RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 FAM27E3Q08E93 113 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 HNF4GQ14541 408 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 HIST2H2BEQ16778 126 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.76□□□□□ -1.17
PDPN-212ENST00000621990 FAM201AQ5SY85 155 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 HIST1H2BHQ93079 126 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 ADTRPQ96IZ2 230 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 HIST1H2BNQ99877 126 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 HIST1H2BMQ99879 126 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 PYGO2Q9BRQ0 406 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 LSM4Q9Y4Z0 139 aaKnown RBP7.76□□□□□ -1.17
PDPN-212ENST00000621990 IFITM10A6NMD0 228 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 ZNF729A6NN14 1252 aaPredicted RBP7.76□□□□□ -1.17
PDPN-212ENST00000621990 HMGB3O15347 200 aaKnown RBP7.76□□□□□ -1.17
PDPN-212ENST00000621990 VENTXO95231 258 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 IL6RP08887 468 aaPredicted RBP7.76□□□□□ -1.17
PDPN-212ENST00000621990 RPL23P62829 140 aaKnown RBP7.76□□□□□ -1.17
PDPN-212ENST00000621990 ALKBH2Q6NS38 261 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 DUX4L9Q6RFH8 374 aaPredicted RBP7.76□□□□□ -1.17
PDPN-212ENST00000621990 FAM180AQ6UWF9 173 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 SSX9Q7RTT3 188 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 SVIPQ8NHG7 77 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 GATAD1Q8WUU5 269 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 SSX3Q99909 188 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 PARLQ9H300 379 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 DOK5Q9P104 306 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 TCF19Q9Y242 345 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 ATMQ13315 3056 aa7.76□□□□□ -1.17
PDPN-212ENST00000621990 YIF1AO95070 293 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 IFNA10P01566 189 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 PFN1P07737 140 aaKnown RBP7.75□□□□□ -1.17
PDPN-212ENST00000621990 TNFSF4P23510 183 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 ZNF383Q8NA42 475 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 C1orf159Q96HA4 380 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 MGST2Q99735 147 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 HEYLQ9NQ87 328 aaPredicted RBP7.75□□□□□ -1.17
PDPN-212ENST00000621990 PAGE4O60829 102 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 IGHV3-7P01780 117 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 TRGC2P03986 189 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 TDGF1P3P51864 188 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 BSXQ3C1V8 233 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 OR4A47Q6IF82 309 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 SLC16A13Q7RTY0 426 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 PRSS33Q8NF86 280 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 OR4F5Q8NH21 305 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 NANPQ8TBE9 248 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 LEAP2Q969E1 77 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 NEIL1Q96FI4 390 aaPredicted RBP7.75□□□□□ -1.17
PDPN-212ENST00000621990 RHOVQ96L33 236 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 OR4F4Q96R69 305 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 GGTLC1Q9BX51 225 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 ELOVL5Q9NYP7 299 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 IDI2-AS1Q9NZ38 188 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 PLCE1Q9P212 2302 aa7.75□□□□□ -1.17
PDPN-212ENST00000621990 FNDC10F2Z333 226 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 KLK10O43240 276 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 PDE6DO43924 150 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 B2MP61769 119 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 MRPS11P82912 194 aaKnown RBP7.74□□□□□ -1.17
PDPN-212ENST00000621990 ADIRFQ15847 76 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 NCMAPQ5T1S8 102 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 SLC25A48Q6ZT89 311 aaKnown RBP7.74□□□□□ -1.17
PDPN-212ENST00000621990 ZCCHC14Q8WYQ9 949 aaKnown RBP7.74□□□□□ -1.17
PDPN-212ENST00000621990 RPUSD4Q96CM3 377 aaKnown RBP7.74□□□□□ -1.17
PDPN-212ENST00000621990 MS4A5Q9H3V2 200 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 RPUSD1Q9UJJ7 312 aaKnown RBP7.74□□□□□ -1.17
PDPN-212ENST00000621990 DYSFO75923 2080 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 C11orf94C9JXX5 98 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 DEFA4P12838 97 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 BMP5P22003 454 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 NPPCP23582 126 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 HSPE1P61604 102 aaKnown RBP7.74□□□□□ -1.17
PDPN-212ENST00000621990 GCSAMLQ5JQS6 135 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 TMEM108Q6UXF1 575 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 C16orf82Q7Z2V1 217 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 DOLPP1Q86YN1 238 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 TGIF2LYQ8IUE0 185 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 ABHD12Q8N2K0 398 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 FAM216BQ8N7L0 139 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 OR10A7Q8NGE5 316 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 OR51G1Q8NGK1 321 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 ABHD5Q8WTS1 349 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 KCNIP2Q9NS61 270 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 JKAMPQ9P055 326 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 ZNF257Q9Y2Q1 563 aa7.74□□□□□ -1.17
PDPN-212ENST00000621990 ANKRD11Q6UB99 2663 aaPredicted RBP7.74□□□□□ -1.17
PDPN-212ENST00000621990 ELOA3CA0A087WX78 387 aaPredicted RBP7.73□□□□□ -1.17
PDPN-212ENST00000621990 TRAV38-1A0A0B4J264 116 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 A0A0G2JNJ9 132 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 TMPRSS2O15393 492 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 STAG3L2P0CL84 134 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 STAG3L3P0CL85 134 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 NBL1P41271 181 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 CCL13Q99616 98 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 TXNDC17Q9BRA2 123 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 Q9UFV3 132 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 C16orf97H3BN30 126 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 HRASP01112 189 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 GYPAP02724 150 aa7.73□□□□□ -1.17
PDPN-212ENST00000621990 NDUFA6P56556 154 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms