RNA–Protein interactions for RNA: ENST00000556825.5

SHMT2-226, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-226ENST00000556825 SAP30LQ9HAJ7 183 aa11.56□□□□□ -0.56
SHMT2-226ENST00000556825 R4GN57 208 aa11.56□□□□□ -0.56
SHMT2-226ENST00000556825 KIAA0100Q14667 2235 aaKnown RBP11.56□□□□□ -0.56
SHMT2-226ENST00000556825 IAPPP10997 89 aa11.56□□□□□ -0.56
SHMT2-226ENST00000556825 GNG3P63215 75 aa11.56□□□□□ -0.56
SHMT2-226ENST00000556825 FAM162BQ5T6X4 162 aa11.56□□□□□ -0.56
SHMT2-226ENST00000556825 FAM69BQ5VUD6 431 aa11.56□□□□□ -0.56
SHMT2-226ENST00000556825 CRIP3Q6Q6R5 217 aa11.56□□□□□ -0.56
SHMT2-226ENST00000556825 PRSS41Q7RTY9 318 aa11.56□□□□□ -0.56
SHMT2-226ENST00000556825 SH2D6Q7Z4S9 175 aa11.56□□□□□ -0.56
SHMT2-226ENST00000556825 WDR5BQ86VZ2 330 aa11.56□□□□□ -0.56
SHMT2-226ENST00000556825 RERGQ96A58 199 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-226ENST00000556825 RABAC1Q9UI14 185 aa11.56□□□□□ -0.56
SHMT2-226ENST00000556825 C19orf67A6NJJ6 358 aa11.55□□□□□ -0.56
SHMT2-226ENST00000556825 DRD3P35462 400 aa11.55□□□□□ -0.56
SHMT2-226ENST00000556825 RPS18P62269 152 aaKnown RBP11.55□□□□□ -0.56
SHMT2-226ENST00000556825 ETDBQ3ZM63 59 aa11.55□□□□□ -0.56
SHMT2-226ENST00000556825 Q96M66 194 aa11.55□□□□□ -0.56
SHMT2-226ENST00000556825 CITED2Q99967 270 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-226ENST00000556825 TXNIPQ9H3M7 391 aa11.55□□□□□ -0.56
SHMT2-226ENST00000556825 SCO2A0A1W2PP80 73 aa11.55□□□□□ -0.56
SHMT2-226ENST00000556825 C9JCJ5 164 aa11.55□□□□□ -0.56
SHMT2-226ENST00000556825 IGHV3-7P01780 117 aa11.55□□□□□ -0.56
SHMT2-226ENST00000556825 CT62P0C5K7 136 aa11.55□□□□□ -0.56
SHMT2-226ENST00000556825 FCGR2BP31994 310 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-226ENST00000556825 TMEM42Q69YG0 159 aa11.55□□□□□ -0.56
SHMT2-226ENST00000556825 ACP7Q6ZNF0 438 aa11.55□□□□□ -0.56
SHMT2-226ENST00000556825 RAB42Q8N4Z0 105 aa11.55□□□□□ -0.56
SHMT2-226ENST00000556825 BADQ92934 168 aa11.55□□□□□ -0.56
SHMT2-226ENST00000556825 C20orf78Q9BR46 151 aa11.55□□□□□ -0.56
SHMT2-226ENST00000556825 A0A0G2JRQ6 117 aa11.54□□□□□ -0.56
SHMT2-226ENST00000556825 A0A1W2PRD5 423 aa11.54□□□□□ -0.56
SHMT2-226ENST00000556825 A0A1W2PRF3 423 aa11.54□□□□□ -0.56
SHMT2-226ENST00000556825 A0A1W2PRM7 423 aa11.54□□□□□ -0.56
SHMT2-226ENST00000556825 F5H5K5 113 aa11.54□□□□□ -0.56
SHMT2-226ENST00000556825 FOXS1O43638 330 aa11.54□□□□□ -0.56
SHMT2-226ENST00000556825 SMIM13P0DJ93 91 aa11.54□□□□□ -0.56
SHMT2-226ENST00000556825 VDAC2P45880 294 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-226ENST00000556825 Q6ZUT4 128 aa11.54□□□□□ -0.56
SHMT2-226ENST00000556825 TUSC5Q8IXB3 177 aa11.54□□□□□ -0.56
SHMT2-226ENST00000556825 TCEAL8Q8IYN2 117 aa11.54□□□□□ -0.56
SHMT2-226ENST00000556825 VCX2Q9H322 139 aa11.54□□□□□ -0.56
SHMT2-226ENST00000556825 TRPM6Q9BX84 2022 aa11.54□□□□□ -0.56
SHMT2-226ENST00000556825 OBSL1O75147 1896 aa11.54□□□□□ -0.56
SHMT2-226ENST00000556825 IFI6P09912 130 aa11.54□□□□□ -0.56
SHMT2-226ENST00000556825 FGF6P10767 208 aa11.54□□□□□ -0.56
SHMT2-226ENST00000556825 KIR2DL2P43627 348 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-226ENST00000556825 TXNDC8Q6A555 127 aa11.54□□□□□ -0.56
SHMT2-226ENST00000556825 PARM1Q6UWI2 310 aa11.54□□□□□ -0.56
SHMT2-226ENST00000556825 PTPRSQ13332 1948 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 KIAA1549LQ6ZVL6 1849 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 TRAV25A0A0B4J276 109 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 CXorf51AA0A1B0GTR3 108 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 GAGE12JA6NER3 117 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 GAGE7O76087 117 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 OR7C1O76099 320 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-226ENST00000556825 GAGE12FP0CL80 117 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 GAGE12GP0CL81 117 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 GAGE12IP0CL82 117 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 SMIM10L1P0DMW3 83 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 SLC35B1P78383 322 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 GAGE4Q13068 117 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 CATR1Q13166 79 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 PDLIM3Q53GG5 364 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-226ENST00000556825 GCSAMLQ5JQS6 135 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 PRR31Q5SQ13 230 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 Q6ZS49 121 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 LINC00173Q6ZV60 143 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 VN1R2Q8NFZ6 395 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 H1FXQ92522 213 aaKnown RBP11.53□□□□□ -0.56
SHMT2-226ENST00000556825 SMIM10Q96HG1 83 aa11.53□□□□□ -0.56
SHMT2-226ENST00000556825 ZNF331Q9NQX6 463 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-226ENST00000556825 NRG2O14511 850 aaPredicted RBP11.52□□□□□ -0.56
SHMT2-226ENST00000556825 WIPF1O43516 503 aa11.52□□□□□ -0.56
SHMT2-226ENST00000556825 LEPROTL1O95214 131 aa11.52□□□□□ -0.56
SHMT2-226ENST00000556825 NHLRC4P0CG21 123 aaPredicted RBP11.52□□□□□ -0.56
SHMT2-226ENST00000556825 MGST1P10620 155 aaKnown RBP11.52□□□□□ -0.56
SHMT2-226ENST00000556825 INSL3P51460 131 aa11.52□□□□□ -0.56
SHMT2-226ENST00000556825 TCL1AP56279 114 aa11.52□□□□□ -0.56
SHMT2-226ENST00000556825 CR1LQ2VPA4 569 aa11.52□□□□□ -0.56
SHMT2-226ENST00000556825 RASL11AQ6T310 242 aa11.52□□□□□ -0.56
SHMT2-226ENST00000556825 Q6ZNB5 142 aa11.52□□□□□ -0.56
SHMT2-226ENST00000556825 WIPF2Q8TF74 440 aaPredicted RBP11.52□□□□□ -0.56
SHMT2-226ENST00000556825 ARPC1AQ92747 370 aa11.52□□□□□ -0.56
SHMT2-226ENST00000556825 KCNS2Q9ULS6 477 aa11.52□□□□□ -0.56
SHMT2-226ENST00000556825 MPDZO75970 2070 aa11.52□□□□□ -0.57
SHMT2-226ENST00000556825 PIGBOS1A0A0B4J2F0 54 aa11.52□□□□□ -0.57
SHMT2-226ENST00000556825 H0Y980 276 aa11.52□□□□□ -0.57
SHMT2-226ENST00000556825 RPS15AP62244 130 aaKnown RBP11.52□□□□□ -0.57
SHMT2-226ENST00000556825 DMRTC1Q5HYR2 192 aa11.52□□□□□ -0.57
SHMT2-226ENST00000556825 SPANXN5Q5MJ07 72 aa11.52□□□□□ -0.57
SHMT2-226ENST00000556825 TEPPQ6URK8 271 aa11.52□□□□□ -0.57
SHMT2-226ENST00000556825 ZNF818PQ6ZRF7 136 aa11.52□□□□□ -0.57
SHMT2-226ENST00000556825 SPEM1Q8N4L4 309 aa11.52□□□□□ -0.57
SHMT2-226ENST00000556825 SYT8Q8NBV8 401 aa11.52□□□□□ -0.57
SHMT2-226ENST00000556825 OR4X2Q8NGF9 303 aa11.52□□□□□ -0.57
SHMT2-226ENST00000556825 OR4C3Q8NH37 302 aa11.52□□□□□ -0.57
SHMT2-226ENST00000556825 ZNF502Q8TBZ5 544 aa11.52□□□□□ -0.57
SHMT2-226ENST00000556825 GTSF1Q8WW33 167 aa11.52□□□□□ -0.57
SHMT2-226ENST00000556825 URB1-AS1Q96HZ7 61 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms