RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 DPPA5A6NC42 116 aa18.83■□□□□ 0.6
SDF2L1-201ENST00000248958 IGHV3-11P01762 117 aa18.83■□□□□ 0.6
SDF2L1-201ENST00000248958 AKAIN1P0CW23 69 aa18.83■□□□□ 0.6
SDF2L1-201ENST00000248958 ZNF585BQ52M93 769 aa18.83■□□□□ 0.6
SDF2L1-201ENST00000248958 C9orf66Q5T8R8 295 aa18.83■□□□□ 0.6
SDF2L1-201ENST00000248958 OR4D10Q8NGI6 311 aa18.83■□□□□ 0.6
SDF2L1-201ENST00000248958 FYTTD1Q96QD9 318 aaKnown RBP18.83■□□□□ 0.6
SDF2L1-201ENST00000248958 COMMD5Q9GZQ3 224 aa18.83■□□□□ 0.6
SDF2L1-201ENST00000248958 NOTCH3Q9UM47 2321 aa18.82■□□□□ 0.6
SDF2L1-201ENST00000248958 NPIPB5A8MRT5 1133 aa18.82■□□□□ 0.6
SDF2L1-201ENST00000248958 TEX22C9J3V5 150 aa18.82■□□□□ 0.6
SDF2L1-201ENST00000248958 SCGB2B2Q4G0G5 96 aa18.82■□□□□ 0.6
SDF2L1-201ENST00000248958 THOC7Q6I9Y2 204 aaKnown RBP18.82■□□□□ 0.6
SDF2L1-201ENST00000248958 SRSF8Q9BRL6 282 aaKnown RBP18.82■□□□□ 0.6
SDF2L1-201ENST00000248958 ALX4Q9H161 411 aaPredicted RBP18.82■□□□□ 0.6
SDF2L1-201ENST00000248958 RANGRFQ9HD47 186 aaPredicted RBP18.82■□□□□ 0.6
SDF2L1-201ENST00000248958 NDUFA13Q9P0J0 144 aa18.82■□□□□ 0.6
SDF2L1-201ENST00000248958 FAM223BA6NKX1 122 aa18.81■□□□□ 0.6
SDF2L1-201ENST00000248958 DHFRP00374 187 aa18.81■□□□□ 0.6
SDF2L1-201ENST00000248958 FAM223AQ8IWN6 122 aa18.81■□□□□ 0.6
SDF2L1-201ENST00000248958 CCDC71LQ8N9Z2 235 aa18.81■□□□□ 0.6
SDF2L1-201ENST00000248958 NOTCH1P46531 2555 aa18.81■□□□□ 0.6
SDF2L1-201ENST00000248958 IGHV4OR15-8A0A075B7B6 117 aa18.8■□□□□ 0.6
SDF2L1-201ENST00000248958 A0A087WW49 117 aa18.8■□□□□ 0.6
SDF2L1-201ENST00000248958 TRBV9A0A0B4J1U6 114 aa18.8■□□□□ 0.6
SDF2L1-201ENST00000248958 ANKRD20A5PA0PJZ0 165 aa18.8■□□□□ 0.6
SDF2L1-201ENST00000248958 HMX3A6NHT5 357 aa18.8■□□□□ 0.6
SDF2L1-201ENST00000248958 E7EUB6 86 aa18.8■□□□□ 0.6
SDF2L1-201ENST00000248958 KRASP01116 189 aa18.8■□□□□ 0.6
SDF2L1-201ENST00000248958 RPA2P15927 270 aa18.8■□□□□ 0.6
SDF2L1-201ENST00000248958 PPP5CP53041 499 aa18.8■□□□□ 0.6
SDF2L1-201ENST00000248958 PIGPP57054 158 aa18.8■□□□□ 0.6
SDF2L1-201ENST00000248958 EGFEM1PQ0D2K5 195 aa18.8■□□□□ 0.6
SDF2L1-201ENST00000248958 TSC22D3Q99576 134 aa18.8■□□□□ 0.6
SDF2L1-201ENST00000248958 OVOL1O14753 267 aa18.79■□□□□ 0.6
SDF2L1-201ENST00000248958 SNAPC5O75971 98 aa18.79■□□□□ 0.6
SDF2L1-201ENST00000248958 CRYGCP07315 174 aa18.79■□□□□ 0.6
SDF2L1-201ENST00000248958 G6PCP35575 357 aa18.79■□□□□ 0.6
SDF2L1-201ENST00000248958 OR2B8PP59922 312 aa18.79■□□□□ 0.6
SDF2L1-201ENST00000248958 SURF2Q15527 256 aaPredicted RBP18.79■□□□□ 0.6
SDF2L1-201ENST00000248958 FAM209BQ5JX69 171 aa18.79■□□□□ 0.6
SDF2L1-201ENST00000248958 ZNF343Q6P1L6 599 aa18.79■□□□□ 0.6
SDF2L1-201ENST00000248958 HSD17B13Q7Z5P4 300 aaPredicted RBP18.79■□□□□ 0.6
SDF2L1-201ENST00000248958 PRRT1Q99946 306 aa18.79■□□□□ 0.6
SDF2L1-201ENST00000248958 COPZ2Q9P299 210 aa18.79■□□□□ 0.6
SDF2L1-201ENST00000248958 TRAV3A0A0B4J244 114 aa18.78■□□□□ 0.6
SDF2L1-201ENST00000248958 SEC14L6B5MCN3 397 aa18.78■□□□□ 0.6
SDF2L1-201ENST00000248958 B3GALNT1O75752 331 aa18.78■□□□□ 0.6
SDF2L1-201ENST00000248958 CTSDP07339 412 aaPredicted RBP18.78■□□□□ 0.6
SDF2L1-201ENST00000248958 HIST1H1BP16401 226 aaKnown RBP18.78■□□□□ 0.6
SDF2L1-201ENST00000248958 ZP3P21754 424 aa18.78■□□□□ 0.6
SDF2L1-201ENST00000248958 PSMB6P28072 239 aa18.78■□□□□ 0.6
SDF2L1-201ENST00000248958 INSL3P51460 131 aa18.78■□□□□ 0.6
SDF2L1-201ENST00000248958 RHOGP84095 191 aa18.78■□□□□ 0.6
SDF2L1-201ENST00000248958 NECAP1Q8NC96 275 aa18.78■□□□□ 0.6
SDF2L1-201ENST00000248958 OR4C16Q8NGL9 310 aa18.78■□□□□ 0.6
SDF2L1-201ENST00000248958 DCUN1D4Q92564 292 aa18.78■□□□□ 0.6
SDF2L1-201ENST00000248958 THAP7Q9BT49 309 aaPredicted RBP18.78■□□□□ 0.6
SDF2L1-201ENST00000248958 AURKAIP1Q9NWT8 199 aaPredicted RBP18.78■□□□□ 0.6
SDF2L1-201ENST00000248958 FKBP11Q9NYL4 201 aa18.78■□□□□ 0.6
SDF2L1-201ENST00000248958 A0A1B0GW64 132 aa18.77■□□□□ 0.6
SDF2L1-201ENST00000248958 H0Y980 276 aa18.77■□□□□ 0.6
SDF2L1-201ENST00000248958 SERPINE2P07093 398 aa18.77■□□□□ 0.6
SDF2L1-201ENST00000248958 CTRB1P17538 263 aa18.77■□□□□ 0.6
SDF2L1-201ENST00000248958 SLURP1P55000 103 aa18.77■□□□□ 0.6
SDF2L1-201ENST00000248958 ZNF45Q02386 682 aa18.77■□□□□ 0.6
SDF2L1-201ENST00000248958 ATP5G2Q06055 141 aa18.77■□□□□ 0.6
SDF2L1-201ENST00000248958 CTRB2Q6GPI1 263 aa18.77■□□□□ 0.6
SDF2L1-201ENST00000248958 OR13C8Q8NGS7 320 aa18.77■□□□□ 0.6
SDF2L1-201ENST00000248958 MARCH1Q8TCQ1 289 aa18.77■□□□□ 0.6
SDF2L1-201ENST00000248958 DLX4Q92988 240 aaPredicted RBP18.77■□□□□ 0.6
SDF2L1-201ENST00000248958 AKIP1Q9NQ31 210 aa18.77■□□□□ 0.6
SDF2L1-201ENST00000248958 PEF1Q9UBV8 284 aaKnown RBP18.77■□□□□ 0.6
SDF2L1-201ENST00000248958 SCP2D1Q9UJQ7 156 aa18.77■□□□□ 0.6
SDF2L1-201ENST00000248958 PRNDQ9UKY0 176 aa18.77■□□□□ 0.6
SDF2L1-201ENST00000248958 C14orf166Q9Y224 244 aaKnown RBP18.77■□□□□ 0.6
SDF2L1-201ENST00000248958 CGB1A6NKQ9 187 aa18.76■□□□□ 0.59
SDF2L1-201ENST00000248958 ATG12O94817 140 aa18.76■□□□□ 0.59
SDF2L1-201ENST00000248958 MYOD1P15172 320 aa18.76■□□□□ 0.59
SDF2L1-201ENST00000248958 PI3P19957 117 aa18.76■□□□□ 0.59
SDF2L1-201ENST00000248958 KLK9Q2XQG4 91 aa18.76■□□□□ 0.59
SDF2L1-201ENST00000248958 FAAP20Q6NZ36 180 aa18.76■□□□□ 0.59
SDF2L1-201ENST00000248958 OR1L8Q8NGR8 309 aa18.76■□□□□ 0.59
SDF2L1-201ENST00000248958 SEC22AQ96IW7 307 aa18.76■□□□□ 0.59
SDF2L1-201ENST00000248958 QTRT1Q9BXR0 403 aaKnown RBP18.76■□□□□ 0.59
SDF2L1-201ENST00000248958 SLC2A8Q9NY64 477 aa18.76■□□□□ 0.59
SDF2L1-201ENST00000248958 KLK9Q9UKQ9 250 aa18.76■□□□□ 0.59
SDF2L1-201ENST00000248958 V9GYH0 126 aa18.76■□□□□ 0.59
SDF2L1-201ENST00000248958 C3orf85A0A1B0GTC6 90 aa18.75■□□□□ 0.59
SDF2L1-201ENST00000248958 PRH1P02810 166 aa18.75■□□□□ 0.59
SDF2L1-201ENST00000248958 TRAPPC2P0DI81 140 aa18.75■□□□□ 0.59
SDF2L1-201ENST00000248958 TRAPPC2BP0DI82 140 aa18.75■□□□□ 0.59
SDF2L1-201ENST00000248958 AREGP15514 252 aa18.75■□□□□ 0.59
SDF2L1-201ENST00000248958 HOXD3P31249 432 aaPredicted RBP18.75■□□□□ 0.59
SDF2L1-201ENST00000248958 PYDC2Q56P42 97 aa18.75■□□□□ 0.59
SDF2L1-201ENST00000248958 H2BFWTQ7Z2G1 175 aa18.75■□□□□ 0.59
SDF2L1-201ENST00000248958 CCDC190Q86UF4 302 aa18.75■□□□□ 0.59
SDF2L1-201ENST00000248958 SCGB3A2Q96PL1 93 aa18.75■□□□□ 0.59
SDF2L1-201ENST00000248958 TEX50A0A1B0GTY4 177 aa18.74■□□□□ 0.59
SDF2L1-201ENST00000248958 PRB2P02812 416 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms