RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 EP300Q09472 2414 aaPredicted RBP11.38□□□□□ -0.59
VPS33A-208ENST00000543633 TRBV20OR9-2A0A075B6H5 130 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 A0A1W2PNU3 283 aaPredicted RBP11.38□□□□□ -0.59
VPS33A-208ENST00000543633 GFRA3O60609 400 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 FCGR3BO75015 233 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 DEFA4P12838 97 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 HOXC12P31275 282 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 PLA2G5P39877 138 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 TPPP2P59282 170 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 RHOBP62745 196 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 SPINK9Q5DT21 86 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 GCSAMLQ5JQS6 135 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 FAM53AQ6NSI3 398 aaPredicted RBP11.38□□□□□ -0.59
VPS33A-208ENST00000543633 FAM214BQ7L5A3 538 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 ZNF114Q8NC26 417 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 CMTM2Q8TAZ6 248 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 MS4A10Q96PG2 267 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 DEFB127Q9H1M4 99 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 MS4A5Q9H3V2 200 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 NCOR1P1Q9H4R4 102 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 NPVFQ9HCQ7 196 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 RAB9BQ9NP90 201 aa11.38□□□□□ -0.59
VPS33A-208ENST00000543633 POLR3KQ9Y2Y1 108 aaPredicted RBP11.38□□□□□ -0.59
VPS33A-208ENST00000543633 M0QZK8 103 aa11.37□□□□□ -0.59
VPS33A-208ENST00000543633 F2RL2O00254 374 aa11.37□□□□□ -0.59
VPS33A-208ENST00000543633 TIMM8AO60220 97 aaPredicted RBP11.37□□□□□ -0.59
VPS33A-208ENST00000543633 SNRPCP09234 159 aaKnown RBP11.37□□□□□ -0.59
VPS33A-208ENST00000543633 GCHFRP30047 84 aa11.37□□□□□ -0.59
VPS33A-208ENST00000543633 ADMP35318 185 aa11.37□□□□□ -0.59
VPS33A-208ENST00000543633 NBL1P41271 181 aa11.37□□□□□ -0.59
VPS33A-208ENST00000543633 RPS16P62249 146 aaKnown RBP11.37□□□□□ -0.59
VPS33A-208ENST00000543633 RELBQ01201 579 aa11.37□□□□□ -0.59
VPS33A-208ENST00000543633 MBNL2Q5VZF2 373 aaKnown RBP11.37□□□□□ -0.59
VPS33A-208ENST00000543633 VASH2Q86V25 355 aa11.37□□□□□ -0.59
VPS33A-208ENST00000543633 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.37□□□□□ -0.59
VPS33A-208ENST00000543633 ZCCHC14Q8WYQ9 949 aaKnown RBP11.37□□□□□ -0.59
VPS33A-208ENST00000543633 UHRF2Q96PU4 802 aa11.37□□□□□ -0.59
VPS33A-208ENST00000543633 DNAJC13O75165 2243 aa11.37□□□□□ -0.59
VPS33A-208ENST00000543633 TRGV10A0A0A0MS01 117 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 IGHV3-43A0A0B4J1X8 118 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 SCO2A0A1W2PP80 73 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 A8MXE2 369 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 M0R143 59 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 EREGO14944 169 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 TCAPO15273 167 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 LYZL6O75951 148 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 SCGB1D1O95968 90 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 IGHV3-43DP0DP04 118 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 EGR1P18146 543 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 RANP62826 216 aaKnown RBP11.36□□□□□ -0.59
VPS33A-208ENST00000543633 RPL19P84098 196 aaKnown RBP11.36□□□□□ -0.59
VPS33A-208ENST00000543633 RAB31Q13636 194 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 COX19Q49B96 90 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 MORN2Q502X0 79 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 TGIF2LXQ8IUE1 241 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 OR4S2Q8NH73 311 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 CORO2AQ92828 525 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 PATZ1Q9HBE1 687 aaKnown RBP11.36□□□□□ -0.59
VPS33A-208ENST00000543633 FREM2Q5SZK8 3169 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 ZNF292O60281 2723 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 MGST3O14880 152 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 PROP1O75360 226 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 IGHG3P01860 377 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 GCH1P30793 250 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 CFHR2P36980 270 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 RPL29P47914 159 aaKnown RBP11.36□□□□□ -0.59
VPS33A-208ENST00000543633 PRSS8Q16651 343 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 CXorf67Q86X51 503 aaPredicted RBP11.36□□□□□ -0.59
VPS33A-208ENST00000543633 Q8TCH9 128 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 S1PR3Q99500 378 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 C20orf144Q9BQM9 153 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 OPN3Q9H1Y3 402 aaPredicted RBP11.36□□□□□ -0.59
VPS33A-208ENST00000543633 SLC25A10Q9UBX3 287 aaPredicted RBP11.36□□□□□ -0.59
VPS33A-208ENST00000543633 METRNQ9UJH8 293 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 TCF19Q9Y242 345 aa11.36□□□□□ -0.59
VPS33A-208ENST00000543633 IGHV3-64DA0A0J9YX35 117 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 C15orf61A6NNL5 157 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 M0R1X1 148 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 RRHO14718 337 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 IL6RP08887 468 aaPredicted RBP11.35□□□□□ -0.59
VPS33A-208ENST00000543633 RAB4AP20338 218 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 PRDX2P32119 198 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 RAB7AP51149 207 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 ZNF124Q15973 351 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 MIC13Q5XKP0 118 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 TEPPQ6URK8 271 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 DHRS13Q6UX07 377 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 TEX43Q6ZNM6 134 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 TMEM256Q8N2U0 113 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 CD177Q8N6Q3 437 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 OCC1Q8TAD7 63 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 DDB2Q92466 427 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 SNHG12Q9BXW3 62 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 TMEM106BQ9NUM4 274 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 TMEM140Q9NV12 185 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 GNG12Q9UBI6 72 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 FOXA2Q9Y261 457 aaPredicted RBP11.35□□□□□ -0.59
VPS33A-208ENST00000543633 SRRM5B3KS81 715 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 IGLV1-44P01699 117 aa11.35□□□□□ -0.59
VPS33A-208ENST00000543633 OR10J4P0C629 311 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms