RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 RBFOX2O43251 390 aaKnown RBP eCLIP16.1■□□□□ 0.17
COL13A1-201ENST00000354547 MOB3BQ86TA1 216 aa16.1■□□□□ 0.17
COL13A1-201ENST00000354547 ENY2Q9NPA8 101 aa16.1■□□□□ 0.17
COL13A1-201ENST00000354547 TRBV20OR9-2A0A075B6H5 130 aa16.1■□□□□ 0.17
COL13A1-201ENST00000354547 A0A1B0GUS0 222 aa16.1■□□□□ 0.17
COL13A1-201ENST00000354547 F2RL2O00254 374 aa16.1■□□□□ 0.17
COL13A1-201ENST00000354547 PDE6DO43924 150 aa16.1■□□□□ 0.17
COL13A1-201ENST00000354547 NDUFS6O75380 124 aaKnown RBP16.1■□□□□ 0.17
COL13A1-201ENST00000354547 OPRK1P41145 380 aa16.1■□□□□ 0.17
COL13A1-201ENST00000354547 NUBP1P53384 320 aa16.1■□□□□ 0.17
COL13A1-201ENST00000354547 RND1Q92730 232 aa16.1■□□□□ 0.17
COL13A1-201ENST00000354547 PTPRZ1P23471 2315 aaPredicted RBP16.09■□□□□ 0.17
COL13A1-201ENST00000354547 TPRP12270 2363 aaKnown RBP16.09■□□□□ 0.17
COL13A1-201ENST00000354547 CA2P00918 260 aa16.09■□□□□ 0.17
COL13A1-201ENST00000354547 KCNIP4Q6PIL6 250 aa16.09■□□□□ 0.17
COL13A1-201ENST00000354547 POLEQ07864 2286 aa16.09■□□□□ 0.17
COL13A1-201ENST00000354547 IL6RP08887 468 aaPredicted RBP16.09■□□□□ 0.17
COL13A1-201ENST00000354547 NPY1RP25929 384 aa16.09■□□□□ 0.17
COL13A1-201ENST00000354547 IL3RAP26951 378 aa16.09■□□□□ 0.17
COL13A1-201ENST00000354547 TNFAIP6P98066 277 aaPredicted RBP16.09■□□□□ 0.17
COL13A1-201ENST00000354547 TCF23Q7RTU1 214 aa16.09■□□□□ 0.17
COL13A1-201ENST00000354547 C1orf159Q96HA4 380 aa16.09■□□□□ 0.17
COL13A1-201ENST00000354547 DIRC2Q96SL1 478 aa16.09■□□□□ 0.17
COL13A1-201ENST00000354547 YTHDF2Q9Y5A9 579 aaKnown RBP16.09■□□□□ 0.17
COL13A1-201ENST00000354547 FAM215AQ9Y5M1 114 aa16.09■□□□□ 0.17
COL13A1-201ENST00000354547 TRGV10A0A0A0MS01 117 aa16.08■□□□□ 0.17
COL13A1-201ENST00000354547 SLC24A4Q8NFF2 622 aa16.08■□□□□ 0.17
COL13A1-201ENST00000354547 SGMS2Q8NHU3 365 aa16.08■□□□□ 0.17
COL13A1-201ENST00000354547 NPVFQ9HCQ7 196 aa16.08■□□□□ 0.17
COL13A1-201ENST00000354547 GCM1Q9NP62 436 aa16.08■□□□□ 0.17
COL13A1-201ENST00000354547 MBD3L4A6NDZ8 208 aaPredicted RBP16.08■□□□□ 0.16
COL13A1-201ENST00000354547 MBD3L3A6NE82 208 aaPredicted RBP16.08■□□□□ 0.16
COL13A1-201ENST00000354547 MBD3L5A6NJ08 208 aaPredicted RBP16.08■□□□□ 0.16
COL13A1-201ENST00000354547 PRSS46E5RG02 174 aa16.08■□□□□ 0.16
COL13A1-201ENST00000354547 F6UZH7 168 aa16.08■□□□□ 0.16
COL13A1-201ENST00000354547 K7EM74 188 aa16.08■□□□□ 0.16
COL13A1-201ENST00000354547 VENTXO95231 258 aa16.08■□□□□ 0.16
COL13A1-201ENST00000354547 IGFBP2P18065 325 aa16.08■□□□□ 0.16
COL13A1-201ENST00000354547 GLRXP35754 106 aa16.08■□□□□ 0.16
COL13A1-201ENST00000354547 STPG3Q8N7X2 389 aa16.08■□□□□ 0.16
COL13A1-201ENST00000354547 MBD3L2Q8NHZ7 208 aaPredicted RBP16.08■□□□□ 0.16
COL13A1-201ENST00000354547 LRFN3Q9BTN0 628 aa16.08■□□□□ 0.16
COL13A1-201ENST00000354547 KCNIP2Q9NS61 270 aa16.08■□□□□ 0.16
COL13A1-201ENST00000354547 ZGRF1Q86YA3 2104 aa16.08■□□□□ 0.16
COL13A1-201ENST00000354547 KBTBD11-OT1A0A1B0GTJ5 212 aa16.08■□□□□ 0.16
COL13A1-201ENST00000354547 C15orf61A6NNL5 157 aa16.08■□□□□ 0.16
COL13A1-201ENST00000354547 GATA2P23769 480 aaPredicted RBP16.08■□□□□ 0.16
COL13A1-201ENST00000354547 CCL8P80075 99 aa16.08■□□□□ 0.16
COL13A1-201ENST00000354547 OR4P4Q8NGL7 312 aa16.08■□□□□ 0.16
COL13A1-201ENST00000354547 TIMM23BQ5SRD1 257 aa16.07■□□□□ 0.16
COL13A1-201ENST00000354547 DDB2Q92466 427 aa16.07■□□□□ 0.16
COL13A1-201ENST00000354547 RNF7Q9UBF6 113 aa16.07■□□□□ 0.16
COL13A1-201ENST00000354547 GGCTO75223 188 aaKnown RBP16.07■□□□□ 0.16
COL13A1-201ENST00000354547 MPDU1O75352 247 aa16.07■□□□□ 0.16
COL13A1-201ENST00000354547 CXorf1O96002 111 aa16.07■□□□□ 0.16
COL13A1-201ENST00000354547 LHBP01229 141 aa16.07■□□□□ 0.16
COL13A1-201ENST00000354547 IGKV1-16P04430 117 aa16.07■□□□□ 0.16
COL13A1-201ENST00000354547 STAG3L2P0CL84 134 aa16.07■□□□□ 0.16
COL13A1-201ENST00000354547 STAG3L3P0CL85 134 aa16.07■□□□□ 0.16
COL13A1-201ENST00000354547 NDUFB7P17568 137 aa16.07■□□□□ 0.16
COL13A1-201ENST00000354547 GPX4P36969 197 aaPredicted RBP16.07■□□□□ 0.16
COL13A1-201ENST00000354547 TEPPQ6URK8 271 aa16.07■□□□□ 0.16
COL13A1-201ENST00000354547 ZNF292O60281 2723 aa16.06■□□□□ 0.16
COL13A1-201ENST00000354547 MDFIC2A0A1B0GVS7 189 aa16.06■□□□□ 0.16
COL13A1-201ENST00000354547 EFNB3Q15768 340 aa16.06■□□□□ 0.16
COL13A1-201ENST00000354547 OCC1Q8TAD7 63 aa16.06■□□□□ 0.16
COL13A1-201ENST00000354547 TP53TG5Q9Y2B4 290 aa16.06■□□□□ 0.16
COL13A1-201ENST00000354547 OR51B2Q9Y5P1 312 aa16.06■□□□□ 0.16
COL13A1-201ENST00000354547 TRAPPC1Q9Y5R8 145 aa16.06■□□□□ 0.16
COL13A1-201ENST00000354547 SRP14P37108 136 aaKnown RBP16.06■□□□□ 0.16
COL13A1-201ENST00000354547 HSPE1P61604 102 aaKnown RBP16.06■□□□□ 0.16
COL13A1-201ENST00000354547 MLANAQ16655 118 aa16.06■□□□□ 0.16
COL13A1-201ENST00000354547 OR52E5Q8NH55 327 aa16.06■□□□□ 0.16
COL13A1-201ENST00000354547 FAM216AQ8WUB2 273 aa16.06■□□□□ 0.16
COL13A1-201ENST00000354547 SFRP2Q96HF1 295 aa16.06■□□□□ 0.16
COL13A1-201ENST00000354547 SH3BGRL2Q9UJC5 107 aa16.06■□□□□ 0.16
COL13A1-201ENST00000354547 GZMBP10144 247 aa16.05■□□□□ 0.16
COL13A1-201ENST00000354547 RAB7AP51149 207 aa16.05■□□□□ 0.16
COL13A1-201ENST00000354547 PAX5Q02548 391 aa16.05■□□□□ 0.16
COL13A1-201ENST00000354547 ACTL10Q5JWF8 245 aa16.05■□□□□ 0.16
COL13A1-201ENST00000354547 RAB1CQ92928 201 aa16.05■□□□□ 0.16
COL13A1-201ENST00000354547 IDI2-AS1Q9NZ38 188 aa16.05■□□□□ 0.16
COL13A1-201ENST00000354547 ZMAT5Q9UDW3 170 aaKnown RBP16.05■□□□□ 0.16
COL13A1-201ENST00000354547 A0A1B0GWJ7 208 aa16.05■□□□□ 0.16
COL13A1-201ENST00000354547 SLC17A3O00476 420 aa16.05■□□□□ 0.16
COL13A1-201ENST00000354547 TMPRSS2O15393 492 aa16.05■□□□□ 0.16
COL13A1-201ENST00000354547 IGHV1-46P01743 117 aa16.05■□□□□ 0.16
COL13A1-201ENST00000354547 SELENOVP59797 346 aa16.05■□□□□ 0.16
COL13A1-201ENST00000354547 RPL31P62899 125 aaKnown RBP16.05■□□□□ 0.16
COL13A1-201ENST00000354547 FAM90A9PA6NNJ1 464 aa16.05■□□□□ 0.16
COL13A1-201ENST00000354547 CGB3P0DN86 165 aa16.05■□□□□ 0.16
COL13A1-201ENST00000354547 CGB7P0DN87 165 aa16.05■□□□□ 0.16
COL13A1-201ENST00000354547 GCHFRP30047 84 aa16.05■□□□□ 0.16
COL13A1-201ENST00000354547 CFHR2P36980 270 aa16.05■□□□□ 0.16
COL13A1-201ENST00000354547 CR1LQ2VPA4 569 aa16.05■□□□□ 0.16
COL13A1-201ENST00000354547 AARDQ4LEZ3 155 aa16.05■□□□□ 0.16
COL13A1-201ENST00000354547 MRPL41Q8IXM3 137 aaKnown RBP16.05■□□□□ 0.16
COL13A1-201ENST00000354547 ZCCHC14Q8WYQ9 949 aaKnown RBP16.04■□□□□ 0.16
COL13A1-201ENST00000354547 TSTD3H0UI37 97 aa16.04■□□□□ 0.16
COL13A1-201ENST00000354547 J3QR06 171 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms