RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 SURF2Q15527 256 aaPredicted RBP11.85□□□□□ -0.51
UBE3B-201ENST00000340074 CCDC71LQ8N9Z2 235 aa11.85□□□□□ -0.51
UBE3B-201ENST00000340074 FYTTD1Q96QD9 318 aaKnown RBP11.85□□□□□ -0.51
UBE3B-201ENST00000340074 TP53RKQ96S44 253 aa11.85□□□□□ -0.51
UBE3B-201ENST00000340074 C5orf66Q9H5L9 145 aa11.85□□□□□ -0.51
UBE3B-201ENST00000340074 SLA2Q9H6Q3 261 aa11.85□□□□□ -0.51
UBE3B-201ENST00000340074 COA4Q9NYJ1 87 aa11.85□□□□□ -0.51
UBE3B-201ENST00000340074 GPR132Q9UNW8 380 aa11.85□□□□□ -0.51
UBE3B-201ENST00000340074 C14orf166Q9Y224 244 aaKnown RBP11.85□□□□□ -0.51
UBE3B-201ENST00000340074 NOTCH3Q9UM47 2321 aa11.84□□□□□ -0.51
UBE3B-201ENST00000340074 C3orf85A0A1B0GTC6 90 aa11.84□□□□□ -0.51
UBE3B-201ENST00000340074 A0A1B0GW64 132 aa11.84□□□□□ -0.51
UBE3B-201ENST00000340074 TEX22C9J3V5 150 aa11.84□□□□□ -0.51
UBE3B-201ENST00000340074 I3L521 148 aa11.84□□□□□ -0.51
UBE3B-201ENST00000340074 SERPINE2P07093 398 aa11.84□□□□□ -0.51
UBE3B-201ENST00000340074 OR9G9P0C7N8 305 aa11.84□□□□□ -0.51
UBE3B-201ENST00000340074 FAUP35544 74 aaKnown RBP11.84□□□□□ -0.51
UBE3B-201ENST00000340074 MYCNOSP40205 109 aa11.84□□□□□ -0.51
UBE3B-201ENST00000340074 BAK1Q16611 211 aa11.84□□□□□ -0.51
UBE3B-201ENST00000340074 CNPY1Q3B7I2 92 aa11.84□□□□□ -0.51
UBE3B-201ENST00000340074 MRPL41Q8IXM3 137 aaKnown RBP11.84□□□□□ -0.51
UBE3B-201ENST00000340074 LINC00482Q8N8I6 264 aa11.84□□□□□ -0.51
UBE3B-201ENST00000340074 GDPD1Q8N9F7 314 aa11.84□□□□□ -0.51
UBE3B-201ENST00000340074 ADAD2Q8NCV1 583 aaKnown RBP11.84□□□□□ -0.51
UBE3B-201ENST00000340074 P2RX4Q99571 388 aa11.84□□□□□ -0.51
UBE3B-201ENST00000340074 SDHCQ99643 169 aaPredicted RBP11.84□□□□□ -0.51
UBE3B-201ENST00000340074 NOTCH1P46531 2555 aa11.83□□□□□ -0.52
UBE3B-201ENST00000340074 CGB1A6NKQ9 187 aa11.83□□□□□ -0.52
UBE3B-201ENST00000340074 H3BUA1 57 aa11.83□□□□□ -0.52
UBE3B-201ENST00000340074 SP6Q3SY56 376 aa11.83□□□□□ -0.52
UBE3B-201ENST00000340074 ZNF57Q68EA5 555 aaPredicted RBP11.83□□□□□ -0.52
UBE3B-201ENST00000340074 TTC9CQ8N5M4 171 aa11.83□□□□□ -0.52
UBE3B-201ENST00000340074 WFDC9Q8NEX5 89 aa11.83□□□□□ -0.52
UBE3B-201ENST00000340074 SEC22AQ96IW7 307 aa11.83□□□□□ -0.52
UBE3B-201ENST00000340074 COMMD5Q9GZQ3 224 aa11.83□□□□□ -0.52
UBE3B-201ENST00000340074 ALX4Q9H161 411 aaPredicted RBP11.83□□□□□ -0.52
UBE3B-201ENST00000340074 NSG2Q9Y328 171 aa11.83□□□□□ -0.52
UBE3B-201ENST00000340074 IGHV3-11P01762 117 aa11.82□□□□□ -0.52
UBE3B-201ENST00000340074 PRH1P02810 166 aa11.82□□□□□ -0.52
UBE3B-201ENST00000340074 FGF2P09038 288 aa11.82□□□□□ -0.52
UBE3B-201ENST00000340074 OR2B8PP59922 312 aa11.82□□□□□ -0.52
UBE3B-201ENST00000340074 RUNX1Q01196 453 aa11.82□□□□□ -0.52
UBE3B-201ENST00000340074 CADM3Q8N126 398 aa11.82□□□□□ -0.52
UBE3B-201ENST00000340074 OR11H1Q8NG94 326 aa11.82□□□□□ -0.52
UBE3B-201ENST00000340074 TEX13DA0A0J9YY54 714 aaPredicted RBP11.81□□□□□ -0.52
UBE3B-201ENST00000340074 G3V4G9 280 aa11.81□□□□□ -0.52
UBE3B-201ENST00000340074 RBMXL2O75526 392 aaKnown RBP11.81□□□□□ -0.52
UBE3B-201ENST00000340074 SNAPC5O75971 98 aa11.81□□□□□ -0.52
UBE3B-201ENST00000340074 BRI3O95415 125 aa11.81□□□□□ -0.52
UBE3B-201ENST00000340074 OR5AC1P0C628 307 aa11.81□□□□□ -0.52
UBE3B-201ENST00000340074 AREGP15514 252 aa11.81□□□□□ -0.52
UBE3B-201ENST00000340074 RAB25P57735 213 aa11.81□□□□□ -0.52
UBE3B-201ENST00000340074 DEFA5Q01523 94 aa11.81□□□□□ -0.52
UBE3B-201ENST00000340074 ZNF45Q02386 682 aa11.81□□□□□ -0.52
UBE3B-201ENST00000340074 TRIQKQ629K1 86 aa11.81□□□□□ -0.52
UBE3B-201ENST00000340074 H2BFWTQ7Z2G1 175 aa11.81□□□□□ -0.52
UBE3B-201ENST00000340074 C1QL4Q86Z23 238 aa11.81□□□□□ -0.52
UBE3B-201ENST00000340074 DEDD2Q8WXF8 326 aa11.81□□□□□ -0.52
UBE3B-201ENST00000340074 SCGB3A2Q96PL1 93 aa11.81□□□□□ -0.52
UBE3B-201ENST00000340074 NAA60Q9H7X0 242 aa11.81□□□□□ -0.52
UBE3B-201ENST00000340074 ZNF257Q9Y2Q1 563 aa11.81□□□□□ -0.52
UBE3B-201ENST00000340074 TEX50A0A1B0GTY4 177 aa11.8□□□□□ -0.52
UBE3B-201ENST00000340074 C13orf42A0A1B0GVH6 325 aa11.8□□□□□ -0.52
UBE3B-201ENST00000340074 CRYM-AS1A6NIL9 109 aa11.8□□□□□ -0.52
UBE3B-201ENST00000340074 LGALS1P09382 135 aaKnown RBP11.8□□□□□ -0.52
UBE3B-201ENST00000340074 IGLL1P15814 213 aa11.8□□□□□ -0.52
UBE3B-201ENST00000340074 UCP1P25874 307 aa11.8□□□□□ -0.52
UBE3B-201ENST00000340074 INPP1P49441 399 aa11.8□□□□□ -0.52
UBE3B-201ENST00000340074 FHL3Q13643 280 aa11.8□□□□□ -0.52
UBE3B-201ENST00000340074 TRIM16LQ309B1 348 aa11.8□□□□□ -0.52
UBE3B-201ENST00000340074 OXLD1Q5BKU9 147 aa11.8□□□□□ -0.52
UBE3B-201ENST00000340074 C19orf35Q6ZS72 473 aa11.8□□□□□ -0.52
UBE3B-201ENST00000340074 SLC25A42Q86VD7 318 aa11.8□□□□□ -0.52
UBE3B-201ENST00000340074 OR1N2Q8NGR9 330 aa11.8□□□□□ -0.52
UBE3B-201ENST00000340074 QTRT1Q9BXR0 403 aaKnown RBP11.8□□□□□ -0.52
UBE3B-201ENST00000340074 OR51B2Q9Y5P1 312 aa11.8□□□□□ -0.52
UBE3B-201ENST00000340074 MEGF8Q7Z7M0 2845 aa11.8□□□□□ -0.52
UBE3B-201ENST00000340074 A0A0G2JLM5 398 aa11.79□□□□□ -0.52
UBE3B-201ENST00000340074 DBX1A6NMT0 343 aa11.79□□□□□ -0.52
UBE3B-201ENST00000340074 NPIPB5A8MRT5 1133 aa11.79□□□□□ -0.52
UBE3B-201ENST00000340074 B3GALNT1O75752 331 aa11.79□□□□□ -0.52
UBE3B-201ENST00000340074 IGKV1-5P01602 117 aa11.79□□□□□ -0.52
UBE3B-201ENST00000340074 REG1AP05451 166 aa11.79□□□□□ -0.52
UBE3B-201ENST00000340074 PSMB6P28072 239 aa11.79□□□□□ -0.52
UBE3B-201ENST00000340074 ZNF616Q08AN1 781 aa11.79□□□□□ -0.52
UBE3B-201ENST00000340074 SAMD5Q5TGI4 173 aa11.79□□□□□ -0.52
UBE3B-201ENST00000340074 OR10W1Q8NGF6 305 aa11.79□□□□□ -0.52
UBE3B-201ENST00000340074 OR1L8Q8NGR8 309 aa11.79□□□□□ -0.52
UBE3B-201ENST00000340074 GLYATL2Q8WU03 294 aa11.79□□□□□ -0.52
UBE3B-201ENST00000340074 TMEM230Q96A57 120 aa11.79□□□□□ -0.52
UBE3B-201ENST00000340074 TSC22D3Q99576 134 aa11.79□□□□□ -0.52
UBE3B-201ENST00000340074 TMEM222Q9H0R3 208 aa11.79□□□□□ -0.52
UBE3B-201ENST00000340074 TMEM14BQ9NUH8 114 aa11.79□□□□□ -0.52
UBE3B-201ENST00000340074 PRNDQ9UKY0 176 aa11.79□□□□□ -0.52
UBE3B-201ENST00000340074 IGHV4OR15-8A0A075B7B6 117 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 A0A087WW49 117 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 TRBV9A0A0B4J1U6 114 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 IGLC7A0M8Q6 106 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 C15orf61A6NNL5 157 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 CRYGCP07315 174 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms