RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 DPRXA6NFQ7 191 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 TSTD3H0UI37 97 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 HRASP01112 189 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 OR3A1P47881 315 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 PDLIM4P50479 330 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 SMIM21Q3B7S5 101 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 COQ2Q96H96 371 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 RNF224P0DH78 156 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 AESQ08117 197 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 VWC2Q2TAL6 325 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 SPINK9Q5DT21 86 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 TMEM108Q6UXF1 575 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 VKORC1Q9BQB6 163 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 A0A1W2PPQ1 181 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 RNF212BA8MTL3 300 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 SRRM5B3KS81 715 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 PAGE4O60829 102 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 ACTL10Q5JWF8 245 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 BTNL3Q6UXE8 466 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 ZNF66Q6ZN08 573 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 DMRTC2Q8IXT2 367 aaPredicted RBP14.2□□□□□ -0.14
SPIDR-227ENST00000541342 ZNF664Q8N3J9 261 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 GCSAMQ8N6F7 178 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 NUP37Q8NFH4 326 aa14.2□□□□□ -0.14
SPIDR-227ENST00000541342 ATRXP46100 2492 aa14.19□□□□□ -0.14
SPIDR-227ENST00000541342 PPP5D1E7EU14 171 aa14.19□□□□□ -0.14
SPIDR-227ENST00000541342 GYPAP02724 150 aa14.19□□□□□ -0.14
SPIDR-227ENST00000541342 MOGAT3Q86VF5 341 aa14.19□□□□□ -0.14
SPIDR-227ENST00000541342 TMEM170AQ8WVE7 144 aa14.19□□□□□ -0.14
SPIDR-227ENST00000541342 ITLN1Q8WWA0 313 aa14.19□□□□□ -0.14
SPIDR-227ENST00000541342 ACTR3CQ9C0K3 210 aaPredicted RBP14.19□□□□□ -0.14
SPIDR-227ENST00000541342 MANBALQ9NQG1 85 aa14.19□□□□□ -0.14
SPIDR-227ENST00000541342 NCOR2Q9Y618 2525 aa14.19□□□□□ -0.14
SPIDR-227ENST00000541342 TRGV8A0A0C4DH27 118 aa14.19□□□□□ -0.14
SPIDR-227ENST00000541342 GNB2P62879 340 aa14.19□□□□□ -0.14
SPIDR-227ENST00000541342 BSPH1Q075Z2 132 aa14.19□□□□□ -0.14
SPIDR-227ENST00000541342 DTD1Q8TEA8 209 aa14.19□□□□□ -0.14
SPIDR-227ENST00000541342 HCFC1P51610 2035 aa14.19□□□□□ -0.14
SPIDR-227ENST00000541342 ITPR1Q14643 2758 aa14.19□□□□□ -0.14
SPIDR-227ENST00000541342 GGCTO75223 188 aaKnown RBP14.18□□□□□ -0.14
SPIDR-227ENST00000541342 IFNA10P01566 189 aa14.18□□□□□ -0.14
SPIDR-227ENST00000541342 KLRB1Q12918 225 aa14.18□□□□□ -0.14
SPIDR-227ENST00000541342 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.18□□□□□ -0.14
SPIDR-227ENST00000541342 TMEM30CPA0ZSE6 113 aa14.18□□□□□ -0.14
SPIDR-227ENST00000541342 A8MWP6 167 aa14.18□□□□□ -0.14
SPIDR-227ENST00000541342 IFNL4K9M1U5 179 aa14.18□□□□□ -0.14
SPIDR-227ENST00000541342 FAM3BP58499 235 aaPredicted RBP14.18□□□□□ -0.14
SPIDR-227ENST00000541342 ATP6V1FQ16864 119 aa14.18□□□□□ -0.14
SPIDR-227ENST00000541342 SLC35E4Q6ICL7 350 aa14.18□□□□□ -0.14
SPIDR-227ENST00000541342 SSX9Q7RTT3 188 aa14.18□□□□□ -0.14
SPIDR-227ENST00000541342 FUT9Q9Y231 359 aa14.18□□□□□ -0.14
SPIDR-227ENST00000541342 IGKV1D-17A0A075B6S4 117 aa14.18□□□□□ -0.14
SPIDR-227ENST00000541342 LINC00473A8K010 186 aa14.18□□□□□ -0.14
SPIDR-227ENST00000541342 CFHR2P36980 270 aa14.18□□□□□ -0.14
SPIDR-227ENST00000541342 GCSAMLQ5JQS6 135 aa14.18□□□□□ -0.14
SPIDR-227ENST00000541342 GALMQ96C23 342 aa14.18□□□□□ -0.14
SPIDR-227ENST00000541342 WFIKKN1Q96NZ8 548 aa14.18□□□□□ -0.14
SPIDR-227ENST00000541342 SPTA1P02549 2419 aa14.17□□□□□ -0.14
SPIDR-227ENST00000541342 POLEQ07864 2286 aa14.17□□□□□ -0.14
SPIDR-227ENST00000541342 IGHV3OR15-7A0A075B7D8 119 aa14.17□□□□□ -0.14
SPIDR-227ENST00000541342 IGHV1-46P01743 117 aa14.17□□□□□ -0.14
SPIDR-227ENST00000541342 HBZP02008 142 aa14.17□□□□□ -0.14
SPIDR-227ENST00000541342 MSMO1Q15800 293 aa14.17□□□□□ -0.14
SPIDR-227ENST00000541342 TPRX1Q8N7U7 411 aa14.17□□□□□ -0.14
SPIDR-227ENST00000541342 OR10P1Q8NGE3 313 aa14.17□□□□□ -0.14
SPIDR-227ENST00000541342 OR5B12Q96R08 314 aa14.17□□□□□ -0.14
SPIDR-227ENST00000541342 LHBP01229 141 aa14.17□□□□□ -0.14
SPIDR-227ENST00000541342 MBP02144 154 aa14.17□□□□□ -0.14
SPIDR-227ENST00000541342 PRDX2P32119 198 aa14.17□□□□□ -0.14
SPIDR-227ENST00000541342 ZBTB34Q8NCN2 500 aa14.17□□□□□ -0.14
SPIDR-227ENST00000541342 TMEM37Q8WXS4 190 aa14.17□□□□□ -0.14
SPIDR-227ENST00000541342 TYMSP04818 313 aa14.17□□□□□ -0.14
SPIDR-227ENST00000541342 CLDN14O95500 239 aa14.16□□□□□ -0.14
SPIDR-227ENST00000541342 NEIL1Q96FI4 390 aaPredicted RBP14.16□□□□□ -0.14
SPIDR-227ENST00000541342 DERL1Q9BUN8 251 aa14.16□□□□□ -0.14
SPIDR-227ENST00000541342 OR6C3Q9NZP0 311 aa14.16□□□□□ -0.14
SPIDR-227ENST00000541342 TET2Q6N021 2002 aaPredicted RBP14.16□□□□□ -0.14
SPIDR-227ENST00000541342 NDUFB7P17568 137 aa14.16□□□□□ -0.14
SPIDR-227ENST00000541342 GABRA2P47869 451 aa14.16□□□□□ -0.14
SPIDR-227ENST00000541342 OR2T10Q8NGZ9 312 aa14.16□□□□□ -0.14
SPIDR-227ENST00000541342 ANAPC16Q96DE5 110 aa14.16□□□□□ -0.14
SPIDR-227ENST00000541342 ACY3Q96HD9 319 aa14.16□□□□□ -0.14
SPIDR-227ENST00000541342 C15orf62A8K5M9 175 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 C11orf94C9JXX5 98 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 GATA4P43694 442 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 SELENOVP59797 346 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 FAM201AQ5SY85 155 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 MISP3Q96FF7 219 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 GCM1Q9NP62 436 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 AURKAIP1Q9NWT8 199 aaPredicted RBP14.15□□□□□ -0.14
SPIDR-227ENST00000541342 DSCAMO60469 2012 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 VENTXO95231 258 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 SNRPCP09234 159 aaKnown RBP14.15□□□□□ -0.14
SPIDR-227ENST00000541342 SSTR5P35346 364 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 CA7P43166 264 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 ADIPOQQ15848 244 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 SSX2Q16385 188 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 LINC01551Q86U37 167 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 MRGPRDQ8TDS7 321 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 DIRC2Q96SL1 478 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms