RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 APOMO95445 188 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 FAM71F2Q6NXP2 309 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 TCF23Q7RTU1 214 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 KLF14Q8TD94 323 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-202ENST00000358808 KIAA1217Q5T5P2 1943 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 SIPA1L1O43166 1804 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 EPOPA6NHQ4 379 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 C1QAP02745 245 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 FGFRL1Q8N441 504 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 TEX45Q8NA69 505 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 TMEM167AQ8TBQ9 72 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 TXNDC17Q9BRA2 123 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 MCM3APO60318 1980 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 MMP16P51512 607 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 OR10J3Q5JRS4 329 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 STPG2Q8N412 459 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 OR11H7Q8NGC8 314 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 GLMPQ8WWB7 406 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 PSMG3Q9BT73 122 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-202ENST00000358808 ZNF146Q15072 292 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 TAF15Q92804 592 aaKnown RBP eCLIP8.69□□□□□ -1.02
CLIP1-202ENST00000358808 ZNF703Q9H7S9 590 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-202ENST00000358808 PLSCR2Q9NRY7 297 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 PARP14Q460N5 1801 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 IGHV3OR16-8A0A075B7F1 116 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 A0A1B0GWB2 263 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 PEX7O00628 323 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 PRSS23O95084 383 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 ZAR1Q86SH2 424 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 TTC9CQ8N5M4 171 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 SCARF2Q96GP6 870 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-202ENST00000358808 RPRMQ9NS64 109 aa8.69□□□□□ -1.02
CLIP1-202ENST00000358808 NEU4Q8WWR8 484 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-202ENST00000358808 GPR146Q96CH1 333 aa8.68□□□□□ -1.02
CLIP1-202ENST00000358808 CHCHD5Q9BSY4 110 aa8.68□□□□□ -1.02
CLIP1-202ENST00000358808 A0A0U1RQV5 110 aa8.68□□□□□ -1.02
CLIP1-202ENST00000358808 MARCH11A6NNE9 402 aa8.68□□□□□ -1.02
CLIP1-202ENST00000358808 ARPC1AQ92747 370 aa8.68□□□□□ -1.02
CLIP1-202ENST00000358808 MRPL20Q9BYC9 149 aaKnown RBP8.68□□□□□ -1.02
CLIP1-202ENST00000358808 OTOFQ9HC10 1997 aa8.68□□□□□ -1.02
CLIP1-202ENST00000358808 CD7P09564 240 aa8.68□□□□□ -1.02
CLIP1-202ENST00000358808 ZNF501Q96CX3 271 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-202ENST00000358808 NABP2Q9BQ15 211 aa8.68□□□□□ -1.02
CLIP1-202ENST00000358808 PRSS22Q9GZN4 317 aa8.68□□□□□ -1.02
CLIP1-202ENST00000358808 TMEM222Q9H0R3 208 aa8.68□□□□□ -1.02
CLIP1-202ENST00000358808 FBXL15Q9H469 300 aa8.68□□□□□ -1.02
CLIP1-202ENST00000358808 ZNF236Q9UL36 1845 aa8.68□□□□□ -1.02
CLIP1-202ENST00000358808 GLIPR1P48060 266 aa8.68□□□□□ -1.02
CLIP1-202ENST00000358808 IFITM3Q01628 133 aa8.68□□□□□ -1.02
CLIP1-202ENST00000358808 MEF2BQ02080 365 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-202ENST00000358808 CDCP2Q5VXM1 449 aa8.68□□□□□ -1.02
CLIP1-202ENST00000358808 SLC22A18ASQ8N1D0 253 aa8.68□□□□□ -1.02
CLIP1-202ENST00000358808 DLL3Q9NYJ7 618 aa8.68□□□□□ -1.02
CLIP1-202ENST00000358808 GREB1LQ9C091 1923 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-202ENST00000358808 TRGC2P03986 189 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 KLK2P20151 261 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 ZNF385CQ66K41 422 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-202ENST00000358808 CYP2G1PQ6ZSU1 146 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 TMEM252Q8N6L7 170 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 LRTM2Q8N967 370 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 A0A1B0GV72 72 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 ADARB2-AS1A8MUL3 147 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 MUC1P15941 1255 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-202ENST00000358808 LEMD1Q68G75 181 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 SELENOHQ8IZQ5 122 aaKnown RBP8.67□□□□□ -1.02
CLIP1-202ENST00000358808 KCNS1Q96KK3 526 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 CD160O95971 181 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 TYMSP04818 313 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 IL6RP08887 468 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-202ENST00000358808 MYOD1P15172 320 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 C1QTNF12Q5T7M4 302 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 PKIBQ9C010 78 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 HOXB1P14653 301 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-202ENST00000358808 FAM57AQ8TBR7 257 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 VCX2Q9H322 139 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 TCF19Q9Y242 345 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 DTX4Q9Y2E6 619 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 F12P00748 615 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-202ENST00000358808 ZP4Q12836 540 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 TMEM30BQ3MIR4 351 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 DPM3Q9P2X0 92 aa8.67□□□□□ -1.02
CLIP1-202ENST00000358808 LILRA1O75019 489 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 CDKN1AP38936 164 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 IFI27P40305 119 aaPredicted RBP8.66□□□□□ -1.02
CLIP1-202ENST00000358808 CKS1BP61024 79 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 TNFRSF9Q07011 255 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 TMEM86BQ8N661 226 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 SAP25Q8TEE9 199 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 NEUROG1Q92886 237 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 TGIF2-C20orf24A0A0A6YYL0 155 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 EFEMP2O95967 443 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 ZNF79Q15937 498 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 C19orf24Q9BVV8 132 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 GRIFINA4D1Z8 144 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 LINC00158P58513 81 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 OR4D11Q8NGI4 311 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 JPT2Q9H910 190 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 C21orf62Q9NYP8 219 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 SAP30O75446 220 aa8.66□□□□□ -1.02
CLIP1-202ENST00000358808 PEBP1P30086 187 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms