RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CST9LP1Q5W188 147 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 LYPD2Q6UXB3 125 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 OR10A7Q8NGE5 316 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 H1FXQ92522 213 aaKnown RBP6.29□□□□□ -1.4
TRIM55-202ENST00000315962 DYNLRB1Q9NP97 96 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 SLC39A9Q9NUM3 307 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 HCFC1P51610 2035 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 MALRD1Q5VYJ5 2156 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 OOEPA6NGQ2 149 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 H7BYZ3 331 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 SIAH2O43255 324 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 NUPR1O60356 82 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 PAGE4O60829 102 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 PROP1O75360 226 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 HBE1P02100 147 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 OPN1MWP04001 364 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 OPN1MW2P0DN77 364 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 OPN1MW3P0DN78 364 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 CCL3L1P16619 93 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 BRWD1-AS2P59051 145 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 BATFQ16520 125 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 ASPHD1Q5U4P2 390 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 OR13D1Q8NGV5 346 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 OR1P1Q8NH06 330 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 PARLQ9H300 379 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 CISD1Q9NZ45 108 aaKnown RBP6.28□□□□□ -1.4
TRIM55-202ENST00000315962 RNF7Q9UBF6 113 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 WNK2Q9Y3S1 2297 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 A0A1B0GW64 132 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 CLEC18AA5D8T8 446 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 C17orf100A8MU93 164 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 S1PR2O95136 353 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 SCGB1D1O95968 90 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 IFNA10P01566 189 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 REG1BP48304 166 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 RPL23P62829 140 aaKnown RBP6.28□□□□□ -1.4
TRIM55-202ENST00000315962 SRPXP78539 464 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 BAXQ07812 192 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 SLC38A11Q08AI6 406 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 KLRB1Q12918 225 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 PRR31Q5SQ13 230 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 FAM78BQ5VT40 261 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 Q6ZS49 121 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 TMEM256Q8N2U0 113 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 CLEC18CQ8NCF0 446 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 IGFBPL1Q8WX77 278 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 VKORC1Q9BQB6 163 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 SIRT7Q9NRC8 400 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 ARHGAP32A7KAX9 2087 aa6.28□□□□□ -1.4
TRIM55-202ENST00000315962 CUBNO60494 3623 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 TRAV38-1A0A0B4J264 116 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 SHISA9B4DS77 424 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 PPP5D1E7EU14 171 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 H0Y980 276 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 SPINT2O43291 252 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 ZG16O60844 167 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 FCGR3BO75015 233 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 IRF2P14316 349 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 S100GP29377 79 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 BSXQ3C1V8 233 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 SLC35E4Q6ICL7 350 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 TEX38Q6PEX7 206 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 LURAP1Q96LR2 239 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 NCOR1P1Q9H4R4 102 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 TCAPO15273 167 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 SPINK4O60575 86 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 FCN3O75636 299 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 DFFBO76075 338 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 LHBP01229 141 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 THBS3P49746 956 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 ADORA2A-AS1P86434 159 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 MEF2BQ02080 365 aaPredicted RBP6.27□□□□□ -1.41
TRIM55-202ENST00000315962 PRAMEF5Q5TYX0 476 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 SP5Q6BEB4 398 aaPredicted RBP6.27□□□□□ -1.41
TRIM55-202ENST00000315962 TMEM183AQ8IXX5 376 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 FAM169BQ8N8A8 192 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 OR5D13Q8NGL4 314 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 IL22RA2Q969J5 263 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 IMMP2LQ96T52 175 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 AGMATQ9BSE5 352 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 ELOVL5Q9NYP7 299 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 IL19Q9UHD0 177 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 VAX2Q9UIW0 290 aa6.27□□□□□ -1.41
TRIM55-202ENST00000315962 ELOA3CA0A087WX78 387 aaPredicted RBP6.26□□□□□ -1.41
TRIM55-202ENST00000315962 TRBV6-6A0A0A6YYG2 114 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 A6NJY4 79 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 C15orf65H3BRN8 121 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 M0R1X1 148 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 FRMD6-AS1P0C7T7 363 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 TMEM11P17152 192 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 TNFSF4P23510 183 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 RPL29P47914 159 aaKnown RBP6.26□□□□□ -1.41
TRIM55-202ENST00000315962 ATP5G3P48201 142 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 TAS2R60P59551 318 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 TMEM241Q24JQ0 296 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 TDRG1Q3Y452 100 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 LYG1Q8N1E2 194 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 ZNF114Q8NC26 417 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 WDR61Q9GZS3 305 aaKnown RBP6.26□□□□□ -1.41
TRIM55-202ENST00000315962 JKAMPQ9P055 326 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms