RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 SORL1Q92673 2214 aa14.92□□□□□ -0.02
CACNA1A-201ENST00000360228 MRPL20Q9BYC9 149 aaKnown RBP14.92□□□□□ -0.02
CACNA1A-201ENST00000360228 Q6ZNB5 142 aa14.92□□□□□ -0.02
CACNA1A-201ENST00000360228 FBXW9Q5XUX1 488 aa14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 GPBAR1Q8TDU6 330 aa14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 TAF15Q92804 592 aaKnown RBP eCLIP14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 LINC00614P0C842 121 aa14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 OR4D11Q8NGI4 311 aa14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 CD69Q07108 199 aa14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 A0A1W2PP11 408 aa14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 H0YL77 283 aa14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 ASIPP42127 132 aa14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 FAM219BQ5XKK7 198 aa14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 HOXB3P14651 431 aaPredicted RBP14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 ATXN8Q156A1 80 aa14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 TUBD1Q9UJT1 453 aa14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 TMPRSS3P57727 454 aa14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 SSBP3Q9BWW4 388 aaPredicted RBP14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 IGHV1OR21-1A0A087WYE8 117 aa14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 CLDND2Q8NHS1 167 aa14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 ALX4Q9H161 411 aaPredicted RBP14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 CISD1Q9NZ45 108 aaKnown RBP14.91□□□□□ -0.02
CACNA1A-201ENST00000360228 SCTP09683 121 aa14.9□□□□□ -0.02
CACNA1A-201ENST00000360228 TMEM42Q69YG0 159 aa14.9□□□□□ -0.02
CACNA1A-201ENST00000360228 TDGF1P3P51864 188 aa14.9□□□□□ -0.02
CACNA1A-201ENST00000360228 TP53I13Q8NBR0 393 aaPredicted RBP14.9□□□□□ -0.02
CACNA1A-201ENST00000360228 MYEOVQ96EZ4 313 aa14.9□□□□□ -0.02
CACNA1A-201ENST00000360228 YAE1D1Q9NRH1 226 aa14.9□□□□□ -0.02
CACNA1A-201ENST00000360228 HOGA1Q86XE5 327 aa14.9□□□□□ -0.02
CACNA1A-201ENST00000360228 NPIPB4C9JG80 1138 aa14.9□□□□□ -0.02
CACNA1A-201ENST00000360228 PRSS53Q2L4Q9 553 aa14.9□□□□□ -0.02
CACNA1A-201ENST00000360228 TMEM155Q4W5P6 130 aa14.9□□□□□ -0.02
CACNA1A-201ENST00000360228 ZIC3O60481 467 aa14.9□□□□□ -0.02
CACNA1A-201ENST00000360228 PEAR1Q5VY43 1037 aaPredicted RBP14.9□□□□□ -0.02
CACNA1A-201ENST00000360228 MMD2Q8IY49 270 aa14.9□□□□□ -0.02
CACNA1A-201ENST00000360228 ASAH2BP0C7U1 165 aa14.9□□□□□ -0.02
CACNA1A-201ENST00000360228 MALRD1Q5VYJ5 2156 aa14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 MARCH11A6NNE9 402 aa14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 APOHP02749 345 aaPredicted RBP14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 G6PC2Q9NQR9 355 aa14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 TRGV2A0A075B6R0 118 aa14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 IGHV3-23P01764 117 aa14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 LINC01555Q8NAE3 123 aa14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 POC1AQ8NBT0 407 aa14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 HOXD3P31249 432 aaPredicted RBP14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 OR10W1Q8NGF6 305 aa14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 SDF2L1Q9HCN8 221 aa14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 CALYQ9NYX4 217 aa14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 C8orf88P0DMB2 117 aa14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 TRPM3Q9HCF6 1732 aaPredicted RBP14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 LOC390937A0A1W2PQ73 354 aa14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 H3BUT2 72 aa14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 TMEM222Q9H0R3 208 aa14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 CST9LQ9H4G1 147 aa14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 MRPS18BQ9Y676 258 aaKnown RBP14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 TNFRSF6BO95407 300 aa14.89□□□□□ -0.03
CACNA1A-201ENST00000360228 MUC21A0A0G2JKD1 596 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 MUC21A0A140T8X8 626 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 FXYD1O00168 92 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 SSBP2P81877 361 aaPredicted RBP14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 MUC21Q5SSG8 566 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 IGHV3-35A0A0C4DH35 117 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 CELA2BP08218 269 aaPredicted RBP14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 CXCL2P19875 107 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 DSCAML1Q8TD84 2053 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 OR4X2Q8NGF9 303 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 SEMA5BQ9P283 1151 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 ST6GALNAC2Q9UJ37 374 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 MPTX1A8MV57 137 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 NTN1O95631 604 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 CEACAM21Q3KPI0 293 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 PROB1E7EW31 1015 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 C1QL3Q5VWW1 255 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 LEAP2Q969E1 77 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 IGHV3-49A0A0A0MS15 119 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 C1orf174Q8IYL3 243 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 C19orf24Q9BVV8 132 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 WDR54Q9H977 334 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 OR2H2O95918 312 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 CCL3P10147 92 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 FOXA3P55318 350 aaPredicted RBP14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 ZNF585BQ52M93 769 aa14.88□□□□□ -0.03
CACNA1A-201ENST00000360228 TCRBV5S1A1TA0A578 114 aa14.87□□□□□ -0.03
CACNA1A-201ENST00000360228 LEPP41159 167 aa14.87□□□□□ -0.03
CACNA1A-201ENST00000360228 GPR183P32249 361 aa14.87□□□□□ -0.03
CACNA1A-201ENST00000360228 VSIG8P0DPA2 414 aa14.87□□□□□ -0.03
CACNA1A-201ENST00000360228 TNFRSF9Q07011 255 aa14.87□□□□□ -0.03
CACNA1A-201ENST00000360228 LRTM2Q8N967 370 aa14.87□□□□□ -0.03
CACNA1A-201ENST00000360228 ATG4DQ86TL0 474 aaPredicted RBP14.87□□□□□ -0.03
CACNA1A-201ENST00000360228 LINC01587Q99440 93 aa14.87□□□□□ -0.03
CACNA1A-201ENST00000360228 C21orf140B9A014 251 aa14.87□□□□□ -0.03
CACNA1A-201ENST00000360228 PTPRQQ9UMZ3 2332 aa14.87□□□□□ -0.03
CACNA1A-201ENST00000360228 CXorf51AA0A1B0GTR3 108 aa14.87□□□□□ -0.03
CACNA1A-201ENST00000360228 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.87□□□□□ -0.03
CACNA1A-201ENST00000360228 TRAV24A0A0B4J272 114 aa14.86□□□□□ -0.03
CACNA1A-201ENST00000360228 NAPSAO96009 420 aa14.86□□□□□ -0.03
CACNA1A-201ENST00000360228 UCP2P55851 309 aa14.86□□□□□ -0.03
CACNA1A-201ENST00000360228 GPHA2Q96T91 129 aa14.86□□□□□ -0.03
CACNA1A-201ENST00000360228 SERGEFQ9UGK8 458 aa14.86□□□□□ -0.03
CACNA1A-201ENST00000360228 PCDH15Q96QU1 1955 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms