RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 TOLLIPQ9H0E2 274 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 AKAP6Q13023 2319 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 MLNRO43193 412 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 MBPP02686 304 aaPredicted RBP10.64□□□□□ -0.71
LIN54-201ENST00000340417 Q8NA96 180 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 ANGPTL6Q8NI99 470 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 SLC25A38Q96DW6 304 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 GAB2Q9UQC2 676 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 PXMP4Q9Y6I8 212 aa10.64□□□□□ -0.71
LIN54-201ENST00000340417 IGHV1-69DA0A0B4J2H0 117 aa10.63□□□□□ -0.71
LIN54-201ENST00000340417 IGHV1-69P01742 117 aa10.63□□□□□ -0.71
LIN54-201ENST00000340417 TNFRSF9Q07011 255 aa10.63□□□□□ -0.71
LIN54-201ENST00000340417 SPSB4Q96A44 273 aa10.63□□□□□ -0.71
LIN54-201ENST00000340417 PIEZO1Q92508 2521 aa10.63□□□□□ -0.71
LIN54-201ENST00000340417 IGHV2-70DA0A0C4DH43 119 aa10.63□□□□□ -0.71
LIN54-201ENST00000340417 TEX38Q6PEX7 206 aa10.63□□□□□ -0.71
LIN54-201ENST00000340417 STHQ8IWL8 128 aa10.63□□□□□ -0.71
LIN54-201ENST00000340417 FAM110DQ8TAY7 271 aaPredicted RBP10.63□□□□□ -0.71
LIN54-201ENST00000340417 ZGRF1Q86YA3 2104 aa10.63□□□□□ -0.71
LIN54-201ENST00000340417 IGKV1-9A0A0C4DH69 117 aa10.63□□□□□ -0.71
LIN54-201ENST00000340417 C17orf98A8MV24 154 aa10.63□□□□□ -0.71
LIN54-201ENST00000340417 HTN3P15516 51 aa10.63□□□□□ -0.71
LIN54-201ENST00000340417 SPNP16150 400 aa10.63□□□□□ -0.71
LIN54-201ENST00000340417 C5orf17Q8NAS9 161 aa10.63□□□□□ -0.71
LIN54-201ENST00000340417 SRSF12Q8WXF0 261 aaKnown RBP10.63□□□□□ -0.71
LIN54-201ENST00000340417 GATCO43716 136 aaKnown RBP10.63□□□□□ -0.71
LIN54-201ENST00000340417 SAA1P0DJI8 122 aaPredicted RBP10.63□□□□□ -0.71
LIN54-201ENST00000340417 PSG9Q00887 426 aa10.63□□□□□ -0.71
LIN54-201ENST00000340417 ZNF439Q8NDP4 499 aa10.63□□□□□ -0.71
LIN54-201ENST00000340417 PRTN3P24158 256 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 HIST1H1AQ02539 215 aaPredicted RBP10.62□□□□□ -0.71
LIN54-201ENST00000340417 LDLRAD2Q5SZI1 272 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 ZNF362Q5T0B9 420 aaPredicted RBP10.62□□□□□ -0.71
LIN54-201ENST00000340417 V9GYH0 126 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 SLC31A2O15432 143 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 PLAURQ03405 335 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 PRNTQ86SH4 94 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 HS3ST6Q96QI5 342 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 GPR132Q9UNW8 380 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 FAM90A26D6RGX4 464 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 ETV2O00321 342 aaPredicted RBP10.62□□□□□ -0.71
LIN54-201ENST00000340417 UCP3P55916 312 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 LCNL1Q6ZST4 164 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 URGCP-MRPS24S4R325 110 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 OR9G9P0C7N8 305 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 CD200R1LQ6Q8B3 271 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 SYT8Q8NBV8 401 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 IGHV3OR16-8A0A075B7F1 116 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 IGHV1-3A0A0C4DH29 117 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 OR2T8A6NH00 312 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 NDUFS7O75251 213 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 CXorf1O96002 111 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 FBLIM1Q8WUP2 373 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 BOLA1Q9Y3E2 137 aa10.62□□□□□ -0.71
LIN54-201ENST00000340417 ROS1P08922 2347 aa10.61□□□□□ -0.71
LIN54-201ENST00000340417 ZNF705FA8MVS1 300 aaPredicted RBP10.61□□□□□ -0.71
LIN54-201ENST00000340417 ZNF705DP0CH99 300 aaPredicted RBP10.61□□□□□ -0.71
LIN54-201ENST00000340417 ZNF705BP0CI00 300 aaPredicted RBP10.61□□□□□ -0.71
LIN54-201ENST00000340417 EMP1P54849 157 aa10.61□□□□□ -0.71
LIN54-201ENST00000340417 DAZAP2Q15038 168 aaPredicted RBP10.61□□□□□ -0.71
LIN54-201ENST00000340417 LGALSLQ3ZCW2 172 aaPredicted RBP10.61□□□□□ -0.71
LIN54-201ENST00000340417 TEX45Q8NA69 505 aa10.61□□□□□ -0.71
LIN54-201ENST00000340417 PNRC2Q9NPJ4 139 aaKnown RBP10.61□□□□□ -0.71
LIN54-201ENST00000340417 SIGLECL1Q8N7X8 197 aa10.61□□□□□ -0.71
LIN54-201ENST00000340417 ALPK3Q96L96 1907 aa10.61□□□□□ -0.71
LIN54-201ENST00000340417 SHISA9B4DS77 424 aa10.61□□□□□ -0.71
LIN54-201ENST00000340417 GPX1P07203 203 aa10.61□□□□□ -0.71
LIN54-201ENST00000340417 FAM157CP0CG43 387 aa10.61□□□□□ -0.71
LIN54-201ENST00000340417 UBE2E1P51965 193 aa10.61□□□□□ -0.71
LIN54-201ENST00000340417 SRSF7Q16629 238 aaKnown RBP eCLIP10.61□□□□□ -0.71
LIN54-201ENST00000340417 C20orf202A1L168 122 aa10.61□□□□□ -0.71
LIN54-201ENST00000340417 HIST1H3AP68431 136 aa10.61□□□□□ -0.71
LIN54-201ENST00000340417 FOXL2NBQ6ZUU3 175 aa10.61□□□□□ -0.71
LIN54-201ENST00000340417 ZNF329Q86UD4 541 aa10.61□□□□□ -0.71
LIN54-201ENST00000340417 DEDDO75618 318 aa10.6□□□□□ -0.71
LIN54-201ENST00000340417 P2RY4P51582 365 aa10.6□□□□□ -0.71
LIN54-201ENST00000340417 ATP5IP56385 69 aaPredicted RBP10.6□□□□□ -0.71
LIN54-201ENST00000340417 OR51G1Q8NGK1 321 aa10.6□□□□□ -0.71
LIN54-201ENST00000340417 FER1L5A0AVI2 2057 aa10.6□□□□□ -0.71
LIN54-201ENST00000340417 MPDU1O75352 247 aa10.6□□□□□ -0.71
LIN54-201ENST00000340417 IGFBP3P17936 291 aaPredicted RBP10.6□□□□□ -0.71
LIN54-201ENST00000340417 OR5AU1Q8NGC0 362 aa10.6□□□□□ -0.71
LIN54-201ENST00000340417 BUB1B-PAK6H3BSN5 160 aa10.6□□□□□ -0.71
LIN54-201ENST00000340417 RAB5AP20339 215 aa10.6□□□□□ -0.71
LIN54-201ENST00000340417 IGSF23A1L1A6 192 aa10.6□□□□□ -0.71
LIN54-201ENST00000340417 SPANXN1Q5VSR9 72 aa10.6□□□□□ -0.71
LIN54-201ENST00000340417 MANBALQ9NQG1 85 aa10.6□□□□□ -0.71
LIN54-201ENST00000340417 GOLT1BQ9Y3E0 138 aa10.6□□□□□ -0.71
LIN54-201ENST00000340417 PCNX1Q96RV3 2341 aa10.6□□□□□ -0.71
LIN54-201ENST00000340417 TMSB15BA0A087X1C1 80 aa10.6□□□□□ -0.71
LIN54-201ENST00000340417 OR4C46A6NHA9 309 aa10.6□□□□□ -0.71
LIN54-201ENST00000340417 FOXB2Q5VYV0 432 aa10.6□□□□□ -0.71
LIN54-201ENST00000340417 MMP9P14780 707 aa10.59□□□□□ -0.71
LIN54-201ENST00000340417 IGKV1D-17A0A075B6S4 117 aa10.59□□□□□ -0.71
LIN54-201ENST00000340417 IGLV1-44P01699 117 aa10.59□□□□□ -0.71
LIN54-201ENST00000340417 MELTFP08582 738 aa10.59□□□□□ -0.71
LIN54-201ENST00000340417 CADM3Q8N126 398 aa10.59□□□□□ -0.71
LIN54-201ENST00000340417 RSG1Q9BU20 258 aa10.59□□□□□ -0.71
LIN54-201ENST00000340417 DNAJC4Q9NNZ3 241 aa10.59□□□□□ -0.71
LIN54-201ENST00000340417 PPP5D1E7EU14 171 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms