RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 PLAUP00749 431 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 CGAP01215 116 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 MPV17P39210 176 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 NIT1Q86X76 327 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 VKORC1L1Q8N0U8 176 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 RAB37Q96AX2 223 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 IGKV1-12A0A0C4DH73 117 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 C17orf98A8MV24 154 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 B4E171 279 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 K7ESF4 209 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 IGKV1D-12P01611 117 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 LINC00614P0C842 121 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 TSPAN7P41732 249 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 SLC25A45Q8N413 288 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 TMEM116Q8NCL8 245 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 PGLYRP4Q96LB8 373 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 PEF1Q9UBV8 284 aaKnown RBP11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 HEATR5AQ86XA9 2040 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 ASXL3Q9C0F0 2248 aa11.12□□□□□ -0.63
PCDHGB3-201ENST00000576222 LOC389332A0A1B0GUA5 103 aa11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 RND2P52198 227 aa11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 UCP2P55851 309 aa11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 SELENOTP62341 195 aa11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 TMEM256Q8N2U0 113 aa11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 VWCEQ96DN2 955 aa11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 SMIM12Q96EX1 92 aa11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 CHCHD2Q9Y6H1 151 aaPredicted RBP11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 PHF3Q92576 2039 aaKnown RBP11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 ZNF785A8K8V0 405 aa11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 FAM90A2PQ658T7 463 aa11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 OR4C46A6NHA9 309 aa11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 MT-CO3P00414 261 aa11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 ACP1P24666 158 aa11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 FOXA3P55318 350 aaPredicted RBP11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 RPL11P62913 178 aaKnown RBP11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 NMSQ5H8A3 153 aa11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 PRNTQ86SH4 94 aa11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 ST6GALNAC6Q969X2 333 aa11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 REPIN1Q9BWE0 567 aaKnown RBP11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 SAPCD1Q5SSQ6 148 aa11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 RPP25LQ8N5L8 163 aaKnown RBP11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 TMEM208Q9BTX3 173 aa11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 CFHR5Q9BXR6 569 aa11.11□□□□□ -0.63
PCDHGB3-201ENST00000576222 FANCMQ8IYD8 2048 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 TMSB15BA0A087X1C1 80 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 MKRN2OSH3BPM6 223 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 M0R296 226 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 TMPRSS2O15393 492 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 HYPMO75409 117 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 HGFACQ04756 655 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 TMEM177Q53S58 311 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 ARL6IP6Q8N6S5 226 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 C19orf24Q9BVV8 132 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 ICE1Q9Y2F5 2266 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 PCOLCEQ15113 449 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 OCC1Q8TAD7 63 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 C1QTNF5Q9BXJ0 243 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 C12orf77C9JDV5 145 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 TIAF1O95411 115 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 CA7P43166 264 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 SGK494Q96LW2 274 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 MS4A5Q9H3V2 200 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 ASCL3Q9NQ33 180 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 S100A4P26447 101 aaKnown RBP11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 SSTR5P35346 364 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 FAM131CQ96AQ9 280 aa11.1□□□□□ -0.63
PCDHGB3-201ENST00000576222 WDR90Q96KV7 1748 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 GDF9O60383 454 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 LYRM7Q5U5X0 104 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 TEX38Q6PEX7 206 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 ZNF441Q8N8Z8 693 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 RPEQ96AT9 228 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 RNF7Q9UBF6 113 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 Q1RN00 199 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 C5orf63A6NC05 138 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 EFNA2O43921 213 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 ZNF324O75467 553 aaPredicted RBP11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 ACTL10Q5JWF8 245 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 CDCP2Q5VXM1 449 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 ERASQ7Z444 233 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 TTTY12Q9BZ98 90 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 TRAV17A0A0B4J275 112 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 LIPFP07098 398 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 PTGDSP41222 190 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 TDGF1P3P51864 188 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 FOXL1Q12952 345 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 FBLN7Q53RD9 439 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 SLC35E4Q6ICL7 350 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 RASL11BQ9BPW5 248 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 MESP1Q9BRJ9 268 aa11.09□□□□□ -0.63
PCDHGB3-201ENST00000576222 CCL17Q92583 94 aa11.08□□□□□ -0.64
PCDHGB3-201ENST00000576222 ZNF430Q9H8G1 570 aaPredicted RBP11.08□□□□□ -0.64
PCDHGB3-201ENST00000576222 HBBP68871 147 aa11.08□□□□□ -0.64
PCDHGB3-201ENST00000576222 LINC01551Q86U37 167 aa11.08□□□□□ -0.64
PCDHGB3-201ENST00000576222 FADS6Q8N9I5 356 aa11.08□□□□□ -0.64
PCDHGB3-201ENST00000576222 SEMA5BQ9P283 1151 aa11.08□□□□□ -0.64
PCDHGB3-201ENST00000576222 IGHV3-21A0A0B4J1V1 117 aa11.08□□□□□ -0.64
PCDHGB3-201ENST00000576222 A0A1W2PR77 199 aa11.08□□□□□ -0.64
PCDHGB3-201ENST00000576222 CD33P20138 364 aa11.08□□□□□ -0.64
PCDHGB3-201ENST00000576222 REG1BP48304 166 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms