RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 SRRQ9GZT4 340 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 TOLLIPQ9H0E2 274 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 ARV1Q9H2C2 271 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 PLEKHA1Q9HB21 404 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 EXOSC4Q9NPD3 245 aaKnown RBP2.62□□□□□ -1.99
LIMA1-208ENST00000551691 ACOT13Q9NPJ3 140 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 RHBDL2Q9NX52 303 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 DNAJC27Q9NZQ0 273 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 SLC7A11Q9UPY5 501 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 HDGFL3Q9Y3E1 203 aa2.62□□□□□ -1.99
LIMA1-208ENST00000551691 V9GYY5 206 aaPredicted RBP2.62□□□□□ -1.99
LIMA1-208ENST00000551691 VPS13BQ7Z7G8 4022 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 SMIM26A0A096LP01 95 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 TMED7-TICAM2A0A0A6YYA0 188 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 A0A1B0GTI1 187 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 CLDN24A6NM45 220 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 EIF1BO60739 113 aaKnown RBP2.61□□□□□ -1.99
LIMA1-208ENST00000551691 CRTAPO75718 401 aaPredicted RBP2.61□□□□□ -1.99
LIMA1-208ENST00000551691 WISP3O95389 354 aaPredicted RBP2.61□□□□□ -1.99
LIMA1-208ENST00000551691 RAB36O95755 333 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 MMP7P09237 267 aaPredicted RBP2.61□□□□□ -1.99
LIMA1-208ENST00000551691 APLNRP35414 380 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 IDH2P48735 452 aaKnown RBP2.61□□□□□ -1.99
LIMA1-208ENST00000551691 PSG7Q13046 419 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 SKP2Q13309 424 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 OR1Q1Q15612 314 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 MAPK14Q16539 360 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 BSXQ3C1V8 233 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 ZNF404Q494X3 552 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 C5orf47Q569G3 176 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 ACTL10Q5JWF8 245 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 OTPQ5XKR4 325 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 PLEKHG7Q6ZR37 379 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 MTERF4Q7Z6M4 381 aaKnown RBP2.61□□□□□ -1.99
LIMA1-208ENST00000551691 SLC7A5P1Q8MH63 180 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 DYNAPQ8N1N2 210 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 C10orf111Q8N326 155 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 CDRT4Q8N9R6 151 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 CYB561A3Q8NBI2 242 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 NECAP1Q8NC96 275 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 ZNF563Q8TA94 476 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 KLF14Q8TD94 323 aaPredicted RBP2.61□□□□□ -1.99
LIMA1-208ENST00000551691 TNFRSF14Q92956 283 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 CHMP6Q96FZ7 201 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 OR2V2Q96R30 315 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 SULT4A1Q9BR01 284 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 ZNF251Q9BRH9 671 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 LINC00470Q9BZP3 86 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 DERL2Q9GZP9 239 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 SLC38A1Q9H2H9 487 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 ACOT9Q9Y305 439 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 ORC6Q9Y5N6 252 aa2.61□□□□□ -1.99
LIMA1-208ENST00000551691 FLG2Q5D862 2391 aaPredicted RBP2.6□□□□□ -1.99
LIMA1-208ENST00000551691 IGLV11-55A0A075B6I3 123 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 A0A0B4J2E0 115 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 IGKV3D-20A0A0C4DH25 116 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 GNG14A0A1W2PPG7 69 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 H3BSH0 61 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 SNAI2O43623 268 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 SLC22A5O76082 557 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 IGLV1-47P01700 117 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 INAFM2P0DMQ5 153 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 GALR1P47211 349 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 UBE2E1P51965 193 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 PLTPP55058 493 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 PRR3P79522 188 aaKnown RBP2.6□□□□□ -1.99
LIMA1-208ENST00000551691 TRAM1Q15629 374 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 MOGQ16653 247 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 DEFB136Q30KP8 78 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 CDNFQ49AH0 187 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 CDKL4Q5MAI5 379 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 SYT6Q5T7P8 510 aaPredicted RBP2.6□□□□□ -1.99
LIMA1-208ENST00000551691 HCP5Q6MZN7 132 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 CALHM1Q8IU99 346 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 STPG2Q8N412 459 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 ZNF645Q8N7E2 425 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 RXFP4Q8TDU9 374 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 PHYHIPLQ96FC7 376 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 UBE2E2Q96LR5 201 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 CAMK2N2Q96S95 79 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 ZNF382Q96SR6 550 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 APOL4Q9BPW4 351 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 SAV1Q9H4B6 383 aaPredicted RBP2.6□□□□□ -1.99
LIMA1-208ENST00000551691 ABCB9Q9NP78 766 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 IFT46Q9NQC8 304 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 TMEM100Q9NV29 134 aa2.6□□□□□ -1.99
LIMA1-208ENST00000551691 OBSCNQ5VST9 7968 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 TNCP24821 2201 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 A0A0A6YYH2 397 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 IGHV3-66A0A0C4DH42 116 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 A0A0J9YXV3 536 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 A0A1W2PRG6 482 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 A6NJ64 397 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 ZNF705GA8MUZ8 300 aaPredicted RBP2.59□□□□□ -1.99
LIMA1-208ENST00000551691 NDUFC2-KCTD14E9PQ53 114 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 TNFRSF11BO00300 401 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 PHYHO14832 338 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 UBDO15205 165 aa2.59□□□□□ -1.99
LIMA1-208ENST00000551691 NDUFS6O75380 124 aaKnown RBP2.59□□□□□ -1.99
LIMA1-208ENST00000551691 ZNF189O75820 626 aaPredicted RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms