RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 HIST1H1BP16401 226 aaKnown RBP12.18□□□□□ -0.46
TSPAN4-201ENST00000346501 ECI1P42126 302 aa12.18□□□□□ -0.46
TSPAN4-201ENST00000346501 LPAR6P43657 344 aa12.18□□□□□ -0.46
TSPAN4-201ENST00000346501 RHOGP84095 191 aa12.18□□□□□ -0.46
TSPAN4-201ENST00000346501 TMEM229BQ8NBD8 167 aa12.18□□□□□ -0.46
TSPAN4-201ENST00000346501 ZFAND1Q8TCF1 268 aa12.18□□□□□ -0.46
TSPAN4-201ENST00000346501 DLX4Q92988 240 aaPredicted RBP12.18□□□□□ -0.46
TSPAN4-201ENST00000346501 ZNF486Q96H40 463 aaPredicted RBP12.18□□□□□ -0.46
TSPAN4-201ENST00000346501 ABHD1Q96SE0 405 aa12.18□□□□□ -0.46
TSPAN4-201ENST00000346501 TSC22D3Q99576 134 aa12.18□□□□□ -0.46
TSPAN4-201ENST00000346501 RSRP1Q9BUV0 290 aa12.18□□□□□ -0.46
TSPAN4-201ENST00000346501 FAM212BQ9NTI7 297 aaPredicted RBP12.18□□□□□ -0.46
TSPAN4-201ENST00000346501 RSL24D1Q9UHA3 163 aaKnown RBP12.18□□□□□ -0.46
TSPAN4-201ENST00000346501 TNCP24821 2201 aa12.18□□□□□ -0.46
TSPAN4-201ENST00000346501 HMX3A6NHT5 357 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 MARCH11A6NNE9 402 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 NPIPB5A8MRT5 1133 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 H3BMQ9 156 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 UPK2O00526 184 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 ATG12O94817 140 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 LY86O95711 162 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 RAB3DO95716 219 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 KRASP01116 189 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 SERPINE2P07093 398 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 ZNF735P0CB33 412 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 KRTAP10-11P60412 298 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 MEF2DQ14814 521 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 RPEL1Q2QD12 228 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 ZNF343Q6P1L6 599 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 HSD17B13Q7Z5P4 300 aaPredicted RBP12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 OR6Q1Q8NGQ2 317 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 MCFD2Q8NI22 146 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 SRSF8Q9BRL6 282 aaKnown RBP12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 MIXL1Q9H2W2 232 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 FKBP11Q9NYL4 201 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 THYN1Q9P016 225 aa12.17□□□□□ -0.46
TSPAN4-201ENST00000346501 DISC1C4P0D8 188 aa12.16□□□□□ -0.46
TSPAN4-201ENST00000346501 PSMB6P28072 239 aa12.16□□□□□ -0.46
TSPAN4-201ENST00000346501 EXOSC2Q13868 293 aaKnown RBP12.16□□□□□ -0.46
TSPAN4-201ENST00000346501 SCGB2B2Q4G0G5 96 aa12.16□□□□□ -0.46
TSPAN4-201ENST00000346501 STEAP1BQ6NZ63 245 aa12.16□□□□□ -0.46
TSPAN4-201ENST00000346501 TBC1D26Q86UD7 250 aa12.16□□□□□ -0.46
TSPAN4-201ENST00000346501 CCDC71LQ8N9Z2 235 aa12.16□□□□□ -0.46
TSPAN4-201ENST00000346501 QTRT1Q9BXR0 403 aaKnown RBP12.16□□□□□ -0.46
TSPAN4-201ENST00000346501 AKIP1Q9NQ31 210 aa12.16□□□□□ -0.46
TSPAN4-201ENST00000346501 COPZ2Q9P299 210 aa12.16□□□□□ -0.46
TSPAN4-201ENST00000346501 TEX22C9J3V5 150 aa12.15□□□□□ -0.46
TSPAN4-201ENST00000346501 CTDSPLO15194 276 aa12.15□□□□□ -0.46
TSPAN4-201ENST00000346501 OR2J3O76001 311 aa12.15□□□□□ -0.46
TSPAN4-201ENST00000346501 IL6RP08887 468 aaPredicted RBP12.15□□□□□ -0.46
TSPAN4-201ENST00000346501 TRAPPC2P0DI81 140 aa12.15□□□□□ -0.46
TSPAN4-201ENST00000346501 TRAPPC2BP0DI82 140 aa12.15□□□□□ -0.46
TSPAN4-201ENST00000346501 RPA2P15927 270 aa12.15□□□□□ -0.46
TSPAN4-201ENST00000346501 S100A5P33763 92 aa12.15□□□□□ -0.46
TSPAN4-201ENST00000346501 ACSM6Q6P461 480 aa12.15□□□□□ -0.46
TSPAN4-201ENST00000346501 CADM3Q8N126 398 aa12.15□□□□□ -0.46
TSPAN4-201ENST00000346501 OR1L8Q8NGR8 309 aa12.15□□□□□ -0.46
TSPAN4-201ENST00000346501 TERB2Q8NHR7 220 aa12.15□□□□□ -0.46
TSPAN4-201ENST00000346501 SMIM4Q8WVI0 70 aa12.15□□□□□ -0.46
TSPAN4-201ENST00000346501 FBXL7Q9UJT9 491 aa12.15□□□□□ -0.46
TSPAN4-201ENST00000346501 PRNDQ9UKY0 176 aa12.15□□□□□ -0.46
TSPAN4-201ENST00000346501 ZNF256Q9Y2P7 627 aaPredicted RBP12.15□□□□□ -0.46
TSPAN4-201ENST00000346501 TRBV9A0A0B4J1U6 114 aa12.14□□□□□ -0.47
TSPAN4-201ENST00000346501 WI2-2373I1.2A0A1W2PRP0 233 aa12.14□□□□□ -0.47
TSPAN4-201ENST00000346501 FABP12A6NFH5 140 aa12.14□□□□□ -0.47
TSPAN4-201ENST00000346501 K7EIL1 84 aa12.14□□□□□ -0.47
TSPAN4-201ENST00000346501 RBMXL2O75526 392 aaKnown RBP12.14□□□□□ -0.47
TSPAN4-201ENST00000346501 PRH1P02810 166 aa12.14□□□□□ -0.47
TSPAN4-201ENST00000346501 AKAIN1P0CW23 69 aa12.14□□□□□ -0.47
TSPAN4-201ENST00000346501 G6PCP35575 357 aa12.14□□□□□ -0.47
TSPAN4-201ENST00000346501 C15orf32Q32M92 178 aa12.14□□□□□ -0.47
TSPAN4-201ENST00000346501 H2BFWTQ7Z2G1 175 aa12.14□□□□□ -0.47
TSPAN4-201ENST00000346501 EEF1AKMT3Q96AZ1 226 aa12.14□□□□□ -0.47
TSPAN4-201ENST00000346501 TMEM56Q96MV1 263 aa12.14□□□□□ -0.47
TSPAN4-201ENST00000346501 HINT2Q9BX68 163 aa12.14□□□□□ -0.47
TSPAN4-201ENST00000346501 PEMTQ9UBM1 199 aa12.14□□□□□ -0.47
TSPAN4-201ENST00000346501 C14orf166Q9Y224 244 aaKnown RBP12.14□□□□□ -0.47
TSPAN4-201ENST00000346501 CD74P04233 296 aa12.13□□□□□ -0.47
TSPAN4-201ENST00000346501 CRYGCP07315 174 aa12.13□□□□□ -0.47
TSPAN4-201ENST00000346501 AREGP15514 252 aa12.13□□□□□ -0.47
TSPAN4-201ENST00000346501 MECP2P51608 486 aaKnown RBP12.13□□□□□ -0.47
TSPAN4-201ENST00000346501 PPP5CP53041 499 aa12.13□□□□□ -0.47
TSPAN4-201ENST00000346501 PIGPP57054 158 aa12.13□□□□□ -0.47
TSPAN4-201ENST00000346501 OR2B8PP59922 312 aa12.13□□□□□ -0.47
TSPAN4-201ENST00000346501 RND3P61587 244 aa12.13□□□□□ -0.47
TSPAN4-201ENST00000346501 DEFA5Q01523 94 aa12.13□□□□□ -0.47
TSPAN4-201ENST00000346501 OR5B3Q8NH48 314 aa12.13□□□□□ -0.47
TSPAN4-201ENST00000346501 OR4A16Q8NH70 328 aa12.13□□□□□ -0.47
TSPAN4-201ENST00000346501 CXorf58Q96LI9 332 aa12.13□□□□□ -0.47
TSPAN4-201ENST00000346501 SLIRPQ9GZT3 109 aaKnown RBP12.13□□□□□ -0.47
TSPAN4-201ENST00000346501 OR51B2Q9Y5P1 312 aa12.13□□□□□ -0.47
TSPAN4-201ENST00000346501 CEPT1Q9Y6K0 416 aa12.13□□□□□ -0.47
TSPAN4-201ENST00000346501 B3GALNT1O75752 331 aa12.12□□□□□ -0.47
TSPAN4-201ENST00000346501 CTRB1P17538 263 aa12.12□□□□□ -0.47
TSPAN4-201ENST00000346501 PTBP1P26599 531 aaKnown RBP eCLIP12.12□□□□□ -0.47
TSPAN4-201ENST00000346501 SYNJ2BPP57105 145 aa12.12□□□□□ -0.47
TSPAN4-201ENST00000346501 KLF5Q13887 457 aaPredicted RBP12.12□□□□□ -0.47
TSPAN4-201ENST00000346501 ZNF585BQ52M93 769 aa12.12□□□□□ -0.47
TSPAN4-201ENST00000346501 CTRB2Q6GPI1 263 aa12.12□□□□□ -0.47
TSPAN4-201ENST00000346501 LHFPL1Q86WI0 220 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms