RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 HPCAP84074 193 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 EMX1Q04741 257 aaPredicted RBP0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 AKR1C1Q04828 323 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 TMEM267Q0VDI3 215 aaPredicted RBP0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 GNA13Q14344 377 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 IMPG1Q17R60 797 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 ZNF791Q3KP31 576 aaPredicted RBP0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 FAM201AQ5SY85 155 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 SPOPLQ6IQ16 392 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 GLT6D1Q7Z4J2 308 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 ATP5L2Q7Z4Y8 100 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 NAA40Q86UY6 237 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 C1orf174Q8IYL3 243 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 TMEM156Q8N614 296 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 UBL4BQ8N7F7 174 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 LHFPL5Q8TAF8 219 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 HAVCR2Q8TDQ0 301 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 RAB8BQ92930 207 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 PTH2Q96A98 100 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 ROPN1LQ96C74 230 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 IMP4Q96G21 291 aaKnown RBP0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 C8orf76Q96K31 380 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 OR52E6Q96RD3 313 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 MIEN1Q9BRT3 115 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 DERL2Q9GZP9 239 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 MS4A6AQ9H2W1 248 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 MAP1LC3AQ9H492 121 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 UCK1Q9HA47 277 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 HRASLSQ9HDD0 168 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 DKKL1Q9UK85 242 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 GUCA1BQ9UMX6 200 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 HDGFL3Q9Y3E1 203 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 PCYT1BQ9Y5K3 369 aaPredicted RBP0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 ANAPC1Q9H1A4 1944 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 EML6Q6ZMW3 1958 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 ADCY9O60503 1353 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 DCCP43146 1447 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 RP1P56715 2156 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 FREM1Q5H8C1 2179 aa0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 INTS1Q8N201 2190 aaKnown RBP0.55□□□□□ -2.32
SMCHD1-206ENST00000581631 ZNF106Q9H2Y7 1883 aaKnown RBP0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 MYLKQ15746 1914 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 TMSB15BA0A087X1C1 80 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 IGHV3-15A0A0B4J1V0 119 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 OR4C45A6NMZ5 311 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 ZNF705FA8MVS1 300 aaPredicted RBP0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 OR11H12B2RN74 326 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 C21orf140B9A014 251 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 F8W036 122 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 CXCR6O00574 342 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 MRASO14807 208 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 UBE2L6O14933 153 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 RPP14O95059 124 aaKnown RBP0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 HLA-DRAP01903 254 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 FAM228BP0C875 321 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 ZNF705DP0CH99 300 aaPredicted RBP0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 ZNF705BP0CI00 300 aaPredicted RBP0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 HIST1H1EP10412 219 aaKnown RBP0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 CD79AP11912 226 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 PSMB8P28062 276 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 CCR7P32248 378 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 BLVRAP53004 296 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 CLDN12P56749 244 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 TMEM33P57088 247 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 TAS2R20P59543 309 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 PSME3P61289 254 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 NAA20P61599 178 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 TBPL1P62380 186 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 POLR2GP62487 172 aaKnown RBP eCLIP0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 GNA12Q03113 381 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 RELAQ04206 551 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 FABP9Q0Z7S8 132 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 PPP1R1AQ13522 171 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 ACSM3Q53FZ2 586 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 PABPC1L2AQ5JQF8 200 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 CDKL4Q5MAI5 379 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 SBSNQ6UWP8 590 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 AMTNQ6UX39 209 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 Q6ZTI0 123 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 RASSF6Q6ZTQ3 369 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 HIST2H3AQ71DI3 136 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 SPATA12Q7Z6I5 190 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 LRRC28Q86X40 367 aaPredicted RBP0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 BAP18Q8IXM2 172 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 LRRC34Q8IZ02 419 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 C1orf158Q8N1D5 194 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 SLC22A24Q8N4F4 322 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 ZNF283Q8N7M2 679 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 CNEP1R1Q8N9A8 125 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 TMEM161BQ8NDZ6 487 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 OR1M1Q8NGA1 313 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 OR11H2Q8NH07 326 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 C12orf43Q96C57 262 aaKnown RBP0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 CCL13Q99616 98 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 FAM96AQ9H5X1 160 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 RSL24D1Q9UHA3 163 aaKnown RBP0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 EVC2Q86UK5 1308 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 KIF15Q9NS87 1388 aa0.54□□□□□ -2.32
SMCHD1-206ENST00000581631 NUP210LQ5VU65 1888 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms