RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 CNTRLQ7Z7A1 2325 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 SNURFLB1AK76 121 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 IGKV1D-16P01601 117 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 HBZP02008 142 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 SLC25A6P12236 298 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 ARF1P84077 181 aaKnown RBP12.33□□□□□ -0.44
USP6-202ENST00000357482 GFRALQ6UXV0 394 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 ATG4DQ86TL0 474 aaPredicted RBP12.33□□□□□ -0.44
USP6-202ENST00000357482 HAPLN4Q86UW8 402 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 ZNF418Q8TF45 676 aaPredicted RBP12.33□□□□□ -0.44
USP6-202ENST00000357482 TSKUQ8WUA8 353 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 CACNG8Q8WXS5 425 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 NEUROG1Q92886 237 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 SPANXA1Q9NS26 97 aa12.33□□□□□ -0.44
USP6-202ENST00000357482 BOKQ9UMX3 212 aaPredicted RBP12.33□□□□□ -0.44
USP6-202ENST00000357482 C3orf85A0A1B0GTC6 90 aa12.32□□□□□ -0.44
USP6-202ENST00000357482 KIAA1324LA8MWY0 1029 aaPredicted RBP12.32□□□□□ -0.44
USP6-202ENST00000357482 PLPP3O14495 311 aa12.32□□□□□ -0.44
USP6-202ENST00000357482 ADAM20O43506 726 aa12.32□□□□□ -0.44
USP6-202ENST00000357482 CHST1O43916 411 aa12.32□□□□□ -0.44
USP6-202ENST00000357482 BLVRBP30043 206 aaPredicted RBP12.32□□□□□ -0.44
USP6-202ENST00000357482 ARL3P36405 182 aa12.32□□□□□ -0.44
USP6-202ENST00000357482 FUT6P51993 359 aa12.32□□□□□ -0.44
USP6-202ENST00000357482 HERV-K104P63124 156 aa12.32□□□□□ -0.44
USP6-202ENST00000357482 RELBQ01201 579 aa12.32□□□□□ -0.44
USP6-202ENST00000357482 PMP22Q01453 160 aa12.32□□□□□ -0.44
USP6-202ENST00000357482 TESK1Q15569 626 aa12.32□□□□□ -0.44
USP6-202ENST00000357482 OR1C1Q15619 314 aa12.32□□□□□ -0.44
USP6-202ENST00000357482 ZNF141Q15928 474 aa12.32□□□□□ -0.44
USP6-202ENST00000357482 NNATQ16517 81 aa12.32□□□□□ -0.44
USP6-202ENST00000357482 SRSF7Q16629 238 aaKnown RBP eCLIP12.32□□□□□ -0.44
USP6-202ENST00000357482 HIST2H2BCQ6DN03 193 aa12.32□□□□□ -0.44
USP6-202ENST00000357482 RPS19BP1Q86WX3 136 aaKnown RBP12.32□□□□□ -0.44
USP6-202ENST00000357482 ZNF439Q8NDP4 499 aa12.32□□□□□ -0.44
USP6-202ENST00000357482 DEFB126Q9BYW3 111 aa12.32□□□□□ -0.44
USP6-202ENST00000357482 SLC22A20A6NK97 555 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 F2Z2F3 143 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 NUDT14O95848 222 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 GPR183P32249 361 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 GAGE5Q13069 117 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 GAGE6Q13070 117 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 SPINK14Q6IE38 97 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 GPR82Q96P67 336 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 FNDC4Q9H6D8 234 aaPredicted RBP12.31□□□□□ -0.44
USP6-202ENST00000357482 VSIRQ9H7M9 311 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 KCNIP2Q9NS61 270 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 HIF1ANQ9NWT6 349 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 KLHL13Q9P2N7 655 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 LY96Q9Y6Y9 160 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 USP9YO00507 2555 aaPredicted RBP12.31□□□□□ -0.44
USP6-202ENST00000357482 IGKV3-11P04433 115 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 VDAC1P21796 283 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 IL12BP29460 328 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 RPL18Q07020 188 aaKnown RBP12.31□□□□□ -0.44
USP6-202ENST00000357482 ZNF788Q6ZQV5 615 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 TMEM178AQ8NBL3 297 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 OR10AG1Q8NH19 301 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 MBD6Q96DN6 1003 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 HES7Q9BYE0 225 aa12.31□□□□□ -0.44
USP6-202ENST00000357482 TSSC4Q9Y5U2 329 aaPredicted RBP12.31□□□□□ -0.44
USP6-202ENST00000357482 CRXO43186 299 aaPredicted RBP12.3□□□□□ -0.44
USP6-202ENST00000357482 LMX1BO60663 402 aa12.3□□□□□ -0.44
USP6-202ENST00000357482 HLA-DQA1P01909 254 aa12.3□□□□□ -0.44
USP6-202ENST00000357482 SSTR5P35346 364 aa12.3□□□□□ -0.44
USP6-202ENST00000357482 PAX9P55771 341 aa12.3□□□□□ -0.44
USP6-202ENST00000357482 RNPS1Q15287 305 aaKnown RBP12.3□□□□□ -0.44
USP6-202ENST00000357482 TMEM177Q53S58 311 aa12.3□□□□□ -0.44
USP6-202ENST00000357482 MARCH3Q86UD3 253 aa12.3□□□□□ -0.44
USP6-202ENST00000357482 ATOH7Q8N100 152 aa12.3□□□□□ -0.44
USP6-202ENST00000357482 ZNF525Q8N782 197 aa12.3□□□□□ -0.44
USP6-202ENST00000357482 ADAT3Q96EY9 351 aaPredicted RBP12.3□□□□□ -0.44
USP6-202ENST00000357482 HES4Q9HCC6 221 aa12.3□□□□□ -0.44
USP6-202ENST00000357482 PSG8Q9UQ74 426 aa12.3□□□□□ -0.44
USP6-202ENST00000357482 IGKV1D-42A0A075B6H8 117 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 IGLV1-36A0A0B4J1U3 117 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 PRSS37A4D1T9 235 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 FAM181BA6NEQ2 426 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 ZNF850A8MQ14 1090 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 H7C1C5 153 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 PRKNO60260 465 aaPredicted RBP12.29□□□□□ -0.44
USP6-202ENST00000357482 SERPINE2P07093 398 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 IER3P46695 156 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 RPL24P83731 157 aaKnown RBP12.29□□□□□ -0.44
USP6-202ENST00000357482 PSG4Q00888 419 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 RPEL1Q2QD12 228 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 CXorf66Q5JRM2 361 aaPredicted RBP12.29□□□□□ -0.44
USP6-202ENST00000357482 MDS2Q8NDY4 140 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 OR4A5Q8NH83 315 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 UBE2J1Q9Y385 318 aaPredicted RBP12.29□□□□□ -0.44
USP6-202ENST00000357482 SPTAN1Q13813 2472 aaKnown RBP12.29□□□□□ -0.44
USP6-202ENST00000357482 TRGV8A0A0C4DH27 118 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 C11orf94C9JXX5 98 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 TMEM50AO95807 157 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 CELA3BP08861 270 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 ZNF823P16415 610 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 NFAM1Q8NET5 270 aaPredicted RBP12.29□□□□□ -0.44
USP6-202ENST00000357482 BLNKQ8WV28 456 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 LSM10Q969L4 123 aaKnown RBP12.29□□□□□ -0.44
USP6-202ENST00000357482 TMEM70Q9BUB7 260 aa12.29□□□□□ -0.44
USP6-202ENST00000357482 ERG28Q9UKR5 140 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms