RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 TMEM91Q6ZNR0 172 aa15.21■□□□□ 0.02
SMAD4-201ENST00000342988 LRP6O75581 1613 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 STRCQ7RTU9 1775 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 KIAA1549Q9HCM3 1950 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 ERVK11-1P61568 191 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 RSPO2Q6UXX9 243 aaPredicted RBP15.2■□□□□ 0.02
SMAD4-201ENST00000342988 CIARTQ8N365 385 aaPredicted RBP15.2■□□□□ 0.02
SMAD4-201ENST00000342988 SLC25A38Q96DW6 304 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 ST20Q9HBF5 79 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 LILRA1O75019 489 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 RNASE4P34096 147 aaKnown RBP15.2■□□□□ 0.02
SMAD4-201ENST00000342988 PMS2CLQ68D20 193 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 WNT10AQ9GZT5 417 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 FNDC4Q9H6D8 234 aaPredicted RBP15.2■□□□□ 0.02
SMAD4-201ENST00000342988 CEACAM21Q3KPI0 293 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 FDCSPQ8NFU4 85 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 TRIP6Q15654 476 aaKnown RBP15.2■□□□□ 0.02
SMAD4-201ENST00000342988 MARCH11A6NNE9 402 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 IGKV3-20P01619 116 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 ST6GALNAC2Q9UJ37 374 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 A0A1W2PP11 408 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 MGST3O14880 152 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 LEPROTO15243 131 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 PNLIPP16233 465 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 STHQ8IWL8 128 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 SEPSECSQ9HD40 501 aaKnown RBP15.2■□□□□ 0.02
SMAD4-201ENST00000342988 R4GN57 208 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 HBDP02042 147 aa15.2■□□□□ 0.02
SMAD4-201ENST00000342988 TNFRSF9Q07011 255 aa15.19■□□□□ 0.02
SMAD4-201ENST00000342988 OR11H7Q8NGC8 314 aa15.19■□□□□ 0.02
SMAD4-201ENST00000342988 OPN3Q9H1Y3 402 aaPredicted RBP15.19■□□□□ 0.02
SMAD4-201ENST00000342988 LDLRAD4O15165 306 aa15.19■□□□□ 0.02
SMAD4-201ENST00000342988 TMEM229AB2RXF0 380 aa15.19■□□□□ 0.02
SMAD4-201ENST00000342988 PSCAO43653 123 aa15.19■□□□□ 0.02
SMAD4-201ENST00000342988 TSPAN7P41732 249 aa15.19■□□□□ 0.02
SMAD4-201ENST00000342988 SAMD5Q5TGI4 173 aa15.19■□□□□ 0.02
SMAD4-201ENST00000342988 CNRIP1Q96F85 164 aaPredicted RBP15.19■□□□□ 0.02
SMAD4-201ENST00000342988 RIPPLY3P57055 190 aa15.19■□□□□ 0.02
SMAD4-201ENST00000342988 ZNF385AQ96PM9 386 aaKnown RBP15.19■□□□□ 0.02
SMAD4-201ENST00000342988 ZNF729A6NN14 1252 aaPredicted RBP15.19■□□□□ 0.02
SMAD4-201ENST00000342988 LOXL4Q96JB6 756 aa15.19■□□□□ 0.02
SMAD4-201ENST00000342988 GRIFINA4D1Z8 144 aa15.18■□□□□ 0.02
SMAD4-201ENST00000342988 CRYBB3P26998 211 aa15.18■□□□□ 0.02
SMAD4-201ENST00000342988 ADARB2-AS1A8MUL3 147 aa15.18■□□□□ 0.02
SMAD4-201ENST00000342988 P2RY6Q15077 328 aa15.18■□□□□ 0.02
SMAD4-201ENST00000342988 MZB1Q8WU39 189 aa15.18■□□□□ 0.02
SMAD4-201ENST00000342988 CHODLQ9H9P2 273 aa15.18■□□□□ 0.02
SMAD4-201ENST00000342988 FGF12P61328 243 aa15.18■□□□□ 0.02
SMAD4-201ENST00000342988 IGKV3D-20A0A0C4DH25 116 aa15.18■□□□□ 0.02
SMAD4-201ENST00000342988 ANAPC10Q9UM13 185 aa15.18■□□□□ 0.02
SMAD4-201ENST00000342988 GPR132Q9UNW8 380 aa15.18■□□□□ 0.02
SMAD4-201ENST00000342988 LINC00158P58513 81 aa15.18■□□□□ 0.02
SMAD4-201ENST00000342988 FBLN7Q53RD9 439 aa15.18■□□□□ 0.02
SMAD4-201ENST00000342988 C1orf162Q8NEQ5 155 aaPredicted RBP15.18■□□□□ 0.02
SMAD4-201ENST00000342988 TRAV2A0A0B4J234 112 aa15.18■□□□□ 0.02
SMAD4-201ENST00000342988 NHP2Q9NX24 153 aaKnown RBP15.18■□□□□ 0.02
SMAD4-201ENST00000342988 KLKB1P03952 638 aa15.17■□□□□ 0.02
SMAD4-201ENST00000342988 CBLN1P23435 193 aa15.17■□□□□ 0.02
SMAD4-201ENST00000342988 MRM2Q9UI43 246 aaKnown RBP15.17■□□□□ 0.02
SMAD4-201ENST00000342988 LIPT2A6NK58 231 aa15.17■□□□□ 0.02
SMAD4-201ENST00000342988 H3BUT2 72 aa15.17■□□□□ 0.02
SMAD4-201ENST00000342988 FOXH1O75593 365 aa15.17■□□□□ 0.02
SMAD4-201ENST00000342988 ABHD17AQ96GS6 310 aa15.17■□□□□ 0.02
SMAD4-201ENST00000342988 PRR13Q9NZ81 148 aa15.17■□□□□ 0.02
SMAD4-201ENST00000342988 MIC13Q5XKP0 118 aa15.17■□□□□ 0.02
SMAD4-201ENST00000342988 CLEC7AQ9BXN2 247 aa15.17■□□□□ 0.02
SMAD4-201ENST00000342988 TMEM190Q8WZ59 177 aa15.17■□□□□ 0.02
SMAD4-201ENST00000342988 KLK2P20151 261 aa15.17■□□□□ 0.02
SMAD4-201ENST00000342988 UCP2P55851 309 aa15.17■□□□□ 0.02
SMAD4-201ENST00000342988 ARPC1AQ92747 370 aa15.17■□□□□ 0.02
SMAD4-201ENST00000342988 MS4A4AQ96JQ5 239 aa15.17■□□□□ 0.02
SMAD4-201ENST00000342988 CHAC1Q9BUX1 264 aa15.17■□□□□ 0.02
SMAD4-201ENST00000342988 TRAV24A0A0B4J272 114 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 A0A1W2PQD3 144 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 VKORC1Q9BQB6 163 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 INS-IGF2F8WCM5 200 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 INSP01308 110 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 IL11P20809 199 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 PTGDSP41222 190 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 ASCL2Q99929 193 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 WDR54Q9H977 334 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 OR52E5Q8NH55 327 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 LOC105371242A0A075B767 164 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 ZNHIT1O43257 154 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 UBE2WQ96B02 151 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 HYAL3O43820 417 aaPredicted RBP15.16■□□□□ 0.02
SMAD4-201ENST00000342988 ETHE1O95571 254 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 FER1L6-AS1Q8NA97 138 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 MPV17P39210 176 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 OBSL1O75147 1896 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 PQLC2LA1A4F0 135 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 CEACAM8P31997 349 aaPredicted RBP15.16■□□□□ 0.02
SMAD4-201ENST00000342988 PCDH15Q96QU1 1955 aa15.16■□□□□ 0.02
SMAD4-201ENST00000342988 PDLIM4P50479 330 aa15.15■□□□□ 0.02
SMAD4-201ENST00000342988 HIKESHIQ53FT3 197 aa15.15■□□□□ 0.02
SMAD4-201ENST00000342988 DLX4Q92988 240 aaPredicted RBP15.15■□□□□ 0.02
SMAD4-201ENST00000342988 CALYQ9NYX4 217 aa15.15■□□□□ 0.02
SMAD4-201ENST00000342988 IL36BQ9NZH7 164 aa15.15■□□□□ 0.02
SMAD4-201ENST00000342988 PPBPP02775 128 aa15.15■□□□□ 0.02
SMAD4-201ENST00000342988 FRMPD3Q5JV73 1810 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms