RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 SMIM6P0DI80 62 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 HIST1H1DP16402 221 aaKnown RBP2.64□□□□□ -1.99
ZNF540-207ENST00000589285 CCL1P22362 96 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 RPL31P62899 125 aaKnown RBP2.64□□□□□ -1.99
ZNF540-207ENST00000589285 PNRC1Q12796 327 aaPredicted RBP2.64□□□□□ -1.99
ZNF540-207ENST00000589285 DIAPH2-AS1Q14236 149 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 SPINK9Q5DT21 86 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 RNASE10Q5GAN6 216 aaKnown RBP2.64□□□□□ -1.99
ZNF540-207ENST00000589285 LAMTOR1Q6IAA8 161 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 ACP7Q6ZNF0 438 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 ZSCAN4Q8NAM6 433 aaPredicted RBP2.64□□□□□ -1.99
ZNF540-207ENST00000589285 OR52M1Q8NGK5 317 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 OR4C16Q8NGL9 310 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 MARCH1Q8TCQ1 289 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 DNTTIP1Q9H147 329 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 TAF9BQ9HBM6 251 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 SDHAF2Q9NX18 166 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 CLEC5AQ9NY25 188 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 RAB22AQ9UL26 194 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 TBC1D24Q9ULP9 559 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 POLDIP2Q9Y2S7 368 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 OOEPA6NGQ2 149 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 TMEM14DPA8MWL7 114 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 SMLR1H3BR10 107 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 SLC22A5O76082 557 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 GAGE7O76087 117 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 CST4P01036 141 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 IGLV3-1P01715 115 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 C1QBP02746 253 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 FBP1P09467 338 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 GAGE12FP0CL80 117 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 GAGE12GP0CL81 117 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 GAGE12IP0CL82 117 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 PGA5P0DJD9 388 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 FUT3P21217 361 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 KITLGP21583 273 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 ZP3P21754 424 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 FCGR2CP31995 323 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 LUMP51884 338 aaPredicted RBP2.64□□□□□ -1.99
ZNF540-207ENST00000589285 BTG1P62324 171 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 ZNF415Q09FC8 603 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 IL24Q13007 206 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 GAGE1Q13065 139 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 GAGE4Q13068 117 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 SLAQ13239 276 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 TMEM42Q69YG0 159 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 VKORC1L1Q8N0U8 176 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 ZNF561Q8N587 486 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 BPIFCQ8NFQ6 507 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 NRIP2Q9BQI9 281 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 ZNF2Q9BSG1 426 aaPredicted RBP2.64□□□□□ -1.99
ZNF540-207ENST00000589285 CCDC32Q9BV29 185 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 HINT2Q9BX68 163 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 SRRQ9GZT4 340 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 PLEKHF2Q9H8W4 249 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 BIN3Q9NQY0 253 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 ABRACLQ9P1F3 81 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 PSG11Q9UQ72 335 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 ALG5Q9Y673 324 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 IGLV5-45A0A087WSX0 123 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 SRRM5B3KS81 715 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 H7C2Y5 167 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 PLA2G10O15496 165 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 LYRM1O43325 122 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 NDUFB3O43676 98 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 ENSAO43768 121 aaKnown RBP2.64□□□□□ -1.99
ZNF540-207ENST00000589285 PDCD6O75340 191 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 FCN3O75636 299 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 IFNA4P05014 189 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 WNT2P09544 360 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 OR5H8P0DN80 308 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 CEACAM6P40199 344 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 FGF12P61328 243 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 CLEC12BQ2HXU8 276 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 LBHQ53QV2 105 aaPredicted RBP2.64□□□□□ -1.99
ZNF540-207ENST00000589285 C1orf100Q5SVJ3 147 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 STEAP1BQ6NZ63 245 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 SPNS3Q6ZMD2 512 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 SMIM15Q7Z3B0 74 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 OR2W3Q7Z3T1 314 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 COMMD7Q86VX2 200 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 SELENOHQ8IZQ5 122 aaKnown RBP2.64□□□□□ -1.99
ZNF540-207ENST00000589285 LYG1Q8N1E2 194 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 RPS4Y2Q8TD47 263 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 FAM222BQ8WU58 562 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 COQ2Q96H96 371 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 SEC22AQ96IW7 307 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 CLCC1Q96S66 551 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 SHARPINQ9H0F6 387 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 GLS2Q9UI32 602 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 NSG2Q9Y328 171 aa2.64□□□□□ -1.99
ZNF540-207ENST00000589285 IGKV1D-13A0A0B4J2D9 117 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 C13orf42A0A1B0GVH6 325 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 C12orf77C9JDV5 145 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 ITGB1BP1O14713 200 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 S100A8P05109 93 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 HOXB5P09067 269 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 IGKV1-13P0DP09 117 aa2.63□□□□□ -1.99
ZNF540-207ENST00000589285 LOXP28300 417 aaPredicted RBP2.63□□□□□ -1.99
ZNF540-207ENST00000589285 CDKN1BP46527 198 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms