RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 ORAOV1Q8WV07 137 aa12.93□□□□□ -0.34
GPN1-212ENST00000616939 COQ2Q96H96 371 aa12.93□□□□□ -0.34
GPN1-212ENST00000616939 PCSK5Q92824 1860 aa12.93□□□□□ -0.34
GPN1-212ENST00000616939 DIDO1Q9BTC0 2240 aaKnown RBP12.93□□□□□ -0.34
GPN1-212ENST00000616939 CNTRLQ7Z7A1 2325 aa12.93□□□□□ -0.34
GPN1-212ENST00000616939 FAM166BA8MTA8 275 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 SLC17A3O00476 420 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 ADH4P08319 380 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 OTX2P32243 289 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 SUMO1P63165 101 aaKnown RBP12.92□□□□□ -0.34
GPN1-212ENST00000616939 SRYQ05066 204 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 TMEM136Q6ZRR5 245 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 C19orf35Q6ZS72 473 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 TIPARPQ7Z3E1 657 aaKnown RBP12.92□□□□□ -0.34
GPN1-212ENST00000616939 C11orf42Q8N5U0 333 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 NPVFQ9HCQ7 196 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 NRN1Q9NPD7 142 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 TBL2Q9Y4P3 447 aaKnown RBP12.92□□□□□ -0.34
GPN1-212ENST00000616939 DOCK10Q96BY6 2186 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 F2Z2F3 143 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 AQP7O14520 342 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 SIAH2O43255 324 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 GFRA3O60609 400 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 SMPD2O60906 423 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 IGLC2P0DOY2 106 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 IGLC3P0DOY3 106 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 DUTP33316 252 aaKnown RBP12.92□□□□□ -0.34
GPN1-212ENST00000616939 MRPL49Q13405 166 aaKnown RBP12.92□□□□□ -0.34
GPN1-212ENST00000616939 SSPNQ14714 243 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 SPATA45Q537H7 98 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 RNF114Q9Y508 228 aa12.92□□□□□ -0.34
GPN1-212ENST00000616939 HLA-DQA1P01909 254 aa12.91□□□□□ -0.34
GPN1-212ENST00000616939 SP1P08047 785 aa12.91□□□□□ -0.34
GPN1-212ENST00000616939 KIR2DS2P43631 304 aa12.91□□□□□ -0.34
GPN1-212ENST00000616939 DUSP3P51452 185 aaPredicted RBP12.91□□□□□ -0.34
GPN1-212ENST00000616939 PRAMEF5Q5TYX0 476 aa12.91□□□□□ -0.34
GPN1-212ENST00000616939 PRAMEF6Q5VXH4 476 aa12.91□□□□□ -0.34
GPN1-212ENST00000616939 DMRTA1Q5VZB9 504 aa12.91□□□□□ -0.34
GPN1-212ENST00000616939 KLHDC1Q8N7A1 406 aa12.91□□□□□ -0.34
GPN1-212ENST00000616939 OR4A16Q8NH70 328 aa12.91□□□□□ -0.34
GPN1-212ENST00000616939 DNAJC4Q9NNZ3 241 aa12.91□□□□□ -0.34
GPN1-212ENST00000616939 HEYLQ9NQ87 328 aaPredicted RBP12.91□□□□□ -0.34
GPN1-212ENST00000616939 TET2Q6N021 2002 aaPredicted RBP12.91□□□□□ -0.34
GPN1-212ENST00000616939 AMY1AP04745 511 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 HNF1AP20823 631 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 CXCL12P48061 93 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 PRRX1P54821 245 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 KRTDAPP60985 99 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 FOXF2Q12947 444 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 EFNB3Q15768 340 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 ST6GALNAC3Q8NDV1 305 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 C1orf159Q96HA4 380 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 TMEM167BQ9NRX6 74 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 COL27A1Q8IZC6 1860 aaPredicted RBP12.9□□□□□ -0.34
GPN1-212ENST00000616939 A0A1W2PS18 150 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 ZNF324O75467 553 aaPredicted RBP12.9□□□□□ -0.34
GPN1-212ENST00000616939 CEBPDP49716 269 aaPredicted RBP12.9□□□□□ -0.34
GPN1-212ENST00000616939 RELBQ01201 579 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 RAB31Q13636 194 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 BATFQ16520 125 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 ANKRD39Q53RE8 183 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 ACP7Q6ZNF0 438 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 GCNT2Q8N0V5 402 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 OR8I2Q8N0Y5 310 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 MRGPRDQ8TDS7 321 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 STARD4Q96DR4 205 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 CDX2Q99626 313 aaPredicted RBP12.9□□□□□ -0.34
GPN1-212ENST00000616939 MRPL27Q9P0M9 148 aaKnown RBP12.9□□□□□ -0.34
GPN1-212ENST00000616939 LOXL2Q9Y4K0 774 aa12.9□□□□□ -0.34
GPN1-212ENST00000616939 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.89□□□□□ -0.35
GPN1-212ENST00000616939 C20orf202A1L168 122 aa12.89□□□□□ -0.35
GPN1-212ENST00000616939 C15orf65H3BRN8 121 aa12.89□□□□□ -0.35
GPN1-212ENST00000616939 ISLRO14498 428 aa12.89□□□□□ -0.35
GPN1-212ENST00000616939 SPINT2O43291 252 aa12.89□□□□□ -0.35
GPN1-212ENST00000616939 TOMM40O96008 361 aa12.89□□□□□ -0.35
GPN1-212ENST00000616939 CELA3AP09093 270 aa12.89□□□□□ -0.35
GPN1-212ENST00000616939 AMTP48728 403 aa12.89□□□□□ -0.35
GPN1-212ENST00000616939 HNRNPA3P51991 378 aaKnown RBP12.89□□□□□ -0.35
GPN1-212ENST00000616939 ERVK-16P61578 105 aa12.89□□□□□ -0.35
GPN1-212ENST00000616939 AESQ08117 197 aa12.89□□□□□ -0.35
GPN1-212ENST00000616939 FAM53AQ6NSI3 398 aaPredicted RBP12.89□□□□□ -0.35
GPN1-212ENST00000616939 TEPPQ6URK8 271 aa12.89□□□□□ -0.35
GPN1-212ENST00000616939 STPG3Q8N7X2 389 aa12.89□□□□□ -0.35
GPN1-212ENST00000616939 OR5B3Q8NH48 314 aa12.89□□□□□ -0.35
GPN1-212ENST00000616939 CORO2AQ92828 525 aa12.89□□□□□ -0.35
GPN1-212ENST00000616939 ASCL3Q9NQ33 180 aa12.89□□□□□ -0.35
GPN1-212ENST00000616939 NAT8BQ9UHF3 227 aa12.89□□□□□ -0.35
GPN1-212ENST00000616939 PSG11Q9UQ72 335 aa12.89□□□□□ -0.35
GPN1-212ENST00000616939 LAMTOR2Q9Y2Q5 125 aa12.89□□□□□ -0.35
GPN1-212ENST00000616939 MRPS16Q9Y3D3 137 aaKnown RBP12.89□□□□□ -0.35
GPN1-212ENST00000616939 HYPMO75409 117 aa12.88□□□□□ -0.35
GPN1-212ENST00000616939 NDUFB8O95169 186 aa12.88□□□□□ -0.35
GPN1-212ENST00000616939 GPR12P47775 334 aa12.88□□□□□ -0.35
GPN1-212ENST00000616939 GNG4P50150 75 aa12.88□□□□□ -0.35
GPN1-212ENST00000616939 PRR20EP86478 221 aa12.88□□□□□ -0.35
GPN1-212ENST00000616939 PRR20CP86479 221 aa12.88□□□□□ -0.35
GPN1-212ENST00000616939 PRR20DP86480 221 aa12.88□□□□□ -0.35
GPN1-212ENST00000616939 PRR20BP86481 221 aa12.88□□□□□ -0.35
GPN1-212ENST00000616939 PRR20AP86496 221 aa12.88□□□□□ -0.35
GPN1-212ENST00000616939 CENPWQ5EE01 88 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms