RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 OR10X1Q8NGY0 326 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 OR5B3Q8NH48 314 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 OR5P3Q8WZ94 311 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 FOXD3Q9UJU5 478 aaPredicted RBP4.2□□□□□ -1.74
CCDC39-204ENST00000476379 LOC390937A0A1W2PQ73 354 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 TMEM30CPA0ZSE6 113 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 DBX1A6NMT0 343 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 FGF16O43320 207 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 CNIH1O95406 144 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 MOSP00540 346 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 IGHEP01854 428 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 CEACAM1P13688 526 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 CRYBB3P26998 211 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 DDTP30046 118 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 HOXA6P31267 233 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 HINT1P49773 126 aaPredicted RBP4.2□□□□□ -1.74
CCDC39-204ENST00000476379 FXYD7P58549 80 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 IL11RAQ14626 422 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 PRR7Q8TB68 274 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 TAF15Q92804 592 aaKnown RBP eCLIP4.2□□□□□ -1.74
CCDC39-204ENST00000476379 C14orf144Q96I85 54 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 SSBP4Q9BWG4 385 aaPredicted RBP4.2□□□□□ -1.74
CCDC39-204ENST00000476379 ANGPTL4Q9BY76 406 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 RNF122Q9H9V4 155 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.2□□□□□ -1.74
CCDC39-204ENST00000476379 CLEC5AQ9NY25 188 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 KIAA1456Q9P272 454 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 POLDIP2Q9Y2S7 368 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 CARHSP1Q9Y2V2 147 aaKnown RBP4.2□□□□□ -1.74
CCDC39-204ENST00000476379 KIAA1549Q9HCM3 1950 aa4.2□□□□□ -1.74
CCDC39-204ENST00000476379 CGB1A6NKQ9 187 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 MARCH11A6NNE9 402 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 M0QZ24 198 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 ZNF253O75346 499 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 SMIM6P0DI80 62 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 CSRP1P21291 193 aaKnown RBP4.19□□□□□ -1.74
CCDC39-204ENST00000476379 LGALS4P56470 323 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 RAB31Q13636 194 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 CEACAM21Q3KPI0 293 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 LHFPL1Q86WI0 220 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 KLF14Q8TD94 323 aaPredicted RBP4.19□□□□□ -1.74
CCDC39-204ENST00000476379 DPF1Q92782 380 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 PTX4Q96A99 478 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 TMEM18Q96B42 140 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 RNASE7Q9H1E1 156 aaKnown RBP4.19□□□□□ -1.74
CCDC39-204ENST00000476379 TNFRSF19Q9NS68 423 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 IGHV3-49A0A0A0MS15 119 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 ZNF891A8MT65 544 aaPredicted RBP4.19□□□□□ -1.74
CCDC39-204ENST00000476379 A8MXE2 369 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 C17orf112F2Z3M2 114 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 NDUFS8O00217 210 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 TCF21O43680 179 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 LY6HO94772 140 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 PTBP3O95758 552 aaKnown RBP4.19□□□□□ -1.74
CCDC39-204ENST00000476379 CGAP01215 116 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 OR4A8P0C604 315 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 ARR3P36575 388 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 ECI1P42126 302 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 PCP4P48539 62 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 PSG7Q13046 419 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 RNFT1Q5M7Z0 435 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 C11orf42Q8N5U0 333 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 FAM216BQ8N7L0 139 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 SIGLECL1Q8N7X8 197 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 OR5A2Q8NGI9 324 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 OR1B1Q8NGR6 318 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 MARVELD3Q96A59 401 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 OR2V2Q96R30 315 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 COMMD5Q9GZQ3 224 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 PCED1AQ9H1Q7 454 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 GSX1Q9H4S2 264 aaPredicted RBP4.19□□□□□ -1.74
CCDC39-204ENST00000476379 SEC14L6B5MCN3 397 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 PITX3O75364 302 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 CDS2O95674 445 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 IGHV3-23P01764 117 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 RBP4P02753 201 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 PF4V1P10720 104 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 HLA-GP17693 338 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 COL8A1P27658 744 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 CHRNB4P30926 498 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 GNB2P62879 340 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 FAM27E3Q08E93 113 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 IL24Q13007 206 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 TMEM211Q6ICI0 200 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 PQLC2Q6ZP29 291 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 SLC35E3Q7Z769 313 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 RPP25LQ8N5L8 163 aaKnown RBP4.19□□□□□ -1.74
CCDC39-204ENST00000476379 OR4X1Q8NH49 305 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 ITLN1Q8WWA0 313 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 NEIL1Q96FI4 390 aaPredicted RBP4.19□□□□□ -1.74
CCDC39-204ENST00000476379 LINC00479Q96M42 142 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 RAB40CQ96S21 281 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 NAA38Q9BRA0 125 aaKnown RBP4.19□□□□□ -1.74
CCDC39-204ENST00000476379 SEPSECSQ9HD40 501 aaKnown RBP4.19□□□□□ -1.74
CCDC39-204ENST00000476379 ASCL3Q9NQ33 180 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 PLSCR2Q9NRY7 297 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 FKBP11Q9NYL4 201 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 VAX2Q9UIW0 290 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 TENM4Q6N022 2769 aa4.19□□□□□ -1.74
CCDC39-204ENST00000476379 C5orf52A6NGY3 159 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms