RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 PAX9P55771 341 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 FXYD7P58549 80 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 DSTNP60981 165 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 RPL19P84098 196 aaKnown RBP1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 RELQ04864 619 aaPredicted RBP1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 RIPK1Q13546 671 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 IRF3Q14653 427 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 ATXN7L3Q14CW9 347 aaPredicted RBP1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 RSU1Q15404 277 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 RFTN2Q52LD8 501 aaPredicted RBP1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 ASRGL1Q7L266 308 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 CMC1Q7Z7K0 106 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 CENPLQ8N0S6 344 aaPredicted RBP1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 FAM58AQ8N1B3 248 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 TMEM75Q8N9X5 138 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 CCDC63Q8NA47 563 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 THAP8Q8NA92 274 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 CHST4Q8NCG5 386 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 OR2AK2Q8NG84 335 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 OR52E5Q8NH55 327 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 LYPD6BQ8NI32 183 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 TMEM170AQ8WVE7 144 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 CDKL2Q92772 493 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 SLC25A38Q96DW6 304 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 RMI2Q96E14 147 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 MRPS24Q96EL2 167 aaKnown RBP1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 NRBF2Q96F24 287 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 SLC35E1Q96K37 410 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 KCNA7Q96RP8 456 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 EBF4Q9BQW3 602 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 SLC35A5Q9BS91 424 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 NMNAT1Q9HAN9 279 aaPredicted RBP1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 MEPEQ9NQ76 525 aaPredicted RBP1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 PRR34Q9NV39 138 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 MRPL22Q9NWU5 206 aaKnown RBP1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 MTCH1Q9NZJ7 389 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 KIF25Q9UIL4 384 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 ZNF257Q9Y2Q1 563 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 WASHC3Q9Y3C0 194 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 CCL27Q9Y4X3 112 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 ATP6V1DQ9Y5K8 247 aa1.19□□□□□ -2.22
TRAV1-1-201ENST00000542354 IGHV3-43A0A0B4J1X8 118 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 LOC107986453A0A1B0GWG9 222 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 PQLC2LA1A4F0 135 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 A6NN06 94 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 NPIPB5A8MRT5 1133 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 FOXI3A8MTJ6 420 aaPredicted RBP1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 KLLNB2CW77 178 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 DEGS1O15121 323 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 ARPC2O15144 300 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 NUPL2O15504 423 aaKnown RBP1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 ENTPD6O75354 484 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 BANF1O75531 89 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 CCNB2O95067 398 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 CYB5AP00167 134 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 IFNA7P01567 189 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 PRM2P04554 102 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 MT1FP04733 61 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 C2P06681 752 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 GSTA2P09210 222 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 IGHV3-43DP0DP04 118 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 GATA1P15976 413 aaPredicted RBP1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 HIST1H1BP16401 226 aaKnown RBP1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 PRKACAP17612 351 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 CRHBPP24387 322 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 GCAP28676 217 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 HSD11B1P28845 292 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 PPP1CCP36873 323 aaKnown RBP1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 ETV6P41212 452 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 CX3CR1P49238 355 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 SNU13P55769 128 aaKnown RBP1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 RPL38P63173 70 aaKnown RBP1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 MAPK11Q15759 364 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 MESTQ5EB52 335 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 PSMG4Q5JS54 123 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 C6orf183Q5T699 404 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 ANXA8L1Q5VT79 327 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 DHRS4L2Q6PKH6 230 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 ZNF600Q6ZNG1 722 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 TRIML2Q8N7C3 387 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 NAT8LQ8N9F0 302 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 NEXN-AS1Q8NBZ9 246 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 STXBP6Q8NFX7 210 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 OR10H4Q8NGA5 316 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 OR51T1Q8NGJ9 327 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 OR13F1Q8NGS4 319 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 OR5H2Q8NGV7 314 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 VSTM2AQ8TAG5 236 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 SPACA4Q8TDM5 124 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 UBLCP1Q8WVY7 318 aaPredicted RBP1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 ARL11Q969Q4 196 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 SLAMF9Q96A28 289 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 DGCR14Q96DF8 476 aaKnown RBP1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 CMTM5Q96DZ9 223 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 MS4A14Q96JA4 679 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 IGF2BP2-AS1Q96M15 143 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 Q96M85 177 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 CCDC42Q96M95 316 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 ZNF570Q96NI8 536 aa1.18□□□□□ -2.22
TRAV1-1-201ENST00000542354 ABHD1Q96SE0 405 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms