RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, humanhuman

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-205ENST00000538828 RFX2P48378 723 aa9.51□□□□□ -0.89
CLTCL1-205ENST00000538828 DGCR2P98153 550 aa9.51□□□□□ -0.89
CLTCL1-205ENST00000538828 THOC7Q6I9Y2 204 aaKnown RBP9.51□□□□□ -0.89
CLTCL1-205ENST00000538828 ZNF343Q6P1L6 599 aa9.51□□□□□ -0.89
CLTCL1-205ENST00000538828 ZNF818PQ6ZRF7 136 aa9.51□□□□□ -0.89
CLTCL1-205ENST00000538828 FAM223AQ8IWN6 122 aa9.51□□□□□ -0.89
CLTCL1-205ENST00000538828 SPAG16Q8N0X2 631 aa9.51□□□□□ -0.89
CLTCL1-205ENST00000538828 MRAPQ8TCY5 172 aa9.51□□□□□ -0.89
CLTCL1-205ENST00000538828 DUX3Q96PT4 197 aa9.51□□□□□ -0.89
CLTCL1-205ENST00000538828 ZNF2Q9BSG1 426 aaPredicted RBP9.51□□□□□ -0.89
CLTCL1-205ENST00000538828 ZNF257Q9Y2Q1 563 aa9.51□□□□□ -0.89
CLTCL1-205ENST00000538828 C13orf42A0A1B0GVH6 325 aa9.5□□□□□ -0.89
CLTCL1-205ENST00000538828 NPIPB5A8MRT5 1133 aa9.5□□□□□ -0.89
CLTCL1-205ENST00000538828 SEC14L6B5MCN3 397 aa9.5□□□□□ -0.89
CLTCL1-205ENST00000538828 GPR31O00270 319 aa9.5□□□□□ -0.89
CLTCL1-205ENST00000538828 OVOL1O14753 267 aa9.5□□□□□ -0.89
CLTCL1-205ENST00000538828 ZNF735P0CB33 412 aa9.5□□□□□ -0.89
CLTCL1-205ENST00000538828 F2RP25116 425 aa9.5□□□□□ -0.89
CLTCL1-205ENST00000538828 HRH1P35367 487 aa9.5□□□□□ -0.89
CLTCL1-205ENST00000538828 RPL8P62917 257 aaKnown RBP9.5□□□□□ -0.89
CLTCL1-205ENST00000538828 IDO2Q6ZQW0 420 aa9.5□□□□□ -0.89
CLTCL1-205ENST00000538828 ARRDC1Q8N5I2 433 aa9.5□□□□□ -0.89
CLTCL1-205ENST00000538828 OR5T1Q8NG75 326 aa9.5□□□□□ -0.89
CLTCL1-205ENST00000538828 PHB2Q99623 299 aa9.5□□□□□ -0.89
CLTCL1-205ENST00000538828 SLC2A9Q9NRM0 540 aa9.5□□□□□ -0.89
CLTCL1-205ENST00000538828 CCDC59Q9P031 241 aaKnown RBP9.5□□□□□ -0.89
CLTCL1-205ENST00000538828 MTFP1Q9UDX5 166 aa9.5□□□□□ -0.89
CLTCL1-205ENST00000538828 SCOCQ9UIL1 159 aa9.5□□□□□ -0.89
CLTCL1-205ENST00000538828 MEIS3P1A6NDR6 274 aa9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 FAM25AB3EWG3 89 aa9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 FAM25CB3EWG5 89 aa9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 FAM25GB3EWG6 89 aa9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 PGLYRP1O75594 196 aaPredicted RBP9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 DHFRP00374 187 aa9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 PMP2P02689 132 aa9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 CRYGCP07315 174 aa9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 PTBP1P26599 531 aaKnown RBP eCLIP9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 RPL27AP46776 148 aaKnown RBP9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 RAB25P57735 213 aa9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 FXYD4P59646 89 aa9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 KRTAP10-11P60412 298 aa9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 ACSM6Q6P461 480 aa9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 HSD17B13Q7Z5P4 300 aaPredicted RBP9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 TMEM17Q86X19 198 aa9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 SNX29P2Q8IUI4 249 aa9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 DCUN1D4Q92564 292 aa9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 ZNF486Q96H40 463 aaPredicted RBP9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 ZNF355PQ9NSJ1 428 aa9.49□□□□□ -0.89
CLTCL1-205ENST00000538828 IGHV4OR15-8A0A075B7B6 117 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 A0A087WW49 117 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 TEX22C9J3V5 150 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 GABARAPH6UMI1 98 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 K7EIL1 84 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 CTDSPLO15194 276 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 MPPED1O15442 326 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 HIST1H1BP16401 226 aaKnown RBP9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 HLA-GP17693 338 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 HLA-DMAP28067 261 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 TSPAN5P62079 268 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 OR2B11Q5JQS5 317 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 AADACL3Q5VUY0 350 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 OR4A47Q6IF82 309 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 CLVS1Q8IUQ0 354 aaPredicted RBP9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 SLC38A6Q8IZM9 456 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 NECAP1Q8NC96 275 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 DYNC2LI1Q8TCX1 351 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 DLX4Q92988 240 aaPredicted RBP9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 DGCR14Q96DF8 476 aaKnown RBP9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 MS4A10Q96PG2 267 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 RSRP1Q9BUV0 290 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 COA4Q9NYJ1 87 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 SIGLEC8Q9NYZ4 499 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 EXTL2Q9UBQ6 330 aa9.48□□□□□ -0.89
CLTCL1-205ENST00000538828 UPK2O00526 184 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 TNFSF12O43508 249 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 NOL3O60936 208 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 CD74P04233 296 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 RPA2P15927 270 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 HOXD3P31249 432 aaPredicted RBP9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 ERVK-16P61578 105 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 RND3P61587 244 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 KLF5Q13887 457 aaPredicted RBP9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 SPCS2Q15005 226 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 TATDN3Q17R31 274 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 RNASE10Q5GAN6 216 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 LHFPL1Q86WI0 220 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 VKORC1L1Q8N0U8 176 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 TMEM229BQ8NBD8 167 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 OR51H1Q8NH63 302 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 FCAMRQ8WWV6 532 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 FYTTD1Q96QD9 318 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 OR5B12Q96R08 314 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 ABHD1Q96SE0 405 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 TSC22D3Q99576 134 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 ELOVL1Q9BW60 279 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 FXYD6Q9H0Q3 95 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 PEF1Q9UBV8 284 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 KLK11Q9UBX7 282 aa9.47□□□□□ -0.89
CLTCL1-205ENST00000538828 WI2-2373I1.2A0A1W2PRP0 233 aa9.46□□□□□ -0.9
CLTCL1-205ENST00000538828 MARCH11A6NNE9 402 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms