RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 RPL30P62888 115 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-209ENST00000536717 REC114Q7Z4M0 266 aa13.95□□□□□ -0.18
TNFRSF1A-209ENST00000536717 CCDC71LQ8N9Z2 235 aa13.95□□□□□ -0.18
TNFRSF1A-209ENST00000536717 OR51H1Q8NH63 302 aa13.95□□□□□ -0.18
TNFRSF1A-209ENST00000536717 MYOZ3Q8TDC0 251 aa13.95□□□□□ -0.18
TNFRSF1A-209ENST00000536717 FLYWCH2Q96CP2 140 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-209ENST00000536717 RAX2Q96IS3 184 aa13.95□□□□□ -0.18
TNFRSF1A-209ENST00000536717 RNF5Q99942 180 aa13.95□□□□□ -0.18
TNFRSF1A-209ENST00000536717 AURKAIP1Q9NWT8 199 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1A-209ENST00000536717 COPZ2Q9P299 210 aa13.95□□□□□ -0.18
TNFRSF1A-209ENST00000536717 FBXO7Q9Y3I1 522 aa13.95□□□□□ -0.18
TNFRSF1A-209ENST00000536717 FCN1O00602 326 aa13.94□□□□□ -0.18
TNFRSF1A-209ENST00000536717 FCGR3BO75015 233 aa13.94□□□□□ -0.18
TNFRSF1A-209ENST00000536717 DUS4LO95620 317 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1A-209ENST00000536717 KIR2DS2P43631 304 aa13.94□□□□□ -0.18
TNFRSF1A-209ENST00000536717 RBMS2Q15434 407 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1A-209ENST00000536717 DEFB136Q30KP8 78 aa13.94□□□□□ -0.18
TNFRSF1A-209ENST00000536717 OR2B11Q5JQS5 317 aa13.94□□□□□ -0.18
TNFRSF1A-209ENST00000536717 GPR132Q9UNW8 380 aa13.94□□□□□ -0.18
TNFRSF1A-209ENST00000536717 IGLV1-40P01703 118 aa13.93□□□□□ -0.18
TNFRSF1A-209ENST00000536717 CCR6P51684 374 aa13.93□□□□□ -0.18
TNFRSF1A-209ENST00000536717 RND3P61587 244 aa13.93□□□□□ -0.18
TNFRSF1A-209ENST00000536717 CX3CL1P78423 397 aa13.93□□□□□ -0.18
TNFRSF1A-209ENST00000536717 KIAA0141Q14154 515 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF1A-209ENST00000536717 C19orf54Q5BKX5 351 aa13.93□□□□□ -0.18
TNFRSF1A-209ENST00000536717 MZT2BQ6NZ67 158 aa13.93□□□□□ -0.18
TNFRSF1A-209ENST00000536717 TBC1D26Q86UD7 250 aa13.93□□□□□ -0.18
TNFRSF1A-209ENST00000536717 OR4S2Q8NH73 311 aa13.93□□□□□ -0.18
TNFRSF1A-209ENST00000536717 CD300LFQ8TDQ1 290 aa13.93□□□□□ -0.18
TNFRSF1A-209ENST00000536717 KLK15Q9H2R5 256 aa13.93□□□□□ -0.18
TNFRSF1A-209ENST00000536717 C5orf66Q9H5L9 145 aa13.93□□□□□ -0.18
TNFRSF1A-209ENST00000536717 TRAV41A0A0B4J266 112 aa13.92□□□□□ -0.18
TNFRSF1A-209ENST00000536717 CCL24O00175 119 aa13.92□□□□□ -0.18
TNFRSF1A-209ENST00000536717 MPPED1O15442 326 aa13.92□□□□□ -0.18
TNFRSF1A-209ENST00000536717 CRYZL1O95825 349 aa13.92□□□□□ -0.18
TNFRSF1A-209ENST00000536717 F2RP25116 425 aa13.92□□□□□ -0.18
TNFRSF1A-209ENST00000536717 CRIP2P52943 208 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF1A-209ENST00000536717 RPS16P62249 146 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-209ENST00000536717 IFITM3Q01628 133 aa13.92□□□□□ -0.18
TNFRSF1A-209ENST00000536717 ASAH1Q13510 395 aa13.92□□□□□ -0.18
TNFRSF1A-209ENST00000536717 PLGLAQ15195 96 aa13.92□□□□□ -0.18
TNFRSF1A-209ENST00000536717 PSG5Q15238 335 aa13.92□□□□□ -0.18
TNFRSF1A-209ENST00000536717 SPAG16Q8N0X2 631 aa13.92□□□□□ -0.18
TNFRSF1A-209ENST00000536717 MINDY2Q8NBR6 621 aa13.92□□□□□ -0.18
TNFRSF1A-209ENST00000536717 RTBDNQ9BSG5 229 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF1A-209ENST00000536717 METTL1Q9UBP6 276 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-209ENST00000536717 VSIG4Q9Y279 399 aa13.92□□□□□ -0.18
TNFRSF1A-209ENST00000536717 SHOXO15266 292 aa13.91□□□□□ -0.18
TNFRSF1A-209ENST00000536717 RBFOX2O43251 390 aaKnown RBP eCLIP13.91□□□□□ -0.18
TNFRSF1A-209ENST00000536717 EGR2P11161 476 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-209ENST00000536717 BTCP35070 178 aa13.91□□□□□ -0.18
TNFRSF1A-209ENST00000536717 DEFA1P59665 94 aa13.91□□□□□ -0.18
TNFRSF1A-209ENST00000536717 DEFA3P59666 94 aa13.91□□□□□ -0.18
TNFRSF1A-209ENST00000536717 ECSCRQ19T08 205 aa13.91□□□□□ -0.18
TNFRSF1A-209ENST00000536717 TMEM177Q53S58 311 aa13.91□□□□□ -0.18
TNFRSF1A-209ENST00000536717 TCTEX1D1Q8N7M0 179 aa13.91□□□□□ -0.18
TNFRSF1A-209ENST00000536717 OSR1Q8TAX0 266 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-209ENST00000536717 C4orf3Q8WVX3 66 aa13.91□□□□□ -0.18
TNFRSF1A-209ENST00000536717 HARBI1Q96MB7 349 aa13.91□□□□□ -0.18
TNFRSF1A-209ENST00000536717 TSNAXQ99598 290 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1A-209ENST00000536717 TBC1D24Q9ULP9 559 aa13.91□□□□□ -0.18
TNFRSF1A-209ENST00000536717 SOX15O60248 233 aa13.9□□□□□ -0.18
TNFRSF1A-209ENST00000536717 NDUFB6O95139 128 aa13.9□□□□□ -0.18
TNFRSF1A-209ENST00000536717 SPDEFO95238 335 aa13.9□□□□□ -0.18
TNFRSF1A-209ENST00000536717 LGALS7P47929 136 aa13.9□□□□□ -0.18
TNFRSF1A-209ENST00000536717 KRTAP10-11P60412 298 aa13.9□□□□□ -0.18
TNFRSF1A-209ENST00000536717 CLCC1Q96S66 551 aa13.9□□□□□ -0.18
TNFRSF1A-209ENST00000536717 TPSG1Q9NRR2 321 aa13.9□□□□□ -0.18
TNFRSF1A-209ENST00000536717 NUBP2Q9Y5Y2 271 aa13.9□□□□□ -0.18
TNFRSF1A-209ENST00000536717 TEX13DA0A0J9YY54 714 aaPredicted RBP13.9□□□□□ -0.19
TNFRSF1A-209ENST00000536717 RAMP3O60896 148 aa13.9□□□□□ -0.19
TNFRSF1A-209ENST00000536717 IGLV2-23P01705 113 aa13.9□□□□□ -0.19
TNFRSF1A-209ENST00000536717 HOXD3P31249 432 aaPredicted RBP13.9□□□□□ -0.19
TNFRSF1A-209ENST00000536717 BRWD1-AS2P59051 145 aa13.9□□□□□ -0.19
TNFRSF1A-209ENST00000536717 EGFEM1PQ0D2K5 195 aa13.9□□□□□ -0.19
TNFRSF1A-209ENST00000536717 TMED4Q7Z7H5 227 aa13.9□□□□□ -0.19
TNFRSF1A-209ENST00000536717 ZNF491Q8N8L2 437 aa13.9□□□□□ -0.19
TNFRSF1A-209ENST00000536717 MRAPQ8TCY5 172 aa13.9□□□□□ -0.19
TNFRSF1A-209ENST00000536717 UBE2E2Q96LR5 201 aa13.9□□□□□ -0.19
TNFRSF1A-209ENST00000536717 FAM103A1Q9BTL3 118 aaKnown RBP13.9□□□□□ -0.19
TNFRSF1A-209ENST00000536717 GNB4Q9HAV0 340 aa13.9□□□□□ -0.19
TNFRSF1A-209ENST00000536717 SORL1Q92673 2214 aa13.89□□□□□ -0.19
TNFRSF1A-209ENST00000536717 FAM240BA0A1B0GVZ2 78 aa13.89□□□□□ -0.19
TNFRSF1A-209ENST00000536717 A0A1W2PN81 502 aa13.89□□□□□ -0.19
TNFRSF1A-209ENST00000536717 SLC25A17O43808 307 aa13.89□□□□□ -0.19
TNFRSF1A-209ENST00000536717 HPRT1P00492 218 aa13.89□□□□□ -0.19
TNFRSF1A-209ENST00000536717 CA2P00918 260 aa13.89□□□□□ -0.19
TNFRSF1A-209ENST00000536717 CHRNA7P36544 502 aa13.89□□□□□ -0.19
TNFRSF1A-209ENST00000536717 RAB9AP51151 201 aa13.89□□□□□ -0.19
TNFRSF1A-209ENST00000536717 FHL3Q13643 280 aa13.89□□□□□ -0.19
TNFRSF1A-209ENST00000536717 TMEM65Q6PI78 240 aa13.89□□□□□ -0.19
TNFRSF1A-209ENST00000536717 ZNF562Q6V9R5 426 aa13.89□□□□□ -0.19
TNFRSF1A-209ENST00000536717 SGPP2Q8IWX5 399 aa13.89□□□□□ -0.19
TNFRSF1A-209ENST00000536717 AIFM2Q9BRQ8 373 aa13.89□□□□□ -0.19
TNFRSF1A-209ENST00000536717 MCRIP2Q9BUT9 160 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-209ENST00000536717 FAM212BQ9NTI7 297 aaPredicted RBP13.89□□□□□ -0.19
TNFRSF1A-209ENST00000536717 DNAH9Q9NYC9 4486 aa13.88□□□□□ -0.19
TNFRSF1A-209ENST00000536717 C3orf85A0A1B0GTC6 90 aa13.88□□□□□ -0.19
TNFRSF1A-209ENST00000536717 H0Y980 276 aa13.88□□□□□ -0.19
TNFRSF1A-209ENST00000536717 I3L521 148 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms