RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 GEMIN2O14893 280 aaKnown RBP3.44□□□□□ -1.86
VPS13D-206ENST00000476045 ADAM20O43506 726 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 PDCD6O75340 191 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 DEDDO75618 318 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 SNAPINO95295 136 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 CYB5R3P00387 301 aaPredicted RBP3.44□□□□□ -1.86
VPS13D-206ENST00000476045 SNRNP70P08621 437 aaKnown RBP3.44□□□□□ -1.86
VPS13D-206ENST00000476045 FBP1P09467 338 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 IGHV4-38-2P0DP08 117 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 DTYMKP23919 212 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 PPIFP30405 207 aaKnown RBP3.44□□□□□ -1.86
VPS13D-206ENST00000476045 KCNJ3P48549 501 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 CAMLGP49069 296 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 RBP2P50120 134 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 PPT1P50897 306 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 CAV2P51636 162 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 FUT6P51993 359 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 F2RL1P55085 397 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 FGF12P61328 243 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 FAM3AP98173 230 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 FHL3Q13643 280 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 PEA15Q15121 130 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 OR8B8Q15620 311 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 LRRC10Q5BKY1 277 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 C10orf91Q5T1B1 145 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 TMEM268Q5VZI3 342 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 DGAT2L7PQ6IED9 249 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 Q6ZSR3 168 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 SLC25A26Q70HW3 274 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 IQCF2Q8IXL9 164 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 LINC00518Q8N0U6 118 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 LGI3Q8N145 548 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 HSD17B11Q8NBQ5 300 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 OR52M1Q8NGK5 317 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 OR5R1Q8NH85 324 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 C8orf46Q8TAG6 207 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 RXFP4Q8TDU9 374 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 C2CD4CQ8TF44 421 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 SECTM1Q8WVN6 248 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 RTN4IP1Q8WWV3 396 aaPredicted RBP3.44□□□□□ -1.86
VPS13D-206ENST00000476045 SLAMF9Q96A28 289 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 C10orf35Q96D05 121 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 AKR1E2Q96JD6 320 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 SMIM8Q96KF7 97 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 SEC11CQ9BY50 192 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 RPS10P5Q9NQ39 176 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 C19orf12Q9NSK7 152 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 ZFP57Q9NU63 452 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 DCAF16Q9NXF7 216 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 ST3GAL6Q9Y274 331 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 KCNIP3Q9Y2W7 256 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 NSG2Q9Y328 171 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 MPC1Q9Y5U8 109 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 RFNGQ9Y644 331 aa3.44□□□□□ -1.86
VPS13D-206ENST00000476045 PLXNB1O43157 2135 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 IGHV1-69DA0A0B4J2H0 117 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 ZNF816-ZNF321PA0A0X1KG74 233 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 IGSF23A1L1A6 192 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 OR5B21A6NL26 309 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 TRDCB7Z8K6 153 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 M0R036 132 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 M0R1W7 72 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 HSPB6O14558 160 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 JTBO76095 146 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 OR7C1O76099 320 aaPredicted RBP3.43□□□□□ -1.86
VPS13D-206ENST00000476045 NXPH3O95157 252 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 IGHV1-69P01742 117 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 PRH1P02810 166 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 GAPDHP04406 335 aaKnown RBP3.43□□□□□ -1.86
VPS13D-206ENST00000476045 GLAP06280 429 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 MMP9P14780 707 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 BCL3P20749 454 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 CA6P23280 308 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 DUSP1P28562 367 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 PPP1CCP36873 323 aaKnown RBP3.43□□□□□ -1.86
VPS13D-206ENST00000476045 NPBWR2P48146 333 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 SSBP2P81877 361 aaPredicted RBP3.43□□□□□ -1.86
VPS13D-206ENST00000476045 ZNF616Q08AN1 781 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 PRDX4Q13162 271 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 CLINT1Q14677 625 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 GUK1Q16774 197 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 SMIM21Q3B7S5 101 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 MIDNQ504T8 468 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 SPRNQ5BIV9 151 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 IGSF11Q5DX21 431 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 SPIN3Q5JUX0 258 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 PRAMEF6Q5VXH4 476 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 STUMQ69YW2 141 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 DHRS11Q6UWP2 260 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 ASCL4Q6XD76 172 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 ZNF841Q6ZN19 808 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 TMEM182Q6ZP80 229 aaPredicted RBP3.43□□□□□ -1.86
VPS13D-206ENST00000476045 ZDHHC23Q8IYP9 409 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 GCSAMQ8N6F7 178 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 ZNF565Q8N9K5 539 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 CCDC71LQ8N9Z2 235 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 SCCPDHQ8NBX0 429 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 DMBX1Q8NFW5 382 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 OR5D13Q8NGL4 314 aa3.43□□□□□ -1.86
VPS13D-206ENST00000476045 FAM213BQ8TBF2 198 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms