RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 SLC24A4Q8NFF2 622 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 OR10G8Q8NGN5 311 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 STARD4Q96DR4 205 aa10.97□□□□□ -0.65
SRP54-201ENST00000216774 YTHDF2Q9Y5A9 579 aaKnown RBP10.97□□□□□ -0.65
SRP54-201ENST00000216774 NKX2-8O15522 239 aa10.96□□□□□ -0.65
SRP54-201ENST00000216774 LHBP01229 141 aa10.96□□□□□ -0.65
SRP54-201ENST00000216774 IGHV3-13P01766 116 aa10.96□□□□□ -0.65
SRP54-201ENST00000216774 THBS3P49746 956 aa10.96□□□□□ -0.65
SRP54-201ENST00000216774 STPG3Q8N7X2 389 aa10.96□□□□□ -0.65
SRP54-201ENST00000216774 ZNRF1Q8ND25 227 aa10.96□□□□□ -0.65
SRP54-201ENST00000216774 OCC1Q8TAD7 63 aa10.96□□□□□ -0.65
SRP54-201ENST00000216774 SSMEM1Q8WWF3 244 aa10.96□□□□□ -0.65
SRP54-201ENST00000216774 CORO2AQ92828 525 aa10.96□□□□□ -0.65
SRP54-201ENST00000216774 ADTRPQ96IZ2 230 aa10.96□□□□□ -0.65
SRP54-201ENST00000216774 OR2V2Q96R30 315 aa10.96□□□□□ -0.65
SRP54-201ENST00000216774 ARL2-SNX15V9GYD0 113 aa10.96□□□□□ -0.65
SRP54-201ENST00000216774 IGHV3OR15-7A0A075B7D8 119 aa10.96□□□□□ -0.66
SRP54-201ENST00000216774 A0A1B0GV90 55 aa10.96□□□□□ -0.66
SRP54-201ENST00000216774 C9JCJ5 164 aa10.96□□□□□ -0.66
SRP54-201ENST00000216774 TAS2R60P59551 318 aa10.96□□□□□ -0.66
SRP54-201ENST00000216774 OR4A47Q6IF82 309 aa10.96□□□□□ -0.66
SRP54-201ENST00000216774 SFXN3Q9BWM7 321 aa10.96□□□□□ -0.66
SRP54-201ENST00000216774 ENY2Q9NPA8 101 aa10.96□□□□□ -0.66
SRP54-201ENST00000216774 HCFC1P51610 2035 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 IGHV3-7P01780 117 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 AREGP15514 252 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 RPL31P62899 125 aaKnown RBP10.95□□□□□ -0.66
SRP54-201ENST00000216774 POU2AF1Q16633 256 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 MSMPQ1L6U9 139 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 C17orf58Q2M2W7 97 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 CT45A1Q5HYN5 189 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 C1orf229Q6ZS94 237 aaPredicted RBP10.95□□□□□ -0.66
SRP54-201ENST00000216774 LRP11Q86VZ4 500 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 CT45A3Q8NHU0 189 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 UHRF2Q96PU4 802 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 SEPSECSQ9HD40 501 aaKnown RBP10.95□□□□□ -0.66
SRP54-201ENST00000216774 DKK4Q9UBT3 224 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 SAA2-SAA4A0A096LPE2 208 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 TRGV10A0A0A0MS01 117 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 KBTBD11-OT1A0A1B0GTJ5 212 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 SAA2P0DJI9 122 aaPredicted RBP10.95□□□□□ -0.66
SRP54-201ENST00000216774 KLF3P57682 345 aaPredicted RBP10.95□□□□□ -0.66
SRP54-201ENST00000216774 SELENOTP62341 195 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 PRR20EP86478 221 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 PRR20CP86479 221 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 PRR20DP86480 221 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 PRR20BP86481 221 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 PRR20AP86496 221 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 MOGAT3Q86VF5 341 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 FKBP11Q9NYL4 201 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 IL36BQ9NZH7 164 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 TP53TG5Q9Y2B4 290 aa10.95□□□□□ -0.66
SRP54-201ENST00000216774 CA2P00918 260 aa10.94□□□□□ -0.66
SRP54-201ENST00000216774 RAB4BP61018 213 aa10.94□□□□□ -0.66
SRP54-201ENST00000216774 SSX2Q16385 188 aa10.94□□□□□ -0.66
SRP54-201ENST00000216774 FAM222BQ8WU58 562 aa10.94□□□□□ -0.66
SRP54-201ENST00000216774 NEUROG1Q92886 237 aa10.94□□□□□ -0.66
SRP54-201ENST00000216774 IDI2-AS1Q9NZ38 188 aa10.94□□□□□ -0.66
SRP54-201ENST00000216774 SLC25A10Q9UBX3 287 aaPredicted RBP10.94□□□□□ -0.66
SRP54-201ENST00000216774 A8MXE2 369 aa10.93□□□□□ -0.66
SRP54-201ENST00000216774 ADMP35318 185 aa10.93□□□□□ -0.66
SRP54-201ENST00000216774 GATA4P43694 442 aa10.93□□□□□ -0.66
SRP54-201ENST00000216774 C3orf36Q3SXR2 165 aa10.93□□□□□ -0.66
SRP54-201ENST00000216774 TMEM256Q8N2U0 113 aa10.93□□□□□ -0.66
SRP54-201ENST00000216774 PRNDQ9UKY0 176 aa10.93□□□□□ -0.66
SRP54-201ENST00000216774 ZNF257Q9Y2Q1 563 aa10.93□□□□□ -0.66
SRP54-201ENST00000216774 PRRC2CQ9Y520 2896 aaKnown RBP10.93□□□□□ -0.66
SRP54-201ENST00000216774 MBD3L4A6NDZ8 208 aaPredicted RBP10.93□□□□□ -0.66
SRP54-201ENST00000216774 MBD3L3A6NE82 208 aaPredicted RBP10.93□□□□□ -0.66
SRP54-201ENST00000216774 MBD3L5A6NJ08 208 aaPredicted RBP10.93□□□□□ -0.66
SRP54-201ENST00000216774 K7EN84 100 aa10.93□□□□□ -0.66
SRP54-201ENST00000216774 OR4A8P0C604 315 aa10.93□□□□□ -0.66
SRP54-201ENST00000216774 GLRXP35754 106 aa10.93□□□□□ -0.66
SRP54-201ENST00000216774 ATP5IP56385 69 aaPredicted RBP10.93□□□□□ -0.66
SRP54-201ENST00000216774 MRPS11P82912 194 aaKnown RBP10.93□□□□□ -0.66
SRP54-201ENST00000216774 ZNF90Q03938 601 aa10.93□□□□□ -0.66
SRP54-201ENST00000216774 SPATA31B1PQ5VZV4 182 aa10.93□□□□□ -0.66
SRP54-201ENST00000216774 MBD3L2Q8NHZ7 208 aaPredicted RBP10.93□□□□□ -0.66
SRP54-201ENST00000216774 MISP3Q96FF7 219 aa10.93□□□□□ -0.66
SRP54-201ENST00000216774 ZNF83P51522 516 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 TMEM30BQ3MIR4 351 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 SPRNQ5BIV9 151 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 TIMM23BQ5SRD1 257 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 TCF23Q7RTU1 214 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 ZNF439Q8NDP4 499 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 OR4P4Q8NGL7 312 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 LEAP2Q969E1 77 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 MS4A10Q96PG2 267 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 OR51B2Q9Y5P1 312 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 TET2Q6N021 2002 aaPredicted RBP10.92□□□□□ -0.66
SRP54-201ENST00000216774 NCOR1O75376 2440 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 SCGB1D1O95968 90 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 LINC00869P0C866 280 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 ESDP10768 282 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 UTF1Q5T230 341 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 CMTM2Q8TAZ6 248 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 ITLN1Q8WWA0 313 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 EAF1Q96JC9 268 aaPredicted RBP10.92□□□□□ -0.66
SRP54-201ENST00000216774 LINC00574Q9H8X3 128 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 TMEM167BQ9NRX6 74 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms