-201ENST00000374843 TMEM65Q6PI78 240 aa13.72□□□□□ -0.21
HLA-DMA-201ENST00000374843 NOXA1Q86UR1 476 aa13.72□□□□□ -0.21
HLA-DMA-201ENST00000374843 Q8N9W7 124 aa13.72□□□□□ -0.21
HLA-DMA-201ENST00000374843 OR5R1Q8NH85 324 aa13.72□□□□□ -0.21
HLA-DMA-201ENST00000374843 HYLS1Q96M11 299 aa13.72□□□□□ -0.21
HLA-DMA-201ENST00000374843 RBM14Q96PK6 669 aaKnown RBP13.72□□□□□ -0.21
HLA-DMA-201ENST00000374843 RAB40CQ96S21 281 aa13.72□□□□□ -0.21
HLA-DMA-201ENST00000374843 OR5AC2Q9NZP5 309 aa13.72□□□□□ -0.21
HLA-DMA-201ENST00000374843 MOB4Q9Y3A3 225 aa13.72□□□□□ -0.21
HLA-DMA-201ENST00000374843 LSM5Q9Y4Y9 91 aaKnown RBP13.72□□□□□ -0.21
HLA-DMA-201ENST00000374843 OR51B2Q9Y5P1 312 aa13.72□□□□□ -0.21
HLA-DMA-201ENST00000374843 MXRA5Q9NR99 2828 aa13.71□□□□□ -0.21
HLA-DMA-201ENST00000374843 HMSDA8MTL9 139 aa13.71□□□□□ -0.21
HLA-DMA-201ENST00000374843 FGF16O43320 207 aa13.71□□□□□ -0.21
HLA-DMA-201ENST00000374843 SYNGR2O43760 224 aa13.71□□□□□ -0.21
HLA-DMA-201ENST00000374843 SSSCA1O60232 199 aa13.71□□□□□ -0.21
HLA-DMA-201ENST00000374843 LY86O95711 162 aa13.71□□□□□ -0.21
HLA-DMA-201ENST00000374843 HNRNPCP07910 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
HLA-DMA-201ENST00000374843 SRP14P37108 136 aaKnown RBP13.71□□□□□ -0.21
HLA-DMA-201ENST00000374843 SSBP2P81877 361 aaPredicted RBP13.71□□□□□ -0.21
HLA-DMA-201ENST00000374843 PRCDQ00LT1 54 aa13.71□□□□□ -0.21
HLA-DMA-201ENST00000374843 Q6YL49 198 aa13.71□□□□□ -0.21
HLA-DMA-201ENST00000374843 IL17RELQ6ZVW7 336 aa13.71□□□□□ -0.21
HLA-DMA-201ENST00000374843 C16orf82Q7Z2V1 217 aa13.71□□□□□ -0.21
HLA-DMA-201ENST00000374843 THAP6Q8TBB0 222 aa13.71□□□□□ -0.21
HLA-DMA-201ENST00000374843 SMR3AQ99954 134 aa13.71□□□□□ -0.21
HLA-DMA-201ENST00000374843 RBKSQ9H477 322 aa13.71□□□□□ -0.21
HLA-DMA-201ENST00000374843 PITPNC1Q9UKF7 332 aa13.71□□□□□ -0.21
HLA-DMA-201ENST00000374843 NAV3Q8IVL0 2385 aa13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 E5RGE8 158 aa13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 INS-IGF2F8WCM5 200 aa13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 WRBO00258 174 aa13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 NXPH3O95157 252 aa13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 HLA-DRB1P01911 266 aa13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 RLN2P04090 185 aa13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 IER3P46695 156 aa13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 COMPP49747 757 aaPredicted RBP13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 TAS2R30P59541 319 aa13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 PJVKQ0ZLH3 352 aa13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 OR1L8Q8NGR8 309 aa13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 C22orf15Q8WYQ4 148 aa13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 SLC25A33Q9BSK2 321 aa13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 COMMD5Q9GZQ3 224 aa13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 MAGT1Q9H0U3 335 aa13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 NDUFA4L2Q9NRX3 87 aa13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 WSB1Q9Y6I7 421 aa13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 HIVEP1P15822 2718 aa13.7□□□□□ -0.22
HLA-DMA-201ENST00000374843 FXYD6-FXYD2A0A087WZ82 144 aa13.69□□□□□ -0.22
HLA-DMA-201ENST00000374843 TEX50A0A1B0GTY4 177 aa13.69□□□□□ -0.22
HLA-DMA-201ENST00000374843 TMEM50AO95807 157 aa13.69□□□□□ -0.22
HLA-DMA-201ENST00000374843 IFNA17P01571 189 aa13.69□□□□□ -0.22
HLA-DMA-201ENST00000374843 IGHV4-59P01825 116 aa13.69□□□□□ -0.22
HLA-DMA-201ENST00000374843 MYOD1P15172 320 aa13.69□□□□□ -0.22
HLA-DMA-201ENST00000374843 PVALBP20472 110 aaPredicted RBP13.69□□□□□ -0.22
HLA-DMA-201ENST00000374843 VDAC2P45880 294 aaPredicted RBP13.69□□□□□ -0.22
HLA-DMA-201ENST00000374843 PAX9P55771 341 aa13.69□□□□□ -0.22
HLA-DMA-201ENST00000374843 SCGB2A2Q13296 93 aa13.69□□□□□ -0.22
HLA-DMA-201ENST00000374843 PLGLAQ15195 96 aa13.69□□□□□ -0.22
HLA-DMA-201ENST00000374843 C5orf56Q8N8D9 126 aa13.69□□□□□ -0.22
HLA-DMA-201ENST00000374843 DTD1Q8TEA8 209 aa13.69□□□□□ -0.22
HLA-DMA-201ENST00000374843 SSMEM1Q8WWF3 244 aa13.69□□□□□ -0.22
HLA-DMA-201ENST00000374843 CIB3Q96Q77 187 aaPredicted RBP13.69□□□□□ -0.22
HLA-DMA-201ENST00000374843 TNFSF18Q9UNG2 199 aa13.69□□□□□ -0.22
HLA-DMA-201ENST00000374843 A0A1B0GW64 132 aa13.68□□□□□ -0.22
HLA-DMA-201ENST00000374843 CGB1A6NKQ9 187 aa13.68□□□□□ -0.22
HLA-DMA-201ENST00000374843 NCBP2LA6PVI3 153 aaKnown RBP13.68□□□□□ -0.22
HLA-DMA-201ENST00000374843 CYSRT1A8MQ03 144 aa13.68□□□□□ -0.22
HLA-DMA-201ENST00000374843 M0QZK8 103 aa13.68□□□□□ -0.22
HLA-DMA-201ENST00000374843 CHST1O43916 411 aa13.68□□□□□ -0.22
HLA-DMA-201ENST00000374843 CA2P00918 260 aa13.68□□□□□ -0.22
HLA-DMA-201ENST00000374843 P2RY1P47900 373 aa13.68□□□□□ -0.22
HLA-DMA-201ENST00000374843 C10orf55Q5SWW7 151 aa13.68□□□□□ -0.22
HLA-DMA-201ENST00000374843 CLEC9AQ6UXN8 241 aa13.68□□□□□ -0.22
HLA-DMA-201ENST00000374843 TMEM219Q86XT9 240 aa13.68□□□□□ -0.22
HLA-DMA-201ENST00000374843 TMEM86BQ8N661 226 aa13.68□□□□□ -0.22
HLA-DMA-201ENST00000374843 DCUN1D4Q92564 292 aa13.68□□□□□ -0.22
HLA-DMA-201ENST00000374843 ZDHHC16Q969W1 377 aa13.68□□□□□ -0.22
HLA-DMA-201ENST00000374843 SMIM8Q96KF7 97 aa13.68□□□□□ -0.22
HLA-DMA-201ENST00000374843 SRSF8Q9BRL6 282 aaKnown RBP13.68□□□□□ -0.22
HLA-DMA-201ENST00000374843 CDC42EP3Q9UKI2 254 aa13.68□□□□□ -0.22
HLA-DMA-201ENST00000374843 VPREB3Q9UKI3 123 aa13.68□□□□□ -0.22
HLA-DMA-201ENST00000374843 RNF222A6NCQ9 220 aa13.67□□□□□ -0.22
HLA-DMA-201ENST00000374843 CEBPZOSA8MTT3 80 aa13.67□□□□□ -0.22
HLA-DMA-201ENST00000374843 FCN1O00602 326 aa13.67□□□□□ -0.22
HLA-DMA-201ENST00000374843 GPR137BO60478 399 aa13.67□□□□□ -0.22
HLA-DMA-201ENST00000374843 TSC22D2O75157 780 aa13.67□□□□□ -0.22
HLA-DMA-201ENST00000374843 ACTL6BO94805 426 aa13.67□□□□□ -0.22
HLA-DMA-201ENST00000374843 RPL27AP46776 148 aaKnown RBP13.67□□□□□ -0.22
HLA-DMA-201ENST00000374843 ZNF345Q14585 488 aa13.67□□□□□ -0.22
HLA-DMA-201ENST00000374843 ZNF546Q86UE3 836 aa13.67□□□□□ -0.22
HLA-DMA-201ENST00000374843 GRPEL2Q8TAA5 225 aa13.67□□□□□ -0.22
HLA-DMA-201ENST00000374843 AQP10Q96PS8 301 aa13.67□□□□□ -0.22
HLA-DMA-201ENST00000374843 PLEKHA3Q9HB20 300 aa13.67□□□□□ -0.22
HLA-DMA-201ENST00000374843 LYRM2Q9NU23 88 aaPredicted RBP13.67□□□□□ -0.22
HLA-DMA-201ENST00000374843 A0A1W2PN81 502 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms