RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 PIEZO2Q9H5I5 2752 aa12.05□□□□□ -0.48
ACTN1-211ENST00000553882 A0A1W2PPV4 95 aa12.05□□□□□ -0.48
ACTN1-211ENST00000553882 AHRRA9YTQ3 701 aa12.05□□□□□ -0.48
ACTN1-211ENST00000553882 ERVK-16P61578 105 aa12.05□□□□□ -0.48
ACTN1-211ENST00000553882 PIP4P1Q86T03 277 aa12.05□□□□□ -0.48
ACTN1-211ENST00000553882 S1PR3Q99500 378 aa12.05□□□□□ -0.48
ACTN1-211ENST00000553882 TUBG2Q9NRH3 451 aa12.05□□□□□ -0.48
ACTN1-211ENST00000553882 TMEM140Q9NV12 185 aa12.05□□□□□ -0.48
ACTN1-211ENST00000553882 PGPEP1LA6NFU8 196 aa12.04□□□□□ -0.48
ACTN1-211ENST00000553882 CHRNA7P36544 502 aa12.04□□□□□ -0.48
ACTN1-211ENST00000553882 TREML4Q6UXN2 200 aa12.04□□□□□ -0.48
ACTN1-211ENST00000553882 ITLN1Q8WWA0 313 aa12.04□□□□□ -0.48
ACTN1-211ENST00000553882 YLPM1P49750 1951 aaKnown RBP12.04□□□□□ -0.48
ACTN1-211ENST00000553882 ZNF292O60281 2723 aa12.04□□□□□ -0.48
ACTN1-211ENST00000553882 PCNX1Q96RV3 2341 aa12.04□□□□□ -0.48
ACTN1-211ENST00000553882 ELOA3CA0A087WX78 387 aaPredicted RBP12.04□□□□□ -0.48
ACTN1-211ENST00000553882 PPP5D1E7EU14 171 aa12.04□□□□□ -0.48
ACTN1-211ENST00000553882 YPEL1O60688 119 aa12.04□□□□□ -0.48
ACTN1-211ENST00000553882 SPCS3P61009 180 aa12.04□□□□□ -0.48
ACTN1-211ENST00000553882 MZT1Q08AG7 82 aa12.04□□□□□ -0.48
ACTN1-211ENST00000553882 MIC13Q5XKP0 118 aa12.04□□□□□ -0.48
ACTN1-211ENST00000553882 ZNF474Q6S9Z5 364 aaPredicted RBP12.04□□□□□ -0.48
ACTN1-211ENST00000553882 DEFB108BQ8NET1 73 aa12.04□□□□□ -0.48
ACTN1-211ENST00000553882 SSMEM1Q8WWF3 244 aa12.04□□□□□ -0.48
ACTN1-211ENST00000553882 YPEL2Q96QA6 119 aa12.04□□□□□ -0.48
ACTN1-211ENST00000553882 MS4A5Q9H3V2 200 aa12.04□□□□□ -0.48
ACTN1-211ENST00000553882 CALYQ9NYX4 217 aa12.04□□□□□ -0.48
ACTN1-211ENST00000553882 DMRT1Q9Y5R6 373 aa12.04□□□□□ -0.48
ACTN1-211ENST00000553882 SOX15O60248 233 aa12.03□□□□□ -0.48
ACTN1-211ENST00000553882 PPP1R35Q8TAP8 253 aa12.03□□□□□ -0.48
ACTN1-211ENST00000553882 TMEM170AQ8WVE7 144 aa12.03□□□□□ -0.48
ACTN1-211ENST00000553882 PACRGQ96M98 296 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-211ENST00000553882 SRD5A3Q9H8P0 318 aa12.03□□□□□ -0.48
ACTN1-211ENST00000553882 ANKRD11Q6UB99 2663 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-211ENST00000553882 ZFHX2Q9C0A1 2572 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-211ENST00000553882 GFRA3O60609 400 aa12.03□□□□□ -0.48
ACTN1-211ENST00000553882 NDUFB4O95168 129 aa12.03□□□□□ -0.48
ACTN1-211ENST00000553882 KLF3P57682 345 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-211ENST00000553882 RELBQ01201 579 aa12.03□□□□□ -0.48
ACTN1-211ENST00000553882 PAX5Q02548 391 aa12.03□□□□□ -0.48
ACTN1-211ENST00000553882 PDLIM3Q53GG5 364 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-211ENST00000553882 PFDN5Q99471 154 aa12.03□□□□□ -0.48
ACTN1-211ENST00000553882 MGST2Q99735 147 aa12.03□□□□□ -0.48
ACTN1-211ENST00000553882 HIST1H2BLQ99880 126 aa12.03□□□□□ -0.48
ACTN1-211ENST00000553882 A0A1B0GWJ7 208 aa12.02□□□□□ -0.49
ACTN1-211ENST00000553882 HRASP01112 189 aa12.02□□□□□ -0.49
ACTN1-211ENST00000553882 ARL14EPLP0DKL9 152 aa12.02□□□□□ -0.49
ACTN1-211ENST00000553882 GNB1P62873 340 aa12.02□□□□□ -0.49
ACTN1-211ENST00000553882 TGOLN2O43493 480 aa12.02□□□□□ -0.49
ACTN1-211ENST00000553882 MYOD1P15172 320 aa12.02□□□□□ -0.49
ACTN1-211ENST00000553882 VDAC2P45880 294 aaPredicted RBP12.02□□□□□ -0.49
ACTN1-211ENST00000553882 FAM3BP58499 235 aaPredicted RBP12.02□□□□□ -0.49
ACTN1-211ENST00000553882 RHOVQ96L33 236 aa12.02□□□□□ -0.49
ACTN1-211ENST00000553882 HINT2Q9BX68 163 aa12.02□□□□□ -0.49
ACTN1-211ENST00000553882 GFOD1Q9NXC2 390 aa12.02□□□□□ -0.49
ACTN1-211ENST00000553882 PITPNC1Q9UKF7 332 aa12.02□□□□□ -0.49
ACTN1-211ENST00000553882 TCF19Q9Y242 345 aa12.02□□□□□ -0.49
ACTN1-211ENST00000553882 PXMP4Q9Y6I8 212 aa12.02□□□□□ -0.49
ACTN1-211ENST00000553882 SAA2-SAA4A0A096LPE2 208 aa12.01□□□□□ -0.49
ACTN1-211ENST00000553882 SAA2P0DJI9 122 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-211ENST00000553882 GNG10P50151 68 aa12.01□□□□□ -0.49
ACTN1-211ENST00000553882 GAMTQ14353 236 aa12.01□□□□□ -0.49
ACTN1-211ENST00000553882 PRSS8Q16651 343 aa12.01□□□□□ -0.49
ACTN1-211ENST00000553882 CT45A1Q5HYN5 189 aa12.01□□□□□ -0.49
ACTN1-211ENST00000553882 CT45A3Q8NHU0 189 aa12.01□□□□□ -0.49
ACTN1-211ENST00000553882 DIRC2Q96SL1 478 aa12.01□□□□□ -0.49
ACTN1-211ENST00000553882 GGTLC1Q9BX51 225 aa12.01□□□□□ -0.49
ACTN1-211ENST00000553882 PKDREJQ9NTG1 2253 aa12.01□□□□□ -0.49
ACTN1-211ENST00000553882 MBD3L4A6NDZ8 208 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-211ENST00000553882 MBD3L3A6NE82 208 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-211ENST00000553882 MBD3L5A6NJ08 208 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-211ENST00000553882 F2RL2O00254 374 aa12.01□□□□□ -0.49
ACTN1-211ENST00000553882 RPP30P78346 268 aaKnown RBP12.01□□□□□ -0.49
ACTN1-211ENST00000553882 C22orf34Q6ZV56 151 aa12.01□□□□□ -0.49
ACTN1-211ENST00000553882 LYG1Q8N1E2 194 aa12.01□□□□□ -0.49
ACTN1-211ENST00000553882 ZNF114Q8NC26 417 aa12.01□□□□□ -0.49
ACTN1-211ENST00000553882 MBD3L2Q8NHZ7 208 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-211ENST00000553882 TMEM37Q8WXS4 190 aa12.01□□□□□ -0.49
ACTN1-211ENST00000553882 PYGO2Q9BRQ0 406 aa12.01□□□□□ -0.49
ACTN1-211ENST00000553882 PRDM13Q9H4Q3 707 aa12.01□□□□□ -0.49
ACTN1-211ENST00000553882 FUT9Q9Y231 359 aa12.01□□□□□ -0.49
ACTN1-211ENST00000553882 HNF1AP20823 631 aa12□□□□□ -0.49
ACTN1-211ENST00000553882 C17orf58Q2M2W7 97 aa12□□□□□ -0.49
ACTN1-211ENST00000553882 AARDQ4LEZ3 155 aa12□□□□□ -0.49
ACTN1-211ENST00000553882 ANKRD39Q53RE8 183 aa12□□□□□ -0.49
ACTN1-211ENST00000553882 LINC01551Q86U37 167 aa12□□□□□ -0.49
ACTN1-211ENST00000553882 TGIF2LYQ8IUE0 185 aa12□□□□□ -0.49
ACTN1-211ENST00000553882 ZADH2Q8N4Q0 377 aa12□□□□□ -0.49
ACTN1-211ENST00000553882 ZNRD1Q9P1U0 126 aa12□□□□□ -0.49
ACTN1-211ENST00000553882 FAM215AQ9Y5M1 114 aa12□□□□□ -0.49
ACTN1-211ENST00000553882 DSCAML1Q8TD84 2053 aa12□□□□□ -0.49
ACTN1-211ENST00000553882 ACACAQ13085 2346 aa12□□□□□ -0.49
ACTN1-211ENST00000553882 ARFGEF3Q5TH69 2177 aa12□□□□□ -0.49
ACTN1-211ENST00000553882 XKRY2A2RUG3 117 aa12□□□□□ -0.49
ACTN1-211ENST00000553882 PRSS46E5RG02 174 aa12□□□□□ -0.49
ACTN1-211ENST00000553882 LY86O95711 162 aa12□□□□□ -0.49
ACTN1-211ENST00000553882 C1QTNF9P0C862 333 aa12□□□□□ -0.49
ACTN1-211ENST00000553882 OR2T10Q8NGZ9 312 aa12□□□□□ -0.49
ACTN1-211ENST00000553882 OR4S2Q8NH73 311 aa12□□□□□ -0.49
ACTN1-211ENST00000553882 SNRNP40Q96DI7 357 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms