RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	NUS1	Q96E22	293 aa		3.95	□□□□□ -1.78
PTCD3-212	ENST00000477520	C5orf30	Q96GV9	206 aa		3.95	□□□□□ -1.78
PTCD3-212	ENST00000477520	SMIM10	Q96HG1	83 aa		3.95	□□□□□ -1.78
PTCD3-212	ENST00000477520	C1orf147	Q96MC9	270 aa	Predicted RBP	3.95	□□□□□ -1.78
PTCD3-212	ENST00000477520	OR6C1	Q96RD1	312 aa		3.95	□□□□□ -1.78
PTCD3-212	ENST00000477520	DERL1	Q9BUN8	251 aa		3.95	□□□□□ -1.78
PTCD3-212	ENST00000477520	NPFFR1	Q9GZQ6	430 aa		3.95	□□□□□ -1.78
PTCD3-212	ENST00000477520	GEMIN7	Q9H840	131 aa	Known RBP	3.95	□□□□□ -1.78
PTCD3-212	ENST00000477520	SAP30L	Q9HAJ7	183 aa		3.95	□□□□□ -1.78
PTCD3-212	ENST00000477520	STARD5	Q9NSY2	213 aa		3.95	□□□□□ -1.78
PTCD3-212	ENST00000477520	ZNF581	Q9P0T4	197 aa		3.95	□□□□□ -1.78
PTCD3-212	ENST00000477520	JPT1	Q9UK76	154 aa		3.95	□□□□□ -1.78
PTCD3-212	ENST00000477520	CYSLTR1	Q9Y271	337 aa		3.95	□□□□□ -1.78
PTCD3-212	ENST00000477520	LRRK1	Q38SD2	2015 aa		3.95	□□□□□ -1.78
PTCD3-212	ENST00000477520	FANCM	Q8IYD8	2048 aa		3.95	□□□□□ -1.78
PTCD3-212	ENST00000477520	GPR179	Q6PRD1	2367 aa		3.95	□□□□□ -1.78
PTCD3-212	ENST00000477520	EML5	Q05BV3	1969 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	IGKV1D-42	A0A075B6H8	117 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	TRAV26-1	A0A087WT03	109 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520		A0A0A6YYD4	124 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520		A0A1W2PPC4	97 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	FEZF1	A0PJY2	475 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	FAM90A10P	A6NDY2	464 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	FAM90A18P	A6NE21	464 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	FAM90A16P	A6NEW6	464 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	OR2T8	A6NH00	312 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	FAM90A20P	A6NIJ5	464 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	FAM90A8P	A6NJQ4	464 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	GLOD5	A6NK44	160 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	SLC22A20	A6NK97	555 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	FAM90A7P	A6NKC0	464 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	ZNF716	A6NP11	495 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	FAM90A22P	A8MWA6	464 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	FAM90A12P	A8MX19	464 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	FAM90A5P	A8MXJ8	464 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	FAM90A23P	A8MXZ1	464 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	SNURFL	B1AK76	121 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	C11orf94	C9JXX5	98 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520		H7C1C5	153 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	SLC31A1	O15431	190 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	CHST1	O43916	411 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	SSSCA1	O60232	199 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	SLC16A7	O60669	478 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	AMY1A	P04745	511 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	FAM90A15P	P0C7V4	464 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	FAM90A13P	P0C7W8	464 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	FAM90A14P	P0C7W9	464 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	FAM90A24P	P0C7X0	464 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	PSG2	P11465	335 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	FABP2	P12104	132 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	HLA-DOB	P13765	273 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	IGLL1	P15814	213 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	USF1	P22415	310 aa	Predicted RBP	3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	CTSS	P25774	331 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	GPR183	P32249	361 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	GPR1	P46091	355 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	DUSP3	P51452	185 aa	Predicted RBP	3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	METAP1	P53582	386 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	YPEL5	P62699	121 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	GRB2	P62993	217 aa	Known RBP	3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	GAGE5	Q13069	117 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	GAGE6	Q13070	117 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	ZNF726P1	Q15940	193 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	PRICKLE4	Q2TBC4	344 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520		Q5PR19	223 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	TIMM23B	Q5SRD1	257 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	LYSMD4	Q5XG99	296 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	CCDC144NL	Q6NUI1	221 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	UEVLD	Q8IX04	471 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	OR8I2	Q8N0Y5	310 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	OR5AS1	Q8N127	324 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	OR4X2	Q8NGF9	303 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	OR10G7	Q8NGN6	311 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	OR10AG1	Q8NH19	301 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	NEUROG1	Q92886	237 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	GPR82	Q96P67	336 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	TMEM147	Q9BVK8	224 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	CLEC7A	Q9BXN2	247 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	PBOV1	Q9GZY1	135 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	OR2D2	Q9H210	308 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	GNB4	Q9HAV0	340 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	HES4	Q9HCC6	221 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	OSTC	Q9NRP0	149 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	PHPT1	Q9NRX4	125 aa	Predicted RBP	3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	DAPP1	Q9UN19	280 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	ZNF257	Q9Y2Q1	563 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	TDRD6	O60522	2096 aa	Known RBP	3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	OTOGL	Q3ZCN5	2332 aa		3.94	□□□□□ -1.78
PTCD3-212	ENST00000477520	KNTC1	P50748	2209 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	KMT2E	Q8IZD2	1858 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	TRAV8-6	A0A0B4J262	113 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520		A0A0J9YY10	115 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	KIR2DS1	A0A191URI9	304 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520		A0A1B0GX78	115 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	GRIFIN	A4D1Z8	144 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	LRRC30	A6NM36	301 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	CD300LB	A8K4G0	201 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	F2RL2	O00254	374 aa		3.93	□□□□□ -1.78
PTCD3-212	ENST00000477520	ISLR	O14498	428 aa		3.93	□□□□□ -1.78

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