RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 LSM10Q969L4 123 aaKnown RBP11.79□□□□□ -0.52
TCOF1-207ENST00000504761 PPP1R2P9O14990 202 aa11.78□□□□□ -0.52
TCOF1-207ENST00000504761 CD24P25063 80 aa11.78□□□□□ -0.52
TCOF1-207ENST00000504761 COLCA1Q6ZS62 124 aa11.78□□□□□ -0.52
TCOF1-207ENST00000504761 PXMP4Q9Y6I8 212 aa11.78□□□□□ -0.52
TCOF1-207ENST00000504761 DENND4AQ7Z401 1863 aa11.78□□□□□ -0.52
TCOF1-207ENST00000504761 IGHV3-35A0A0C4DH35 117 aa11.78□□□□□ -0.52
TCOF1-207ENST00000504761 CEACAM18A8MTB9 384 aa11.78□□□□□ -0.52
TCOF1-207ENST00000504761 SUPT4H1P63272 117 aaKnown RBP11.78□□□□□ -0.52
TCOF1-207ENST00000504761 SPRY4Q9C004 299 aa11.78□□□□□ -0.52
TCOF1-207ENST00000504761 ZNF146Q15072 292 aa11.78□□□□□ -0.52
TCOF1-207ENST00000504761 NHLRC3Q5JS37 347 aa11.78□□□□□ -0.52
TCOF1-207ENST00000504761 OR4F17Q8NGA8 305 aa11.78□□□□□ -0.52
TCOF1-207ENST00000504761 OR5B3Q8NH48 314 aa11.78□□□□□ -0.52
TCOF1-207ENST00000504761 RNF126Q9BV68 326 aa11.78□□□□□ -0.52
TCOF1-207ENST00000504761 IGFL3Q6UXB1 125 aa11.78□□□□□ -0.52
TCOF1-207ENST00000504761 C20orf204Q6ZNR8 217 aa11.78□□□□□ -0.52
TCOF1-207ENST00000504761 MMD2Q8IY49 270 aa11.78□□□□□ -0.52
TCOF1-207ENST00000504761 CD177Q8N6Q3 437 aa11.78□□□□□ -0.52
TCOF1-207ENST00000504761 TMEM186Q96B77 213 aa11.78□□□□□ -0.52
TCOF1-207ENST00000504761 TECRQ9NZ01 308 aaKnown RBP11.78□□□□□ -0.52
TCOF1-207ENST00000504761 SPP1P10451 314 aa11.77□□□□□ -0.52
TCOF1-207ENST00000504761 RND2P52198 227 aa11.77□□□□□ -0.52
TCOF1-207ENST00000504761 LINC00205P59089 165 aa11.77□□□□□ -0.52
TCOF1-207ENST00000504761 LY6EQ16553 131 aa11.77□□□□□ -0.52
TCOF1-207ENST00000504761 MBNL2Q5VZF2 373 aaKnown RBP11.77□□□□□ -0.52
TCOF1-207ENST00000504761 LHFPL1Q86WI0 220 aa11.77□□□□□ -0.52
TCOF1-207ENST00000504761 RNF138Q8WVD3 245 aa11.77□□□□□ -0.52
TCOF1-207ENST00000504761 CCL19Q99731 98 aa11.77□□□□□ -0.52
TCOF1-207ENST00000504761 CTXND1A0A1B0GTU2 59 aa11.77□□□□□ -0.53
TCOF1-207ENST00000504761 MMP9P14780 707 aa11.77□□□□□ -0.53
TCOF1-207ENST00000504761 ANOS1P23352 680 aa11.77□□□□□ -0.53
TCOF1-207ENST00000504761 FABP9Q0Z7S8 132 aa11.77□□□□□ -0.53
TCOF1-207ENST00000504761 FAM222BQ8WU58 562 aa11.77□□□□□ -0.53
TCOF1-207ENST00000504761 C1orf147Q96MC9 270 aaPredicted RBP11.77□□□□□ -0.53
TCOF1-207ENST00000504761 MRPL20Q9BYC9 149 aaKnown RBP11.77□□□□□ -0.53
TCOF1-207ENST00000504761 FAM215AQ9Y5M1 114 aa11.77□□□□□ -0.53
TCOF1-207ENST00000504761 MORN2Q502X0 79 aa11.77□□□□□ -0.53
TCOF1-207ENST00000504761 OR1L4Q8NGR5 311 aa11.77□□□□□ -0.53
TCOF1-207ENST00000504761 NAPSAO96009 420 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 GUCA2BQ16661 112 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 CLRN3Q8NCR9 226 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 TUBD1Q9UJT1 453 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 KIAA1549LQ6ZVL6 1849 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 FAM157CP0CG43 387 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 SERF2P84101 59 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 ZNF324BQ6AW86 544 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-207ENST00000504761 OR8I2Q8N0Y5 310 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 CYB561D1Q8N8Q1 229 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 CTDSP1Q9GZU7 261 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 AAMDCQ9H7C9 122 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 VAX2Q9UIW0 290 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 SAA2-SAA4A0A096LPE2 208 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 C7orf77A4D0Y5 90 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 SAA2P0DJI9 122 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-207ENST00000504761 TMEM37Q8WXS4 190 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 FBXL15Q9H469 300 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 LINC00312Q9Y6C7 94 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 GNG4P50150 75 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 RND3P61587 244 aa11.76□□□□□ -0.53
TCOF1-207ENST00000504761 SUMO1P63165 101 aaKnown RBP11.76□□□□□ -0.53
TCOF1-207ENST00000504761 EAF1Q96JC9 268 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-207ENST00000504761 PRUNE2Q8WUY3 3088 aa11.75□□□□□ -0.53
TCOF1-207ENST00000504761 ARFGEF3Q5TH69 2177 aa11.75□□□□□ -0.53
TCOF1-207ENST00000504761 FAM90A26D6RGX4 464 aa11.75□□□□□ -0.53
TCOF1-207ENST00000504761 LINC00869P0C866 280 aa11.75□□□□□ -0.53
TCOF1-207ENST00000504761 RANP62826 216 aaKnown RBP11.75□□□□□ -0.53
TCOF1-207ENST00000504761 C10orf113Q5VZT2 155 aa11.75□□□□□ -0.53
TCOF1-207ENST00000504761 OR4A47Q6IF82 309 aa11.75□□□□□ -0.53
TCOF1-207ENST00000504761 SSBP3Q9BWW4 388 aaPredicted RBP11.75□□□□□ -0.53
TCOF1-207ENST00000504761 CLDN34H7C241 214 aa11.75□□□□□ -0.53
TCOF1-207ENST00000504761 OR5I1Q13606 314 aa11.75□□□□□ -0.53
TCOF1-207ENST00000504761 ADIPOQQ15848 244 aa11.75□□□□□ -0.53
TCOF1-207ENST00000504761 BSXQ3C1V8 233 aa11.75□□□□□ -0.53
TCOF1-207ENST00000504761 DCAF16Q9NXF7 216 aa11.75□□□□□ -0.53
TCOF1-207ENST00000504761 S4R3C0 116 aa11.75□□□□□ -0.53
TCOF1-207ENST00000504761 USF1P22415 310 aaPredicted RBP11.75□□□□□ -0.53
TCOF1-207ENST00000504761 BSCL2Q96G97 398 aaPredicted RBP11.75□□□□□ -0.53
TCOF1-207ENST00000504761 SONP18583 2426 aaKnown RBP11.74□□□□□ -0.53
TCOF1-207ENST00000504761 ZNF672Q499Z4 452 aaPredicted RBP11.74□□□□□ -0.53
TCOF1-207ENST00000504761 PDPNQ86YL7 162 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 LHFPL5Q8TAF8 219 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 RAB24Q969Q5 203 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 SMIM8Q96KF7 97 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 PIMREGQ9BSJ6 248 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 H0Y8G0 127 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 H3BQ15 152 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 TM4SF5O14894 197 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 HSPB1P04792 205 aaKnown RBP11.74□□□□□ -0.53
TCOF1-207ENST00000504761 FAM106CPP0CH98 169 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 ZNF880Q6PDB4 577 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 RARRES2Q99969 163 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 RPRMQ9NS64 109 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 CRYBA1P05813 215 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 PDLIM4P50479 330 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 TCL1AP56279 114 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 G3V3Q6 166 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 CA2P00918 260 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 CA7P43166 264 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 DLK1P80370 383 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms