RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 GALR1P47211 349 aa13.33□□□□□ -0.27
SYNM-201ENST00000328642 KBTBD11-OT1A0A1B0GTJ5 212 aa13.33□□□□□ -0.28
SYNM-201ENST00000328642 J3QW42 95 aa13.33□□□□□ -0.28
SYNM-201ENST00000328642 CA2P00918 260 aa13.33□□□□□ -0.28
SYNM-201ENST00000328642 FABP4P15090 132 aa13.33□□□□□ -0.28
SYNM-201ENST00000328642 MPZP25189 248 aa13.33□□□□□ -0.28
SYNM-201ENST00000328642 RPL8P62917 257 aaKnown RBP13.33□□□□□ -0.28
SYNM-201ENST00000328642 ATP6V1FQ16864 119 aa13.33□□□□□ -0.28
SYNM-201ENST00000328642 LILRB1Q8NHL6 650 aaPredicted RBP13.33□□□□□ -0.28
SYNM-201ENST00000328642 JMJD1CQ15652 2540 aa13.33□□□□□ -0.28
SYNM-201ENST00000328642 CTXND1A0A1B0GTU2 59 aa13.33□□□□□ -0.28
SYNM-201ENST00000328642 IFNL4K9M1U5 179 aa13.33□□□□□ -0.28
SYNM-201ENST00000328642 HSPE1P61604 102 aaKnown RBP13.33□□□□□ -0.28
SYNM-201ENST00000328642 OR4A47Q6IF82 309 aa13.33□□□□□ -0.28
SYNM-201ENST00000328642 OR4D5Q8NGN0 318 aa13.33□□□□□ -0.28
SYNM-201ENST00000328642 GATAD1Q8WUU5 269 aa13.33□□□□□ -0.28
SYNM-201ENST00000328642 LURAP1Q96LR2 239 aa13.33□□□□□ -0.28
SYNM-201ENST00000328642 NPVFQ9HCQ7 196 aa13.33□□□□□ -0.28
SYNM-201ENST00000328642 PRNDQ9UKY0 176 aa13.33□□□□□ -0.28
SYNM-201ENST00000328642 IGHV3OR16-13A0A075B7E8 117 aa13.32□□□□□ -0.28
SYNM-201ENST00000328642 IGHV3-74A0A0B4J1X5 117 aa13.32□□□□□ -0.28
SYNM-201ENST00000328642 RND2P52198 227 aa13.32□□□□□ -0.28
SYNM-201ENST00000328642 DNM1P46Q6ZS02 220 aa13.32□□□□□ -0.28
SYNM-201ENST00000328642 OR10D4PQ8NGN7 298 aa13.32□□□□□ -0.28
SYNM-201ENST00000328642 MOSP00540 346 aa13.32□□□□□ -0.28
SYNM-201ENST00000328642 IGLV3-1P01715 115 aa13.32□□□□□ -0.28
SYNM-201ENST00000328642 ECSCRQ19T08 205 aa13.32□□□□□ -0.28
SYNM-201ENST00000328642 OR10W1Q8NGF6 305 aa13.32□□□□□ -0.28
SYNM-201ENST00000328642 SLC25A5P05141 298 aaKnown RBP13.32□□□□□ -0.28
SYNM-201ENST00000328642 CAMPP49913 170 aa13.32□□□□□ -0.28
SYNM-201ENST00000328642 RNF212Q495C1 297 aa13.32□□□□□ -0.28
SYNM-201ENST00000328642 NPIPB3Q92617 1050 aa13.32□□□□□ -0.28
SYNM-201ENST00000328642 LSM10Q969L4 123 aaKnown RBP13.32□□□□□ -0.28
SYNM-201ENST00000328642 WDR61Q9GZS3 305 aaKnown RBP13.32□□□□□ -0.28
SYNM-201ENST00000328642 AUP1Q9Y679 476 aa13.32□□□□□ -0.28
SYNM-201ENST00000328642 SORL1Q92673 2214 aa13.32□□□□□ -0.28
SYNM-201ENST00000328642 LRP4O75096 1905 aa13.32□□□□□ -0.28
SYNM-201ENST00000328642 RAB5AP20339 215 aa13.31□□□□□ -0.28
SYNM-201ENST00000328642 UCNP55089 124 aa13.31□□□□□ -0.28
SYNM-201ENST00000328642 KLRB1Q12918 225 aa13.31□□□□□ -0.28
SYNM-201ENST00000328642 LYPD2Q6UXB3 125 aa13.31□□□□□ -0.28
SYNM-201ENST00000328642 OR51G1Q8NGK1 321 aa13.31□□□□□ -0.28
SYNM-201ENST00000328642 RNASE6Q93091 150 aaKnown RBP13.31□□□□□ -0.28
SYNM-201ENST00000328642 FBXL15Q9H469 300 aa13.31□□□□□ -0.28
SYNM-201ENST00000328642 METTL1Q9UBP6 276 aaKnown RBP13.31□□□□□ -0.28
SYNM-201ENST00000328642 MBD3L4A6NDZ8 208 aaPredicted RBP13.31□□□□□ -0.28
SYNM-201ENST00000328642 MBD3L3A6NE82 208 aaPredicted RBP13.31□□□□□ -0.28
SYNM-201ENST00000328642 MBD3L5A6NJ08 208 aaPredicted RBP13.31□□□□□ -0.28
SYNM-201ENST00000328642 APOBEC3AP31941 199 aaPredicted RBP13.31□□□□□ -0.28
SYNM-201ENST00000328642 MBD3L2Q8NHZ7 208 aaPredicted RBP13.31□□□□□ -0.28
SYNM-201ENST00000328642 ABCA12Q86UK0 2595 aa13.31□□□□□ -0.28
SYNM-201ENST00000328642 TM4SF5O14894 197 aa13.31□□□□□ -0.28
SYNM-201ENST00000328642 KBTBD11O94819 623 aa13.31□□□□□ -0.28
SYNM-201ENST00000328642 LCN2P80188 198 aa13.31□□□□□ -0.28
SYNM-201ENST00000328642 MEF2BQ02080 365 aaPredicted RBP13.31□□□□□ -0.28
SYNM-201ENST00000328642 PGPEP1LA6NFU8 196 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 ARL16Q0P5N6 197 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 ASCL4Q6XD76 172 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 ZNF525Q8N782 197 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 IGFBPL1Q8WX77 278 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 REG4Q9BYZ8 158 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 LINC00869P0C866 280 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 ARL14EPLP0DKL9 152 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 GRNP28799 593 aaKnown RBP13.3□□□□□ -0.28
SYNM-201ENST00000328642 SMIM8Q96KF7 97 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 GINS3Q9BRX5 216 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 FRYQ5TBA9 3013 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 TGIF2-C20orf24A0A0A6YYL0 155 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 A0A1W2PN81 502 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 CEACAM18A8MTB9 384 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 C9JQL5 133 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 DUTP33316 252 aaKnown RBP13.3□□□□□ -0.28
SYNM-201ENST00000328642 MLANAQ16655 118 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 GLRX5Q86SX6 157 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 FAM222BQ8WU58 562 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 CTDSP1Q9GZU7 261 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 J3KRW8 73 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 IGHV3-23P01764 117 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 IGFBP2P18065 325 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 CFPP27918 469 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 TIMP3P35625 211 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 KIR2DS2P43631 304 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 RPL27AP46776 148 aaKnown RBP13.3□□□□□ -0.28
SYNM-201ENST00000328642 SERF2P84101 59 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 NMSQ5H8A3 153 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 VSTM2AQ8TAG5 236 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 DKK4Q9UBT3 224 aa13.3□□□□□ -0.28
SYNM-201ENST00000328642 TRGC2P03986 189 aa13.29□□□□□ -0.28
SYNM-201ENST00000328642 BPIFB3P59826 476 aa13.29□□□□□ -0.28
SYNM-201ENST00000328642 RYDENQ9NUL5 291 aaKnown RBP13.29□□□□□ -0.28
SYNM-201ENST00000328642 COA4Q9NYJ1 87 aa13.29□□□□□ -0.28
SYNM-201ENST00000328642 FKBP11Q9NYL4 201 aa13.29□□□□□ -0.28
SYNM-201ENST00000328642 TANC2Q9HCD6 1990 aa13.29□□□□□ -0.28
SYNM-201ENST00000328642 TNRC6AQ8NDV7 1962 aaKnown RBP13.29□□□□□ -0.28
SYNM-201ENST00000328642 MRPL54Q6P161 138 aaKnown RBP13.29□□□□□ -0.28
SYNM-201ENST00000328642 IL22RA2Q969J5 263 aa13.29□□□□□ -0.28
SYNM-201ENST00000328642 HIF1ANQ9NWT6 349 aa13.29□□□□□ -0.28
SYNM-201ENST00000328642 GNG4P50150 75 aa13.29□□□□□ -0.28
SYNM-201ENST00000328642 OR1L4Q8NGR5 311 aa13.29□□□□□ -0.28
SYNM-201ENST00000328642 ZNF729A6NN14 1252 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms