RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 NFYBP25208 207 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 ARL3P36405 182 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 LGALS7P47929 136 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 NPBWR2P48146 333 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 SERPINB10P48595 397 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 RBM11P57052 281 aaKnown RBP2.92□□□□□ -1.94
USP54-217ENST00000498213 KIAA0141Q14154 515 aaPredicted RBP2.92□□□□□ -1.94
USP54-217ENST00000498213 RSU1Q15404 277 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 MMDQ15546 238 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 C5orf64Q2M2E5 130 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 RBM48Q5RL73 367 aaKnown RBP2.92□□□□□ -1.94
USP54-217ENST00000498213 FAAP20Q6NZ36 180 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 ZNF773Q6PK81 442 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 CEMP1Q6PRD7 247 aaPredicted RBP2.92□□□□□ -1.94
USP54-217ENST00000498213 TCEANCQ8N8B7 351 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.92□□□□□ -1.94
USP54-217ENST00000498213 ZNF439Q8NDP4 499 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 BBS1Q8NFJ9 593 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 BPIFB6Q8NFQ5 453 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 TSPAN14Q8NG11 270 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 OR13C3Q8NGS6 347 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 OR5AK2Q8NH90 309 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 RHOXF1Q8NHV9 184 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 GPR148Q8TDV2 347 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 GGHQ92820 318 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 GALMQ96C23 342 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 ADAT3Q96EY9 351 aaPredicted RBP2.92□□□□□ -1.94
USP54-217ENST00000498213 PELI1Q96FA3 418 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 ATP6V0BQ99437 205 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 TSNAXQ99598 290 aaKnown RBP2.92□□□□□ -1.94
USP54-217ENST00000498213 APOL4Q9BPW4 351 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 UQCC2Q9BRT2 126 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 MRPS26Q9BYN8 205 aaKnown RBP2.92□□□□□ -1.94
USP54-217ENST00000498213 NAA50Q9GZZ1 169 aaKnown RBP2.92□□□□□ -1.94
USP54-217ENST00000498213 DUSP21Q9H596 190 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 AMBNQ9NP70 447 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 GNG12Q9UBI6 72 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 PSORS1C1Q9UIG5 152 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 KIF25Q9UIL4 384 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 ORC6Q9Y5N6 252 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 NUBP2Q9Y5Y2 271 aa2.92□□□□□ -1.94
USP54-217ENST00000498213 TRBV6-6A0A0A6YYG2 114 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 IGHV7-81A0A0B4J1V7 117 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 TRAV25A0A0B4J276 109 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 IGKV1-12A0A0C4DH73 117 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 DAPL1A0PJW8 107 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 FAM223BA6NKX1 122 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 OR4C45A6NMZ5 311 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 PTGES3LE9PB15 166 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 AIPO00170 330 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 UBE2CO00762 179 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 OR7C1O76099 320 aaPredicted RBP2.91□□□□□ -1.94
USP54-217ENST00000498213 CNIH1O95406 144 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 IGKV1D-12P01611 117 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 MT-ND4P03905 459 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 RRASP10301 218 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 FUT3P21217 361 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 MAPK3P27361 379 aaPredicted RBP2.91□□□□□ -1.94
USP54-217ENST00000498213 DCKP27707 260 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 ZNF93P35789 620 aaPredicted RBP2.91□□□□□ -1.94
USP54-217ENST00000498213 GBX2P52951 348 aaPredicted RBP2.91□□□□□ -1.94
USP54-217ENST00000498213 CMC4P56277 68 aaPredicted RBP2.91□□□□□ -1.94
USP54-217ENST00000498213 TAS2R43P59537 309 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 GABARAPL2P60520 117 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 ACTBP60709 375 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 GAGE2BQ13066 116 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 TPBGQ13641 420 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 KLF5Q13887 457 aaPredicted RBP2.91□□□□□ -1.94
USP54-217ENST00000498213 IRF3Q14653 427 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 ATXN7L3Q14CW9 347 aaPredicted RBP2.91□□□□□ -1.94
USP54-217ENST00000498213 NEDD8Q15843 81 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 DEFB136Q30KP8 78 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 GAGE2EQ4V326 116 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 YIF1BQ5BJH7 314 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 GAGE2AQ6NT46 116 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 RPL22L1Q6P5R6 122 aaKnown RBP2.91□□□□□ -1.94
USP54-217ENST00000498213 LINC00322Q6ZN03 302 aaPredicted RBP2.91□□□□□ -1.94
USP54-217ENST00000498213 ZNF833PQ6ZTB9 187 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 AHSA2Q719I0 299 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 PDPNQ86YL7 162 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 FAM223AQ8IWN6 122 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 PRSS35Q8N3Z0 413 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 TPRX1Q8N7U7 411 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 SUMF2Q8NBJ7 301 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 OR10H4Q8NGA5 316 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 OR9G4Q8NGQ1 327 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 OR52N1Q8NH53 320 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 DCUN1D4Q92564 292 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 ARL11Q969Q4 196 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 MARC2Q969Z3 335 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 PTX4Q96A99 478 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 FGGYQ96C11 551 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 SPACA5Q96QH8 159 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 GPER1Q99527 375 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 YTHDF1Q9BYJ9 559 aaKnown RBP2.91□□□□□ -1.94
USP54-217ENST00000498213 OR2S2Q9NQN1 319 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 PLCXD1Q9NUJ7 323 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 SLC2A8Q9NY64 477 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 ABRACLQ9P1F3 81 aa2.91□□□□□ -1.94
USP54-217ENST00000498213 GAGE2DQ9UEU5 116 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms