RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 APELAP0DMC3 54 aa2.55□□□□□ -2
CHD8-212ENST00000557329 PRB4P10163 310 aaPredicted RBP2.55□□□□□ -2
CHD8-212ENST00000557329 AREGP15514 252 aa2.55□□□□□ -2
CHD8-212ENST00000557329 ELK1P19419 428 aa2.55□□□□□ -2
CHD8-212ENST00000557329 CD34P28906 385 aa2.55□□□□□ -2
CHD8-212ENST00000557329 CD1BP29016 333 aa2.55□□□□□ -2
CHD8-212ENST00000557329 HTR1FP30939 366 aa2.55□□□□□ -2
CHD8-212ENST00000557329 OTX1P32242 354 aaPredicted RBP2.55□□□□□ -2
CHD8-212ENST00000557329 ALDH3B2P48448 385 aa2.55□□□□□ -2
CHD8-212ENST00000557329 SELENOWP63302 87 aa2.55□□□□□ -2
CHD8-212ENST00000557329 PKD1P98161 4303 aa2.55□□□□□ -2
CHD8-212ENST00000557329 Q5VSD8 79 aa2.55□□□□□ -2
CHD8-212ENST00000557329 PVRIGQ6DKI7 326 aa2.55□□□□□ -2
CHD8-212ENST00000557329 PYHIN1Q6K0P9 492 aa2.55□□□□□ -2
CHD8-212ENST00000557329 SLC38A6Q8IZM9 456 aa2.55□□□□□ -2
CHD8-212ENST00000557329 FAM58AQ8N1B3 248 aa2.55□□□□□ -2
CHD8-212ENST00000557329 MNS1Q8NEH6 495 aa2.55□□□□□ -2
CHD8-212ENST00000557329 OR8H1Q8NGG4 311 aa2.55□□□□□ -2
CHD8-212ENST00000557329 OR11H2Q8NH07 326 aa2.55□□□□□ -2
CHD8-212ENST00000557329 OR4A16Q8NH70 328 aa2.55□□□□□ -2
CHD8-212ENST00000557329 GRPEL2Q8TAA5 225 aa2.55□□□□□ -2
CHD8-212ENST00000557329 RTN4IP1Q8WWV3 396 aaPredicted RBP2.55□□□□□ -2
CHD8-212ENST00000557329 FAM46BQ96A09 425 aa2.55□□□□□ -2
CHD8-212ENST00000557329 BORCS8Q96FH0 119 aa2.55□□□□□ -2
CHD8-212ENST00000557329 SPACA5Q96QH8 159 aa2.55□□□□□ -2
CHD8-212ENST00000557329 AMELYQ99218 206 aa2.55□□□□□ -2
CHD8-212ENST00000557329 PHB2Q99623 299 aa2.55□□□□□ -2
CHD8-212ENST00000557329 CGREF1Q99674 301 aa2.55□□□□□ -2
CHD8-212ENST00000557329 PARP12Q9H0J9 701 aaKnown RBP2.55□□□□□ -2
CHD8-212ENST00000557329 CST11Q9H112 138 aa2.55□□□□□ -2
CHD8-212ENST00000557329 OR52D1Q9H346 318 aa2.55□□□□□ -2
CHD8-212ENST00000557329 RBFOX1Q9NWB1 397 aaKnown RBP2.55□□□□□ -2
CHD8-212ENST00000557329 COA4Q9NYJ1 87 aa2.55□□□□□ -2
CHD8-212ENST00000557329 CALYQ9NYX4 217 aa2.55□□□□□ -2
CHD8-212ENST00000557329 MTCH1Q9NZJ7 389 aa2.55□□□□□ -2
CHD8-212ENST00000557329 TRAV10A0A0B4J240 114 aa2.54□□□□□ -2
CHD8-212ENST00000557329 PQLC2LA1A4F0 135 aa2.54□□□□□ -2
CHD8-212ENST00000557329 C11orf94C9JXX5 98 aa2.54□□□□□ -2
CHD8-212ENST00000557329 H7C2Y5 167 aa2.54□□□□□ -2
CHD8-212ENST00000557329 FFAR1O14842 300 aa2.54□□□□□ -2
CHD8-212ENST00000557329 BIRC5O15392 142 aa2.54□□□□□ -2
CHD8-212ENST00000557329 NBR2O15453 112 aa2.54□□□□□ -2
CHD8-212ENST00000557329 AIREO43918 545 aa2.54□□□□□ -2
CHD8-212ENST00000557329 NOS1APO75052 506 aaPredicted RBP2.54□□□□□ -2
CHD8-212ENST00000557329 SERPINA3P01011 423 aa2.54□□□□□ -2
CHD8-212ENST00000557329 TRBV12-3P01733 135 aa2.54□□□□□ -2
CHD8-212ENST00000557329 HLA-DMBP28068 263 aa2.54□□□□□ -2
CHD8-212ENST00000557329 ERP29P30040 261 aaKnown RBP2.54□□□□□ -2
CHD8-212ENST00000557329 KDELR2P33947 212 aa2.54□□□□□ -2
CHD8-212ENST00000557329 OMPP47874 163 aa2.54□□□□□ -2
CHD8-212ENST00000557329 HCCSP53701 268 aa2.54□□□□□ -2
CHD8-212ENST00000557329 ZNF85Q03923 595 aa2.54□□□□□ -2
CHD8-212ENST00000557329 ZNF816Q0VGE8 651 aaPredicted RBP2.54□□□□□ -2
CHD8-212ENST00000557329 PPP1R8Q12972 351 aaKnown RBP2.54□□□□□ -2
CHD8-212ENST00000557329 IL24Q13007 206 aa2.54□□□□□ -2
CHD8-212ENST00000557329 PRR4Q16378 134 aa2.54□□□□□ -2
CHD8-212ENST00000557329 DEFB114Q30KQ6 69 aa2.54□□□□□ -2
CHD8-212ENST00000557329 LGALS9BQ3B8N2 356 aa2.54□□□□□ -2
CHD8-212ENST00000557329 C2orf76Q3KRA6 126 aa2.54□□□□□ -2
CHD8-212ENST00000557329 SAMD4BQ5PRF9 694 aaKnown RBP2.54□□□□□ -2
CHD8-212ENST00000557329 ZNF57Q68EA5 555 aaPredicted RBP2.54□□□□□ -2
CHD8-212ENST00000557329 DLEU7Q6UYE1 221 aa2.54□□□□□ -2
CHD8-212ENST00000557329 IL34Q6ZMJ4 242 aa2.54□□□□□ -2
CHD8-212ENST00000557329 Q6ZVH6 145 aa2.54□□□□□ -2
CHD8-212ENST00000557329 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
CHD8-212ENST00000557329 MOB1BQ7L9L4 216 aa2.54□□□□□ -2
CHD8-212ENST00000557329 KRTAP11-1Q8IUC1 163 aa2.54□□□□□ -2
CHD8-212ENST00000557329 FUNDC1Q8IVP5 155 aa2.54□□□□□ -2
CHD8-212ENST00000557329 OFCC1Q8IZS5 231 aa2.54□□□□□ -2
CHD8-212ENST00000557329 RNF148Q8N7C7 305 aa2.54□□□□□ -2
CHD8-212ENST00000557329 MINDY2Q8NBR6 621 aa2.54□□□□□ -2
CHD8-212ENST00000557329 OR1L6Q8NGR2 347 aa2.54□□□□□ -2
CHD8-212ENST00000557329 OR2K2Q8NGT1 345 aa2.54□□□□□ -2
CHD8-212ENST00000557329 MYOZ3Q8TDC0 251 aa2.54□□□□□ -2
CHD8-212ENST00000557329 NEK7Q8TDX7 302 aa2.54□□□□□ -2
CHD8-212ENST00000557329 ARL11Q969Q4 196 aa2.54□□□□□ -2
CHD8-212ENST00000557329 TMEM106AQ96A25 262 aa2.54□□□□□ -2
CHD8-212ENST00000557329 MRPL53Q96EL3 112 aaKnown RBP2.54□□□□□ -2
CHD8-212ENST00000557329 TEAD3Q99594 435 aa2.54□□□□□ -2
CHD8-212ENST00000557329 SH3GL1Q99961 368 aa2.54□□□□□ -2
CHD8-212ENST00000557329 CHRDL1Q9BU40 450 aa2.54□□□□□ -2
CHD8-212ENST00000557329 NDUFAF3Q9BU61 184 aa2.54□□□□□ -2
CHD8-212ENST00000557329 C6orf62Q9GZU0 229 aaPredicted RBP2.54□□□□□ -2
CHD8-212ENST00000557329 PBOV1Q9GZY1 135 aa2.54□□□□□ -2
CHD8-212ENST00000557329 FBXL15Q9H469 300 aa2.54□□□□□ -2
CHD8-212ENST00000557329 KAT8Q9H7Z6 458 aaKnown RBP2.54□□□□□ -2
CHD8-212ENST00000557329 HES4Q9HCC6 221 aa2.54□□□□□ -2
CHD8-212ENST00000557329 GNG12Q9UBI6 72 aa2.54□□□□□ -2
CHD8-212ENST00000557329 KIF25Q9UIL4 384 aa2.54□□□□□ -2
CHD8-212ENST00000557329 LAMP5Q9UJQ1 280 aa2.54□□□□□ -2
CHD8-212ENST00000557329 IKZF2Q9UKS7 526 aa2.54□□□□□ -2
CHD8-212ENST00000557329 TP53TG1Q9Y2A0 90 aa2.54□□□□□ -2
CHD8-212ENST00000557329 V9GYQ6 96 aa2.54□□□□□ -2
CHD8-212ENST00000557329 SRRM2Q9UQ35 2752 aaKnown RBP2.53□□□□□ -2
CHD8-212ENST00000557329 IGKV3-7A0A075B6H7 116 aa2.53□□□□□ -2
CHD8-212ENST00000557329 DEFB131BA0A096LNP1 70 aa2.53□□□□□ -2
CHD8-212ENST00000557329 TRBV2A0A0J9YWF9 115 aa2.53□□□□□ -2
CHD8-212ENST00000557329 H0YJX3 145 aa2.53□□□□□ -2
CHD8-212ENST00000557329 FCN1O00602 326 aa2.53□□□□□ -2
CHD8-212ENST00000557329 ARPC3O15145 178 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms