RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 UNQ6494/PRO21346Q6UXR6 183 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 KLHDC9Q8NEP7 349 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 DOCK6Q96HP0 2047 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 RPP21Q9H633 154 aaKnown RBP5.36□□□□□ -1.55
CLK3-212ENST00000563418 DOCK4Q8N1I0 1966 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 PRRC2BQ5JSZ5 2229 aaKnown RBP5.36□□□□□ -1.55
CLK3-212ENST00000563418 PGLYRP1O75594 196 aaPredicted RBP5.36□□□□□ -1.55
CLK3-212ENST00000563418 PPP1R17O96001 155 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 REG1BP48304 166 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 FNDC7Q5VTL7 733 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 CDPF1Q6NVV7 123 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 WFDC1Q9HC57 220 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 MPC1Q9Y5U8 109 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 TRAV8-1A0A0A6YYK1 113 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 LINC01549A6NIU2 74 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 ZNF716A6NP11 495 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 CEACAM18A8MTB9 384 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 KLKB1P03952 638 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 LGALS3P17931 250 aaKnown RBP5.36□□□□□ -1.55
CLK3-212ENST00000563418 WBP1Q96G27 269 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 C11orf68Q9H3H3 251 aaKnown RBP5.36□□□□□ -1.55
CLK3-212ENST00000563418 SAA2-SAA4A0A096LPE2 208 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 A0A1W2PS18 150 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 C8orf88P0DMB2 117 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 GUSBP1Q15486 140 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 ZNF645Q8N7E2 425 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 BMPERQ8N8U9 685 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 FGF11Q92914 225 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 TMEM140Q9NV12 185 aa5.36□□□□□ -1.55
CLK3-212ENST00000563418 BOKQ9UMX3 212 aaPredicted RBP5.36□□□□□ -1.55
CLK3-212ENST00000563418 BTAF1O14981 1849 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 A0A087X0K7 114 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 HOXB2P14652 356 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 WDR82Q6UXN9 313 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 LHFPL1Q86WI0 220 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 SAXO1Q8IYX7 474 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 ORMDL3Q8N138 153 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 BCL6BQ8N143 479 aaPredicted RBP5.35□□□□□ -1.55
CLK3-212ENST00000563418 TSKUQ8WUA8 353 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 VOPP1Q96AW1 172 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 SMAD7O15105 426 aaKnown RBP5.35□□□□□ -1.55
CLK3-212ENST00000563418 COX8AP10176 69 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 P2RY2P41231 377 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 DEFB110Q30KQ9 67 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 CDCP2Q5VXM1 449 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 TMEM25Q86YD3 366 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 OR9G1Q8NH87 305 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 HIGD1CA8MV81 97 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 DPM2O94777 84 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 BGLAPP02818 100 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 CD46P15529 392 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 PSG6Q00889 435 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 CCDC144NLQ6NUI1 221 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 RPS19BP1Q86WX3 136 aaKnown RBP5.35□□□□□ -1.55
CLK3-212ENST00000563418 C9JQL5 133 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 DRD3P35462 400 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 KLRD1Q13241 179 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 OR13H1Q8NG92 308 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 ATP6V0E2Q8NHE4 81 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 OBP2AQ9NY56 170 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 EIF4EBP2Q13542 120 aaPredicted RBP5.35□□□□□ -1.55
CLK3-212ENST00000563418 VMA21Q3ZAQ7 101 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 ZPLD1Q8TCW7 415 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 PGLYRP4Q96LB8 373 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 DOCK9Q9BZ29 2069 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 TRPM6Q9BX84 2022 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 KLF17Q5JT82 389 aaPredicted RBP5.35□□□□□ -1.55
CLK3-212ENST00000563418 STPG3Q8N7X2 389 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 FBXL7Q9UJT9 491 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 PILRBQ9UKJ0 227 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 A0A1W2PR80 420 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 LOC389332A0A1B0GUA5 103 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 LGALS4P56470 323 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 DMRTC1Q5HYR2 192 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 SFTPA2Q8IWL1 248 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 SFTPA1Q8IWL2 248 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 UBALD2Q8IYN6 164 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 GATAD1Q8WUU5 269 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 RARRES3Q9UL19 164 aa5.35□□□□□ -1.55
CLK3-212ENST00000563418 NGFP01138 241 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 PGFP49763 221 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 ADIPOQQ15848 244 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 MEIG1Q5JSS6 88 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 TIMD4Q96H15 378 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 VSTM2LQ96N03 204 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 B5MCH6 92 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 COLQQ9Y215 455 aaPredicted RBP5.34□□□□□ -1.55
CLK3-212ENST00000563418 RNF115Q9Y4L5 304 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 IGHV1-24A0A0C4DH33 117 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 FNDC10F2Z333 226 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 CEACAM3P40198 252 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 SYT8Q8NBV8 401 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 GFI1Q99684 422 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 SCO2A0A1W2PP80 73 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 TIMM8AO60220 97 aaPredicted RBP5.34□□□□□ -1.55
CLK3-212ENST00000563418 FCGR3BO75015 233 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 ID3Q02535 119 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 TAL2Q16559 108 aa5.34□□□□□ -1.55
CLK3-212ENST00000563418 ZNF775Q96BV0 537 aaPredicted RBP5.34□□□□□ -1.55
CLK3-212ENST00000563418 EPDR1Q9UM22 224 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms