RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ASCL4Q6XD76 172 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 TIMM23BQ5SRD1 257 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 HAPLN4Q86UW8 402 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 TMEM86BQ8N661 226 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 NPFFR1Q9GZQ6 430 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 ARID2Q68CP9 1835 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 HLA-DQB1P01920 261 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 PTGDSP41222 190 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 GGTLC2Q14390 218 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 SFTA2Q6UW10 78 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 LOXL4Q96JB6 756 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 SSBP3Q9BWW4 388 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 YAE1D1Q9NRH1 226 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 CYSLTR1Q9Y271 337 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 STRCP1A6NGW2 1772 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 PRR33A8MZF0 331 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 FOXA3P55318 350 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 IMMP2LQ96T52 175 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 NXT2Q9NPJ8 142 aaKnown RBP11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 COX11Q9Y6N1 276 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 A0A1W2PRS3 328 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 VENTXO95231 258 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 NTN1O95631 604 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 FAM57AQ8TBR7 257 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 TFPI2P48307 235 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 PGFP49763 221 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 Q5BKY6 102 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 CENPVQ7Z7K6 275 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 SPANXA1Q9NS26 97 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 PEMTQ9UBM1 199 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 IGLV3-16A0A075B6K0 115 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 IGHV5-51A0A0C4DH38 117 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 NDUFA3O95167 84 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 NHP2Q9NX24 153 aaKnown RBP11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 OVOL2Q9BRP0 275 aa11.37□□□□□ -0.59
SRGAP3-201ENST00000360413 PTPRDP23468 1912 aa11.36□□□□□ -0.59
SRGAP3-201ENST00000360413 APOHP02749 345 aaPredicted RBP11.36□□□□□ -0.59
SRGAP3-201ENST00000360413 CBLN3Q6UW01 205 aa11.36□□□□□ -0.59
SRGAP3-201ENST00000360413 TRAV21A0A0B4J279 112 aa11.36□□□□□ -0.59
SRGAP3-201ENST00000360413 UBE2CO00762 179 aa11.36□□□□□ -0.59
SRGAP3-201ENST00000360413 CEACAM21Q3KPI0 293 aa11.36□□□□□ -0.59
SRGAP3-201ENST00000360413 IGHV3OR16-12A0A075B7B8 117 aa11.36□□□□□ -0.59
SRGAP3-201ENST00000360413 LINC01559Q495D7 138 aa11.36□□□□□ -0.59
SRGAP3-201ENST00000360413 GPR146Q96CH1 333 aa11.36□□□□□ -0.59
SRGAP3-201ENST00000360413 PRDM13Q9H4Q3 707 aa11.36□□□□□ -0.59
SRGAP3-201ENST00000360413 WDR81Q562E7 1941 aa11.36□□□□□ -0.59
SRGAP3-201ENST00000360413 TSC2P49815 1807 aa11.36□□□□□ -0.59
SRGAP3-201ENST00000360413 A0A087WWC5 75 aa11.36□□□□□ -0.59
SRGAP3-201ENST00000360413 SDF2L1Q9HCN8 221 aa11.36□□□□□ -0.59
SRGAP3-201ENST00000360413 BRCA1P38398 1863 aaKnown RBP11.36□□□□□ -0.59
SRGAP3-201ENST00000360413 CMC4P56277 68 aaPredicted RBP11.36□□□□□ -0.59
SRGAP3-201ENST00000360413 FHL5Q5TD97 284 aa11.36□□□□□ -0.59
SRGAP3-201ENST00000360413 IL36BQ9NZH7 164 aa11.36□□□□□ -0.59
SRGAP3-201ENST00000360413 HAX1O00165 279 aa11.35□□□□□ -0.59
SRGAP3-201ENST00000360413 DXOO77932 396 aaKnown RBP11.35□□□□□ -0.59
SRGAP3-201ENST00000360413 LIFP15018 202 aa11.35□□□□□ -0.59
SRGAP3-201ENST00000360413 NANOS3P60323 173 aaKnown RBP11.35□□□□□ -0.59
SRGAP3-201ENST00000360413 TMEM186Q96B77 213 aa11.35□□□□□ -0.59
SRGAP3-201ENST00000360413 C8orf82Q6P1X6 216 aaPredicted RBP11.35□□□□□ -0.59
SRGAP3-201ENST00000360413 UNQ5815/PRO19632Q6UWF5 114 aa11.35□□□□□ -0.59
SRGAP3-201ENST00000360413 RNF115Q9Y4L5 304 aa11.35□□□□□ -0.59
SRGAP3-201ENST00000360413 EGR1P18146 543 aa11.35□□□□□ -0.59
SRGAP3-201ENST00000360413 ATRAIDQ6UW56 229 aa11.35□□□□□ -0.59
SRGAP3-201ENST00000360413 REG1BP48304 166 aa11.35□□□□□ -0.59
SRGAP3-201ENST00000360413 CD1AP06126 327 aa11.35□□□□□ -0.59
SRGAP3-201ENST00000360413 ATP5J2P56134 94 aa11.35□□□□□ -0.59
SRGAP3-201ENST00000360413 PAX2Q02962 417 aa11.35□□□□□ -0.59
SRGAP3-201ENST00000360413 GAGE13Q4V321 117 aa11.35□□□□□ -0.59
SRGAP3-201ENST00000360413 SAXO1Q8IYX7 474 aa11.35□□□□□ -0.59
SRGAP3-201ENST00000360413 GTSF1LQ9H1H1 148 aa11.35□□□□□ -0.59
SRGAP3-201ENST00000360413 GPR132Q9UNW8 380 aa11.35□□□□□ -0.59
SRGAP3-201ENST00000360413 IGKV3OR2-268A0A0C4DH90 116 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 NXPH1P58417 271 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 PRSS41Q7RTY9 318 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 MRPS18AQ9NVS2 196 aaKnown RBP11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 CLDN14O95500 239 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 MAGEA5P43359 124 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 AHDC1Q5TGY3 1603 aaPredicted RBP11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 PLNP26678 52 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 GPX4P36969 197 aaPredicted RBP11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 FGF12P61328 243 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 S100A7L2Q5SY68 101 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 OR10W1Q8NGF6 305 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 MYEOVQ96EZ4 313 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 SAMD5Q5TGI4 173 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 C5orf66Q9H5L9 145 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 IGHV3OR15-7A0A075B7D8 119 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 C8orf88P0DMB2 117 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 HOXD3P31249 432 aaPredicted RBP11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 ACSF3Q4G176 576 aaPredicted RBP11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 FAM74A4Q5TZK3 123 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 CLEC7AQ9BXN2 247 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 EDA2RQ9HAV5 297 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 A0A1W2PPC1 479 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 ATG4DQ86TL0 474 aaPredicted RBP11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 GTSCR1Q86UQ5 136 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 NRN1Q9NPD7 142 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 PLXND1Q9Y4D7 1925 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 J3QW42 95 aa11.34□□□□□ -0.59
SRGAP3-201ENST00000360413 MPV17P39210 176 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms