RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PIGPP57054 158 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 ERVK-16P61578 105 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 RUNX1Q01196 453 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 MEF2DQ14814 521 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 ZNF79Q15937 498 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 POU2AF1Q16633 256 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 BEAN1Q3B7T3 259 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 C19orf35Q6ZS72 473 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 CCDC190Q86UF4 302 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 OR1N2Q8NGR9 330 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 OR13C8Q8NGS7 320 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 SPIN2AQ99865 258 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 SPIN2BQ9BPZ2 258 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 AIFM2Q9BRQ8 373 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 THAP7Q9BT49 309 aaPredicted RBP9.82□□□□□ -0.84
LSM5-201ENST00000223084 SLA2Q9H6Q3 261 aa9.82□□□□□ -0.84
LSM5-201ENST00000223084 CGB1A6NKQ9 187 aa9.81□□□□□ -0.84
LSM5-201ENST00000223084 MARCH11A6NNE9 402 aa9.81□□□□□ -0.84
LSM5-201ENST00000223084 H3BUA1 57 aa9.81□□□□□ -0.84
LSM5-201ENST00000223084 IGKV1-39P01597 117 aa9.81□□□□□ -0.84
LSM5-201ENST00000223084 IGKV1D-39P04432 117 aa9.81□□□□□ -0.84
LSM5-201ENST00000223084 LGALS1P09382 135 aaKnown RBP9.81□□□□□ -0.84
LSM5-201ENST00000223084 AREGP15514 252 aa9.81□□□□□ -0.84
LSM5-201ENST00000223084 RND3P61587 244 aa9.81□□□□□ -0.84
LSM5-201ENST00000223084 FHL3Q13643 280 aa9.81□□□□□ -0.84
LSM5-201ENST00000223084 OR51S1Q8NGJ8 323 aa9.81□□□□□ -0.84
LSM5-201ENST00000223084 OR6Q1Q8NGQ2 317 aa9.81□□□□□ -0.84
LSM5-201ENST00000223084 ZNF486Q96H40 463 aaPredicted RBP9.81□□□□□ -0.84
LSM5-201ENST00000223084 NSG2Q9Y328 171 aa9.81□□□□□ -0.84
LSM5-201ENST00000223084 IGHV4OR15-8A0A075B7B6 117 aa9.8□□□□□ -0.84
LSM5-201ENST00000223084 A0A087WW49 117 aa9.8□□□□□ -0.84
LSM5-201ENST00000223084 C13orf42A0A1B0GVH6 325 aa9.8□□□□□ -0.84
LSM5-201ENST00000223084 REG1AP05451 166 aa9.8□□□□□ -0.84
LSM5-201ENST00000223084 OR2B8PP59922 312 aa9.8□□□□□ -0.84
LSM5-201ENST00000223084 ZNF45Q02386 682 aa9.8□□□□□ -0.84
LSM5-201ENST00000223084 ZNF616Q08AN1 781 aa9.8□□□□□ -0.84
LSM5-201ENST00000223084 Q8N402 240 aa9.8□□□□□ -0.84
LSM5-201ENST00000223084 TTC9CQ8N5M4 171 aa9.8□□□□□ -0.84
LSM5-201ENST00000223084 ZFAND1Q8TCF1 268 aa9.8□□□□□ -0.84
LSM5-201ENST00000223084 TRIM63Q969Q1 353 aa9.8□□□□□ -0.84
LSM5-201ENST00000223084 RCC1LQ96I51 464 aaKnown RBP9.8□□□□□ -0.84
LSM5-201ENST00000223084 TP53RKQ96S44 253 aa9.8□□□□□ -0.84
LSM5-201ENST00000223084 RTBDNQ9BSG5 229 aaPredicted RBP9.8□□□□□ -0.84
LSM5-201ENST00000223084 COPZ2Q9P299 210 aa9.8□□□□□ -0.84
LSM5-201ENST00000223084 ANKRD34BA5PLL1 514 aa9.79□□□□□ -0.84
LSM5-201ENST00000223084 CTSDP07339 412 aaPredicted RBP9.79□□□□□ -0.84
LSM5-201ENST00000223084 HOXD3P31249 432 aaPredicted RBP9.79□□□□□ -0.84
LSM5-201ENST00000223084 SLURP1P55000 103 aa9.79□□□□□ -0.84
LSM5-201ENST00000223084 KLF9Q13886 244 aaPredicted RBP9.79□□□□□ -0.84
LSM5-201ENST00000223084 SP6Q3SY56 376 aa9.79□□□□□ -0.84
LSM5-201ENST00000223084 KPRPQ5T749 579 aaPredicted RBP9.79□□□□□ -0.84
LSM5-201ENST00000223084 DPF1Q92782 380 aa9.79□□□□□ -0.84
LSM5-201ENST00000223084 SEC22AQ96IW7 307 aa9.79□□□□□ -0.84
LSM5-201ENST00000223084 FAM212BQ9NTI7 297 aaPredicted RBP9.79□□□□□ -0.84
LSM5-201ENST00000223084 MCUBQ9NWR8 336 aa9.79□□□□□ -0.84
LSM5-201ENST00000223084 A0A0G2JLM5 398 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 C3orf85A0A1B0GTC6 90 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 TEX50A0A1B0GTY4 177 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 DBX1A6NMT0 343 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 LINC01619G3V211 115 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 H0Y980 276 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 OR2J3O76001 311 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 BRI3O95415 125 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 HSPB1P04792 205 aaKnown RBP9.78□□□□□ -0.84
LSM5-201ENST00000223084 SERPINE2P07093 398 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 OR8U8P0C7N1 319 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 PTBP1P26599 531 aaKnown RBP eCLIP9.78□□□□□ -0.84
LSM5-201ENST00000223084 RHOGP84095 191 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 IZUMO4Q1ZYL8 232 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 SPANXN2Q5MJ10 180 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 SLC25A42Q86VD7 318 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 TOMM5Q8N4H5 51 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 CCDC71LQ8N9Z2 235 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 OR10W1Q8NGF6 305 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 DCUN1D4Q92564 292 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 DLX4Q92988 240 aaPredicted RBP9.78□□□□□ -0.84
LSM5-201ENST00000223084 PRRT1Q99946 306 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 COMMD5Q9GZQ3 224 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 SRRQ9GZT4 340 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 C5orf66Q9H5L9 145 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 AKIP1Q9NQ31 210 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 GPR132Q9UNW8 380 aa9.78□□□□□ -0.84
LSM5-201ENST00000223084 C14orf166Q9Y224 244 aaKnown RBP9.78□□□□□ -0.84
LSM5-201ENST00000223084 TRBV9A0A0B4J1U6 114 aa9.77□□□□□ -0.85
LSM5-201ENST00000223084 IGLC7A0M8Q6 106 aa9.77□□□□□ -0.85
LSM5-201ENST00000223084 NPIPB5A8MRT5 1133 aa9.77□□□□□ -0.85
LSM5-201ENST00000223084 SNAPC5O75971 98 aa9.77□□□□□ -0.85
LSM5-201ENST00000223084 DUS4LO95620 317 aaKnown RBP9.77□□□□□ -0.85
LSM5-201ENST00000223084 TRBV12-3P01733 135 aa9.77□□□□□ -0.85
LSM5-201ENST00000223084 PSMB6P28072 239 aa9.77□□□□□ -0.85
LSM5-201ENST00000223084 ETV6P41212 452 aa9.77□□□□□ -0.85
LSM5-201ENST00000223084 H2BFWTQ7Z2G1 175 aa9.77□□□□□ -0.85
LSM5-201ENST00000223084 OR1L8Q8NGR8 309 aa9.77□□□□□ -0.85
LSM5-201ENST00000223084 USMG5Q96IX5 58 aa9.77□□□□□ -0.85
LSM5-201ENST00000223084 FANCD2OSQ96PS1 177 aa9.77□□□□□ -0.85
LSM5-201ENST00000223084 MCRIP2Q9BUT9 160 aaKnown RBP9.77□□□□□ -0.85
LSM5-201ENST00000223084 HINT2Q9BX68 163 aa9.77□□□□□ -0.85
LSM5-201ENST00000223084 QTRT1Q9BXR0 403 aaKnown RBP9.77□□□□□ -0.85
LSM5-201ENST00000223084 SLC2A8Q9NY64 477 aa9.77□□□□□ -0.85
LSM5-201ENST00000223084 SCP2D1Q9UJQ7 156 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms