RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 LRFN3Q9BTN0 628 aa13.24□□□□□ -0.29
VARS2-207ENST00000476162 WDR61Q9GZS3 305 aaKnown RBP13.24□□□□□ -0.29
VARS2-207ENST00000476162 GCM1Q9NP62 436 aa13.24□□□□□ -0.29
VARS2-207ENST00000476162 Q9UFV3 132 aa13.24□□□□□ -0.29
VARS2-207ENST00000476162 DCHS1Q96JQ0 3298 aa13.24□□□□□ -0.29
VARS2-207ENST00000476162 KIR2DL5BA0A0G2JN68 375 aa13.24□□□□□ -0.29
VARS2-207ENST00000476162 KIR2DL5BA0A0G2JPC4 375 aa13.24□□□□□ -0.29
VARS2-207ENST00000476162 PRRG2O14669 202 aa13.24□□□□□ -0.29
VARS2-207ENST00000476162 YPEL1O60688 119 aa13.24□□□□□ -0.29
VARS2-207ENST00000476162 ZG16O60844 167 aa13.24□□□□□ -0.29
VARS2-207ENST00000476162 RBMXL2O75526 392 aaKnown RBP13.24□□□□□ -0.29
VARS2-207ENST00000476162 IGHV1-46P01743 117 aa13.24□□□□□ -0.29
VARS2-207ENST00000476162 CD55P08174 381 aa13.24□□□□□ -0.29
VARS2-207ENST00000476162 DUTP33316 252 aaKnown RBP13.24□□□□□ -0.29
VARS2-207ENST00000476162 GATA4P43694 442 aa13.24□□□□□ -0.29
VARS2-207ENST00000476162 ZNF134P52741 427 aa13.24□□□□□ -0.29
VARS2-207ENST00000476162 LOXL3P58215 753 aa13.24□□□□□ -0.29
VARS2-207ENST00000476162 TNFAIP6P98066 277 aaPredicted RBP13.24□□□□□ -0.29
VARS2-207ENST00000476162 KIR2DL5AQ8N109 375 aa13.24□□□□□ -0.29
VARS2-207ENST00000476162 YPEL2Q96QA6 119 aa13.24□□□□□ -0.29
VARS2-207ENST00000476162 DIRC2Q96SL1 478 aa13.24□□□□□ -0.29
VARS2-207ENST00000476162 PSMG3Q9BT73 122 aaPredicted RBP13.24□□□□□ -0.29
VARS2-207ENST00000476162 LAMP3Q9UQV4 416 aa13.24□□□□□ -0.29
VARS2-207ENST00000476162 UBE2L5PA0A1B0GUS4 154 aa13.23□□□□□ -0.29
VARS2-207ENST00000476162 HBE1P02100 147 aa13.23□□□□□ -0.29
VARS2-207ENST00000476162 HSPB1P04792 205 aaKnown RBP13.23□□□□□ -0.29
VARS2-207ENST00000476162 ICAM4Q14773 271 aa13.23□□□□□ -0.29
VARS2-207ENST00000476162 IQCJQ1A5X6 159 aa13.23□□□□□ -0.29
VARS2-207ENST00000476162 DUX4L9Q6RFH8 374 aaPredicted RBP13.23□□□□□ -0.29
VARS2-207ENST00000476162 CLDND2Q8NHS1 167 aa13.23□□□□□ -0.29
VARS2-207ENST00000476162 RBMXL1Q96E39 390 aaKnown RBP13.23□□□□□ -0.29
VARS2-207ENST00000476162 CLDN34H7C241 214 aa13.23□□□□□ -0.29
VARS2-207ENST00000476162 F2RL2O00254 374 aa13.23□□□□□ -0.29
VARS2-207ENST00000476162 FCGR3BO75015 233 aa13.23□□□□□ -0.29
VARS2-207ENST00000476162 CYB5R3P00387 301 aaPredicted RBP13.23□□□□□ -0.29
VARS2-207ENST00000476162 RBX1P62877 108 aa13.23□□□□□ -0.29
VARS2-207ENST00000476162 SPINK9Q5DT21 86 aa13.23□□□□□ -0.29
VARS2-207ENST00000476162 Q8NA96 180 aa13.23□□□□□ -0.29
VARS2-207ENST00000476162 CALYQ9NYX4 217 aa13.23□□□□□ -0.29
VARS2-207ENST00000476162 OR6C3Q9NZP0 311 aa13.23□□□□□ -0.29
VARS2-207ENST00000476162 RNF7Q9UBF6 113 aa13.23□□□□□ -0.29
VARS2-207ENST00000476162 IL19Q9UHD0 177 aa13.23□□□□□ -0.29
VARS2-207ENST00000476162 SH3BGRL2Q9UJC5 107 aa13.23□□□□□ -0.29
VARS2-207ENST00000476162 PIEZO2Q9H5I5 2752 aa13.22□□□□□ -0.29
VARS2-207ENST00000476162 DOCK11Q5JSL3 2073 aa13.22□□□□□ -0.29
VARS2-207ENST00000476162 MDKP21741 143 aaPredicted RBP13.22□□□□□ -0.29
VARS2-207ENST00000476162 ZNF726P1Q15940 193 aa13.22□□□□□ -0.29
VARS2-207ENST00000476162 RPL39P5Q59GN2 51 aa13.22□□□□□ -0.29
VARS2-207ENST00000476162 UTF1Q5T230 341 aa13.22□□□□□ -0.29
VARS2-207ENST00000476162 MRGPRGQ86SM5 289 aa13.22□□□□□ -0.29
VARS2-207ENST00000476162 ZGRF1Q86YA3 2104 aa13.22□□□□□ -0.29
VARS2-207ENST00000476162 DEFB108BQ8NET1 73 aa13.22□□□□□ -0.29
VARS2-207ENST00000476162 TAF15Q92804 592 aaKnown RBP eCLIP13.22□□□□□ -0.29
VARS2-207ENST00000476162 FAM234AQ9H0X4 552 aa13.22□□□□□ -0.29
VARS2-207ENST00000476162 LPAR2Q9HBW0 351 aa13.22□□□□□ -0.29
VARS2-207ENST00000476162 DSCAMO60469 2012 aa13.22□□□□□ -0.29
VARS2-207ENST00000476162 TRAV1-1A0A0B4J248 108 aa13.21□□□□□ -0.29
VARS2-207ENST00000476162 M0R1X1 148 aa13.21□□□□□ -0.29
VARS2-207ENST00000476162 ATXN7O15265 892 aaPredicted RBP13.21□□□□□ -0.29
VARS2-207ENST00000476162 PDLIM4P50479 330 aa13.21□□□□□ -0.29
VARS2-207ENST00000476162 RPS16P62249 146 aaKnown RBP13.21□□□□□ -0.29
VARS2-207ENST00000476162 SERF2P84101 59 aa13.21□□□□□ -0.29
VARS2-207ENST00000476162 FOXC1Q12948 553 aa13.21□□□□□ -0.29
VARS2-207ENST00000476162 ZNF506Q5JVG8 444 aa13.21□□□□□ -0.29
VARS2-207ENST00000476162 LCN15Q6UWW0 184 aa13.21□□□□□ -0.29
VARS2-207ENST00000476162 FAM222BQ8WU58 562 aa13.21□□□□□ -0.29
VARS2-207ENST00000476162 LEAP2Q969E1 77 aa13.21□□□□□ -0.29
VARS2-207ENST00000476162 PARD6GQ9BYG4 376 aaPredicted RBP13.21□□□□□ -0.29
VARS2-207ENST00000476162 IFI27L2Q9H2X8 130 aa13.21□□□□□ -0.29
VARS2-207ENST00000476162 C16orf97H3BN30 126 aa13.21□□□□□ -0.29
VARS2-207ENST00000476162 CGB3P0DN86 165 aa13.21□□□□□ -0.29
VARS2-207ENST00000476162 CGB7P0DN87 165 aa13.21□□□□□ -0.29
VARS2-207ENST00000476162 RPL29P47914 159 aaKnown RBP13.21□□□□□ -0.29
VARS2-207ENST00000476162 C17orf58Q2M2W7 97 aa13.21□□□□□ -0.29
VARS2-207ENST00000476162 TMEM108Q6UXF1 575 aa13.21□□□□□ -0.29
VARS2-207ENST00000476162 TGIF2LYQ8IUE0 185 aa13.21□□□□□ -0.29
VARS2-207ENST00000476162 OR10A7Q8NGE5 316 aa13.21□□□□□ -0.29
VARS2-207ENST00000476162 XKRY2A2RUG3 117 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 PMS2P5A8MQ11 134 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 CEBPZOSA8MTT3 80 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 OR9G9P0C7N8 305 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 BRS3P32247 399 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 ELLP55199 621 aaPredicted RBP13.2□□□□□ -0.3
VARS2-207ENST00000476162 STUMQ69YW2 141 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 SSX7Q7RTT5 188 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 WFDC8Q8IUA0 241 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 SRD5A3Q9H8P0 318 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 GNG13Q9P2W3 67 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 POLR3KQ9Y2Y1 108 aaPredicted RBP13.2□□□□□ -0.3
VARS2-207ENST00000476162 CUL9Q8IWT3 2517 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 HPRT1P00492 218 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 IRF2P14316 349 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 TNFSF4P23510 183 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 FGF8P55075 233 aaPredicted RBP13.2□□□□□ -0.3
VARS2-207ENST00000476162 ZNF787Q6DD87 383 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 GFRALQ6UXV0 394 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 SPACA3Q8IXA5 215 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 NUP37Q8NFH4 326 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 OR10P1Q8NGE3 313 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 SDSLQ96GA7 329 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms