RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 STRAPQ9Y3F4 350 aaKnown RBP13.81□□□□□ -0.2
FRMD4A-202ENST00000342409 TEX50A0A1B0GTY4 177 aa13.8□□□□□ -0.2
FRMD4A-202ENST00000342409 TOX4O94842 621 aa13.8□□□□□ -0.2
FRMD4A-202ENST00000342409 CRYGBP07316 175 aa13.8□□□□□ -0.2
FRMD4A-202ENST00000342409 SPP1P10451 314 aa13.8□□□□□ -0.2
FRMD4A-202ENST00000342409 FBLN7Q53RD9 439 aa13.8□□□□□ -0.2
FRMD4A-202ENST00000342409 HSD17B11Q8NBQ5 300 aa13.8□□□□□ -0.2
FRMD4A-202ENST00000342409 AIFM2Q9BRQ8 373 aa13.8□□□□□ -0.2
FRMD4A-202ENST00000342409 ZNF257Q9Y2Q1 563 aa13.8□□□□□ -0.2
FRMD4A-202ENST00000342409 A0A096LNT2 108 aa13.79□□□□□ -0.2
FRMD4A-202ENST00000342409 TIMM23O14925 209 aa13.79□□□□□ -0.2
FRMD4A-202ENST00000342409 HABP2Q14520 560 aaPredicted RBP13.79□□□□□ -0.2
FRMD4A-202ENST00000342409 REG4Q9BYZ8 158 aa13.79□□□□□ -0.2
FRMD4A-202ENST00000342409 HILPDAQ9Y5L2 63 aa13.79□□□□□ -0.2
FRMD4A-202ENST00000342409 CGB1A6NKQ9 187 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 E7EUB6 86 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 SLC25A17O43808 307 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 SEC11BP0C7V7 166 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 ATP6V0CP27449 155 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 SULT1A2P50226 295 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 PAX8Q06710 450 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 SLC38A11Q08AI6 406 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 ZNF266Q14584 549 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 OR8G2PQ6IF36 304 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 PSMG3-AS1Q96PY0 264 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 ZNF430Q9H8G1 570 aaPredicted RBP13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 GCN1Q92616 2671 aaKnown RBP13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 A0A1B0GW64 132 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 TEX46H3BTG2 121 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 RRHO14718 337 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 OPN1MWP04001 364 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 OPN1MW2P0DN77 364 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 OPN1MW3P0DN78 364 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 USF1P22415 310 aaPredicted RBP13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 LGALS7P47929 136 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 PRCDQ00LT1 54 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 RUNX1Q01196 453 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 PJVKQ0ZLH3 352 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 HIST2H2BCQ6DN03 193 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 COMMD7Q86VX2 200 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 OR4A5Q8NH83 315 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 HEYLQ9NQ87 328 aaPredicted RBP13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 MED9Q9NWA0 146 aa13.78□□□□□ -0.2
FRMD4A-202ENST00000342409 NAV2Q8IVL1 2488 aa13.77□□□□□ -0.2
FRMD4A-202ENST00000342409 PRSS46E5RG02 174 aa13.77□□□□□ -0.21
FRMD4A-202ENST00000342409 DFFBO76075 338 aa13.77□□□□□ -0.21
FRMD4A-202ENST00000342409 VENTXO95231 258 aa13.77□□□□□ -0.21
FRMD4A-202ENST00000342409 FGF2P09038 288 aa13.77□□□□□ -0.21
FRMD4A-202ENST00000342409 DSCR9P59020 149 aa13.77□□□□□ -0.21
FRMD4A-202ENST00000342409 RPL8P62917 257 aaKnown RBP13.77□□□□□ -0.21
FRMD4A-202ENST00000342409 PSG5Q15238 335 aa13.77□□□□□ -0.21
FRMD4A-202ENST00000342409 CLEC12BQ2HXU8 276 aa13.77□□□□□ -0.21
FRMD4A-202ENST00000342409 RNF141Q8WVD5 230 aa13.77□□□□□ -0.21
FRMD4A-202ENST00000342409 CACFD1Q9UGQ2 172 aa13.77□□□□□ -0.21
FRMD4A-202ENST00000342409 ZANQ9Y493 2812 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 LY86O95711 162 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 CD1BP29016 333 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 HOXA1P49639 335 aaPredicted RBP13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 UBE2E1P51965 193 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 HBG1P69891 147 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 HBG2P69892 147 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 VMA21Q3ZAQ7 101 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 C10orf55Q5SWW7 151 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 VSTM2AQ8TAG5 236 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 TSNAXQ99598 290 aaKnown RBP13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 NDUFA4L2Q9NRX3 87 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 CEACAM3P40198 252 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 MINOS1Q5TGZ0 78 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 EIF5AL1Q6IS14 154 aaKnown RBP13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 TEX45Q8NA69 505 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 OR10W1Q8NGF6 305 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 OR5B3Q8NH48 314 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 HINT2Q9BX68 163 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 HIPK2Q9H2X6 1198 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 FKBP11Q9NYL4 201 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 MINOS1-NBL1R4GNA1 71 aa13.76□□□□□ -0.21
FRMD4A-202ENST00000342409 SSX2Q16385 188 aa13.75□□□□□ -0.21
FRMD4A-202ENST00000342409 VWC2Q2TAL6 325 aa13.75□□□□□ -0.21
FRMD4A-202ENST00000342409 LRRC75BQ2VPJ9 315 aa13.75□□□□□ -0.21
FRMD4A-202ENST00000342409 LILRB2Q8N423 598 aa13.75□□□□□ -0.21
FRMD4A-202ENST00000342409 CITED4Q96RK1 184 aa13.75□□□□□ -0.21
FRMD4A-202ENST00000342409 ZFHX3Q15911 3703 aa13.74□□□□□ -0.21
FRMD4A-202ENST00000342409 MFSD2BA6NFX1 497 aa13.74□□□□□ -0.21
FRMD4A-202ENST00000342409 CA2P00918 260 aa13.74□□□□□ -0.21
FRMD4A-202ENST00000342409 IFNA10P01566 189 aa13.74□□□□□ -0.21
FRMD4A-202ENST00000342409 MDKP21741 143 aaPredicted RBP13.74□□□□□ -0.21
FRMD4A-202ENST00000342409 CD24P25063 80 aa13.74□□□□□ -0.21
FRMD4A-202ENST00000342409 SSBP2P81877 361 aaPredicted RBP13.74□□□□□ -0.21
FRMD4A-202ENST00000342409 PRSS8Q16651 343 aa13.74□□□□□ -0.21
FRMD4A-202ENST00000342409 BSXQ3C1V8 233 aa13.74□□□□□ -0.21
FRMD4A-202ENST00000342409 OR1L8Q8NGR8 309 aa13.74□□□□□ -0.21
FRMD4A-202ENST00000342409 LRRC20Q8TCA0 184 aa13.74□□□□□ -0.21
FRMD4A-202ENST00000342409 PARD6GQ9BYG4 376 aaPredicted RBP13.74□□□□□ -0.21
FRMD4A-202ENST00000342409 SIGLEC9Q9Y336 463 aa13.74□□□□□ -0.21
FRMD4A-202ENST00000342409 CENPVL3A0A0U1RRI6 287 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 ZNF705EA8MWA4 302 aaPredicted RBP13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 OOSP1A8MZH6 123 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 SLC25A16P16260 332 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 F2RL1P55085 397 aa13.73□□□□□ -0.21
FRMD4A-202ENST00000342409 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms