RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 IDI2-AS1Q9NZ38 188 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 A0A1W2PRD5 423 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 A0A1W2PRF3 423 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 A0A1W2PRM7 423 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 BTBD17A6NE02 478 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 FAM90A26D6RGX4 464 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 WNT2P09544 360 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 IGFBP2P18065 325 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 CHRNA7P36544 502 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 CDC34P49427 236 aaPredicted RBP7.24□□□□□ -1.25
SNCA-201ENST00000336904 PRSS8Q16651 343 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 TMEM200BQ69YZ2 307 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 SPNS3Q6ZMD2 512 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 MRGPRGQ86SM5 289 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 PINX1Q96BK5 328 aaKnown RBP7.24□□□□□ -1.25
SNCA-201ENST00000336904 HIPK2Q9H2X6 1198 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 PARLQ9H300 379 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 SEPSECSQ9HD40 501 aaKnown RBP7.24□□□□□ -1.25
SNCA-201ENST00000336904 SLC35D1Q9NTN3 355 aa7.24□□□□□ -1.25
SNCA-201ENST00000336904 SPG11Q96JI7 2443 aa7.23□□□□□ -1.25
SNCA-201ENST00000336904 A0A1B0GWJ7 208 aa7.23□□□□□ -1.25
SNCA-201ENST00000336904 ARL14EPLP0DKL9 152 aa7.23□□□□□ -1.25
SNCA-201ENST00000336904 NPPCP23582 126 aa7.23□□□□□ -1.25
SNCA-201ENST00000336904 SERF2P84101 59 aa7.23□□□□□ -1.25
SNCA-201ENST00000336904 PDLIM3Q53GG5 364 aaPredicted RBP7.23□□□□□ -1.25
SNCA-201ENST00000336904 CDPF1Q6NVV7 123 aa7.23□□□□□ -1.25
SNCA-201ENST00000336904 HEPN1Q6WQI6 88 aa7.23□□□□□ -1.25
SNCA-201ENST00000336904 OR4S2Q8NH73 311 aa7.23□□□□□ -1.25
SNCA-201ENST00000336904 DDB2Q92466 427 aa7.23□□□□□ -1.25
SNCA-201ENST00000336904 C1orf159Q96HA4 380 aa7.23□□□□□ -1.25
SNCA-201ENST00000336904 CISD1Q9NZ45 108 aaKnown RBP7.23□□□□□ -1.25
SNCA-201ENST00000336904 VAX2Q9UIW0 290 aa7.23□□□□□ -1.25
SNCA-201ENST00000336904 OR51B2Q9Y5P1 312 aa7.23□□□□□ -1.25
SNCA-201ENST00000336904 PXMP4Q9Y6I8 212 aa7.23□□□□□ -1.25
SNCA-201ENST00000336904 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.23□□□□□ -1.25
SNCA-201ENST00000336904 DVL1O14640 695 aa7.23□□□□□ -1.25
SNCA-201ENST00000336904 NDUFA2O43678 99 aa7.23□□□□□ -1.25
SNCA-201ENST00000336904 ENSAO43768 121 aaKnown RBP7.23□□□□□ -1.25
SNCA-201ENST00000336904 SAA1P0DJI8 122 aaPredicted RBP7.23□□□□□ -1.25
SNCA-201ENST00000336904 VDAC2P45880 294 aaPredicted RBP7.23□□□□□ -1.25
SNCA-201ENST00000336904 SSBP2P81877 361 aaPredicted RBP7.23□□□□□ -1.25
SNCA-201ENST00000336904 ZNF114Q8NC26 417 aa7.23□□□□□ -1.25
SNCA-201ENST00000336904 MBD3L1Q8WWY6 194 aa7.23□□□□□ -1.25
SNCA-201ENST00000336904 DOK5Q9P104 306 aa7.23□□□□□ -1.25
SNCA-201ENST00000336904 A0A1W2PPV4 95 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 C11orf94C9JXX5 98 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 AGAP20933 346 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 SPCS3P61009 180 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 C16orf82Q7Z2V1 217 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 FAM169BQ8N8A8 192 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 GAB2Q9UQC2 676 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 PPIAL4EA0A075B759 164 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 CTXND1A0A1B0GTU2 59 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 PPIAL4DF5H284 164 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 J3QR06 171 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 NDUFB4O95168 129 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 PPIAL4FP0DN26 164 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 NPY1RP25929 384 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 CFHR2P36980 270 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 PSMB3P49720 205 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 TRAT1Q6PIZ9 186 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 DMRTC2Q8IXT2 367 aaPredicted RBP7.22□□□□□ -1.25
SNCA-201ENST00000336904 ZNF439Q8NDP4 499 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 SLC24A4Q8NFF2 622 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 OR10X1Q8NGY0 326 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 FAM222BQ8WU58 562 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 HARBI1Q96MB7 349 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 CIB3Q96Q77 187 aaPredicted RBP7.22□□□□□ -1.25
SNCA-201ENST00000336904 ACTR3CQ9C0K3 210 aaPredicted RBP7.22□□□□□ -1.25
SNCA-201ENST00000336904 TMEM106BQ9NUM4 274 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 RPUSD1Q9UJJ7 312 aaKnown RBP7.22□□□□□ -1.25
SNCA-201ENST00000336904 PPIAL4AQ9Y536 164 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 CENPEQ02224 2701 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 A0A1B0GW64 132 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 C15orf61A6NNL5 157 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 SHISA9B4DS77 424 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 OR10J4P0C629 311 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 COX7A1P24310 79 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 CD24P25063 80 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 CNTFRP26992 372 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 GATA4P43694 442 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 FAM3BP58499 235 aaPredicted RBP7.22□□□□□ -1.25
SNCA-201ENST00000336904 RNASE6Q93091 150 aaKnown RBP7.22□□□□□ -1.25
SNCA-201ENST00000336904 ACY3Q96HD9 319 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 YPEL4Q96NS1 127 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 GGTLC1Q9BX51 225 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 TOLLIPQ9H0E2 274 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 SDF2L1Q9HCN8 221 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 ENY2Q9NPA8 101 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 TUBG2Q9NRH3 451 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 LAMP3Q9UQV4 416 aa7.22□□□□□ -1.25
SNCA-201ENST00000336904 A0A1W2PPQ1 181 aa7.21□□□□□ -1.25
SNCA-201ENST00000336904 C5orf52A6NGY3 159 aa7.21□□□□□ -1.25
SNCA-201ENST00000336904 NKX6-3A6NJ46 265 aa7.21□□□□□ -1.25
SNCA-201ENST00000336904 TMEM178BH3BS89 294 aa7.21□□□□□ -1.25
SNCA-201ENST00000336904 SIAH2O43255 324 aa7.21□□□□□ -1.25
SNCA-201ENST00000336904 CLN5O75503 358 aa7.21□□□□□ -1.25
SNCA-201ENST00000336904 TNFRSF1AP19438 455 aa7.21□□□□□ -1.25
SNCA-201ENST00000336904 THBS3P49746 956 aa7.21□□□□□ -1.25
SNCA-201ENST00000336904 PRR31Q5SQ13 230 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms