RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 UBR3Q6ZT12 1888 aa13.72□□□□□ -0.21
SSRP1-202ENST00000293880 TBX6O95947 436 aaPredicted RBP13.72□□□□□ -0.21
SSRP1-202ENST00000293880 FAM214BQ7L5A3 538 aa13.72□□□□□ -0.21
SSRP1-202ENST00000293880 SMDT1Q9H4I9 107 aa13.72□□□□□ -0.21
SSRP1-202ENST00000293880 PROB1E7EW31 1015 aa13.72□□□□□ -0.21
SSRP1-202ENST00000293880 PAX2Q02962 417 aa13.72□□□□□ -0.21
SSRP1-202ENST00000293880 ZNRF1Q8ND25 227 aa13.72□□□□□ -0.21
SSRP1-202ENST00000293880 MRAPQ8TCY5 172 aa13.72□□□□□ -0.21
SSRP1-202ENST00000293880 PRELID3AQ96N28 172 aa13.72□□□□□ -0.21
SSRP1-202ENST00000293880 TRAV24A0A0B4J272 114 aa13.72□□□□□ -0.21
SSRP1-202ENST00000293880 A0A1W2PRX2 142 aa13.72□□□□□ -0.21
SSRP1-202ENST00000293880 TMPRSS3P57727 454 aa13.72□□□□□ -0.21
SSRP1-202ENST00000293880 CYP2G1PQ6ZSU1 146 aa13.72□□□□□ -0.21
SSRP1-202ENST00000293880 MARS2Q96GW9 593 aaKnown RBP13.72□□□□□ -0.21
SSRP1-202ENST00000293880 MC5RP33032 325 aa13.71□□□□□ -0.21
SSRP1-202ENST00000293880 GNG5P63218 68 aa13.71□□□□□ -0.21
SSRP1-202ENST00000293880 EFNB1P98172 346 aa13.71□□□□□ -0.21
SSRP1-202ENST00000293880 CD69Q07108 199 aa13.71□□□□□ -0.21
SSRP1-202ENST00000293880 OR51G1Q8NGK1 321 aa13.71□□□□□ -0.21
SSRP1-202ENST00000293880 PIMREGQ9BSJ6 248 aa13.71□□□□□ -0.21
SSRP1-202ENST00000293880 Q96M66 194 aa13.71□□□□□ -0.21
SSRP1-202ENST00000293880 NPCDR1Q9BY65 106 aa13.71□□□□□ -0.21
SSRP1-202ENST00000293880 FOXA2Q9Y261 457 aaPredicted RBP13.71□□□□□ -0.21
SSRP1-202ENST00000293880 GATA2P23769 480 aaPredicted RBP13.71□□□□□ -0.21
SSRP1-202ENST00000293880 RPS20P60866 119 aaKnown RBP13.71□□□□□ -0.21
SSRP1-202ENST00000293880 GLMPQ8WWB7 406 aa13.71□□□□□ -0.21
SSRP1-202ENST00000293880 LSM4Q9Y4Z0 139 aaKnown RBP13.71□□□□□ -0.21
SSRP1-202ENST00000293880 SFTPCP11686 197 aa13.71□□□□□ -0.22
SSRP1-202ENST00000293880 TCF19Q9Y242 345 aa13.71□□□□□ -0.22
SSRP1-202ENST00000293880 RAMP1O60894 148 aa13.71□□□□□ -0.22
SSRP1-202ENST00000293880 TFF1P04155 84 aa13.71□□□□□ -0.22
SSRP1-202ENST00000293880 HSPE1P61604 102 aaKnown RBP13.71□□□□□ -0.22
SSRP1-202ENST00000293880 ZNF658BQ4V348 819 aaPredicted RBP13.71□□□□□ -0.22
SSRP1-202ENST00000293880 FAM159AQ6UWV7 190 aa13.71□□□□□ -0.22
SSRP1-202ENST00000293880 TCF24Q7RTU0 167 aa13.71□□□□□ -0.22
SSRP1-202ENST00000293880 C5orf67F2Z3F1 127 aa13.7□□□□□ -0.22
SSRP1-202ENST00000293880 GPR183P32249 361 aa13.7□□□□□ -0.22
SSRP1-202ENST00000293880 LOC105371242A0A075B767 164 aa13.7□□□□□ -0.22
SSRP1-202ENST00000293880 CD1AP06126 327 aa13.7□□□□□ -0.22
SSRP1-202ENST00000293880 EEF1AKMT3Q96AZ1 226 aa13.7□□□□□ -0.22
SSRP1-202ENST00000293880 MSGN1A6NI15 193 aa13.7□□□□□ -0.22
SSRP1-202ENST00000293880 WISP3O95389 354 aaPredicted RBP13.7□□□□□ -0.22
SSRP1-202ENST00000293880 COX6B1P14854 86 aa13.7□□□□□ -0.22
SSRP1-202ENST00000293880 C1QL2Q7Z5L3 287 aa13.7□□□□□ -0.22
SSRP1-202ENST00000293880 KIR2DL4Q99706 377 aa13.7□□□□□ -0.22
SSRP1-202ENST00000293880 MCM3APO60318 1980 aa13.7□□□□□ -0.22
SSRP1-202ENST00000293880 ZNF708P17019 499 aa13.7□□□□□ -0.22
SSRP1-202ENST00000293880 WFDC12Q8WWY7 111 aa13.7□□□□□ -0.22
SSRP1-202ENST00000293880 CCL19Q99731 98 aa13.7□□□□□ -0.22
SSRP1-202ENST00000293880 ZNF638Q14966 1978 aaKnown RBP13.7□□□□□ -0.22
SSRP1-202ENST00000293880 PEX7O00628 323 aa13.69□□□□□ -0.22
SSRP1-202ENST00000293880 ADMP35318 185 aa13.69□□□□□ -0.22
SSRP1-202ENST00000293880 NPC2P61916 151 aa13.69□□□□□ -0.22
SSRP1-202ENST00000293880 SCGB3A1Q96QR1 104 aa13.69□□□□□ -0.22
SSRP1-202ENST00000293880 FGF5P12034 268 aa13.69□□□□□ -0.22
SSRP1-202ENST00000293880 LINC01560Q8TB33 94 aa13.69□□□□□ -0.22
SSRP1-202ENST00000293880 AICDAQ9GZX7 198 aa13.69□□□□□ -0.22
SSRP1-202ENST00000293880 C10orf128Q5T292 105 aa13.69□□□□□ -0.22
SSRP1-202ENST00000293880 CENPVQ7Z7K6 275 aaPredicted RBP13.69□□□□□ -0.22
SSRP1-202ENST00000293880 SMIM8Q96KF7 97 aa13.69□□□□□ -0.22
SSRP1-202ENST00000293880 IGKV1D-42A0A075B6H8 117 aa13.69□□□□□ -0.22
SSRP1-202ENST00000293880 ZNF729A6NN14 1252 aaPredicted RBP13.69□□□□□ -0.22
SSRP1-202ENST00000293880 LEPP41159 167 aa13.69□□□□□ -0.22
SSRP1-202ENST00000293880 LAMB2P55268 1798 aa13.69□□□□□ -0.22
SSRP1-202ENST00000293880 ZNF146Q15072 292 aa13.69□□□□□ -0.22
SSRP1-202ENST00000293880 OCIAD2Q56VL3 154 aa13.69□□□□□ -0.22
SSRP1-202ENST00000293880 ITLN2Q8WWU7 325 aaPredicted RBP13.69□□□□□ -0.22
SSRP1-202ENST00000293880 RGPD4Q7Z3J3 1758 aa13.69□□□□□ -0.22
SSRP1-202ENST00000293880 PGPEP1LA6NFU8 196 aa13.68□□□□□ -0.22
SSRP1-202ENST00000293880 CEACAM4O75871 244 aa13.68□□□□□ -0.22
SSRP1-202ENST00000293880 LIPFP07098 398 aa13.68□□□□□ -0.22
SSRP1-202ENST00000293880 MIR17HGQ75NE6 70 aa13.68□□□□□ -0.22
SSRP1-202ENST00000293880 DUSP15Q9H1R2 295 aaPredicted RBP13.68□□□□□ -0.22
SSRP1-202ENST00000293880 PILRAQ9UKJ1 303 aa13.68□□□□□ -0.22
SSRP1-202ENST00000293880 FAM106AQ4KMX7 169 aa13.68□□□□□ -0.22
SSRP1-202ENST00000293880 TPTE2P1Q5T6R2 138 aa13.68□□□□□ -0.22
SSRP1-202ENST00000293880 TEX45Q8NA69 505 aa13.68□□□□□ -0.22
SSRP1-202ENST00000293880 WDYHV1Q96HA8 205 aa13.68□□□□□ -0.22
SSRP1-202ENST00000293880 SYNGR3O43761 229 aa13.68□□□□□ -0.22
SSRP1-202ENST00000293880 NPPCP23582 126 aa13.68□□□□□ -0.22
SSRP1-202ENST00000293880 ZFAND6Q6FIF0 208 aa13.68□□□□□ -0.22
SSRP1-202ENST00000293880 FAM71F2Q6NXP2 309 aa13.68□□□□□ -0.22
SSRP1-202ENST00000293880 KIAA1217Q5T5P2 1943 aa13.68□□□□□ -0.22
SSRP1-202ENST00000293880 IL36BQ9NZH7 164 aa13.68□□□□□ -0.22
SSRP1-202ENST00000293880 DICER1Q9UPY3 1922 aaKnown RBP13.68□□□□□ -0.22
SSRP1-202ENST00000293880 ARFGEF1Q9Y6D6 1849 aa13.68□□□□□ -0.22
SSRP1-202ENST00000293880 IGHV3-64A0A075B6Q5 118 aa13.67□□□□□ -0.22
SSRP1-202ENST00000293880 A0A0U1RRA0 63 aa13.67□□□□□ -0.22
SSRP1-202ENST00000293880 SELENOTP62341 195 aa13.67□□□□□ -0.22
SSRP1-202ENST00000293880 SCARF2Q96GP6 870 aaPredicted RBP13.67□□□□□ -0.22
SSRP1-202ENST00000293880 CFHR5Q9BXR6 569 aa13.67□□□□□ -0.22
SSRP1-202ENST00000293880 USP54Q70EL1 1684 aa13.67□□□□□ -0.22
SSRP1-202ENST00000293880 TRBV9A0A0B4J1U6 114 aa13.67□□□□□ -0.22
SSRP1-202ENST00000293880 C19orf48Q6RUI8 117 aa13.67□□□□□ -0.22
SSRP1-202ENST00000293880 C5orf30Q96GV9 206 aa13.67□□□□□ -0.22
SSRP1-202ENST00000293880 COPS9Q8WXC6 57 aa13.67□□□□□ -0.22
SSRP1-202ENST00000293880 DUX3Q96PT4 197 aa13.67□□□□□ -0.22
SSRP1-202ENST00000293880 RNASE7Q9H1E1 156 aaKnown RBP13.67□□□□□ -0.22
SSRP1-202ENST00000293880 NPIPB11E5RHQ5 1161 aa13.67□□□□□ -0.22
SSRP1-202ENST00000293880 HTN3P15516 51 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms