RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 SCCPDHQ8NBX0 429 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 OR1L1Q8NH94 360 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 UBALD1Q8TB05 177 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 C18orf32Q8TCD1 76 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 FAM222BQ8WU58 562 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 BLNKQ8WV28 456 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 PATE1Q8WXA2 126 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 TSACCQ96A04 125 aaPredicted RBP3.56□□□□□ -1.84
VPS50-210ENST00000471188 TMEM147Q9BVK8 224 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 SS18L2Q9UHA2 77 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 USF3Q68DE3 2245 aa3.56□□□□□ -1.84
VPS50-210ENST00000471188 TRAV9-1A0A075B6T8 112 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 SAA2-SAA4A0A096LPE2 208 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 A6NDN8 102 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 J3QR06 171 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 K7EN84 100 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 CLDN14O95500 239 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 CA1P00915 261 aaPredicted RBP3.55□□□□□ -1.84
VPS50-210ENST00000471188 ARL14EPLP0DKL9 152 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 DRD1P21728 446 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 GNG4P50150 75 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 GPM6AP51674 278 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 PPP1CAP62136 330 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 C17orf67Q0P5P2 114 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 PDLIM3Q53GG5 364 aaPredicted RBP3.55□□□□□ -1.84
VPS50-210ENST00000471188 TMEM136Q6ZRR5 245 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 BHLHA15Q7RTS1 189 aaPredicted RBP3.55□□□□□ -1.84
VPS50-210ENST00000471188 UBALD2Q8IYN6 164 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 MRPL43Q8N983 215 aaKnown RBP3.55□□□□□ -1.84
VPS50-210ENST00000471188 NPCDR1Q9BY65 106 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 NPFFR1Q9GZQ6 430 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 OR2D2Q9H210 308 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 KCNIP1Q9NZI2 227 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 OR1A1Q9P1Q5 309 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 DEC1Q9P2X7 70 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 PSG11Q9UQ72 335 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 TIMM9Q9Y5J7 89 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 K7EP34 96 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 M0R135 149 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 TUSC2O75896 110 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 LEPROTL1O95214 131 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 CNIH1O95406 144 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 IGHMP01871 453 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 AMY1AP04745 511 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 CRYBB3P26998 211 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 MFAP2P55001 183 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 TIGITQ495A1 244 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 TMEM97Q5BJF2 176 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 TMEM211Q6ICI0 200 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 DHRS13Q6UX07 377 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 PQLC2Q6ZP29 291 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 OR5A2Q8NGI9 324 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 SSC4DQ8WTU2 575 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 PIGCQ92535 297 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 TMEM45BQ96B21 275 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 ZNF799Q96GE5 643 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 JMJD8Q96S16 334 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 SSBP3Q9BWW4 388 aaPredicted RBP3.55□□□□□ -1.84
VPS50-210ENST00000471188 COMMD5Q9GZQ3 224 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 DEPPQ9NTK1 212 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 SPEGQ15772 3267 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 ATG2AQ2TAZ0 1938 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 DYSFO75923 2080 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 C9orf118A6NHY6 69 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 REG1AP05451 166 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 SRFP11831 508 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 FABP2P12104 132 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 ARL4DP49703 201 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 FOXA3P55318 350 aaPredicted RBP3.55□□□□□ -1.84
VPS50-210ENST00000471188 CX3CL1P78423 397 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 CD300EQ496F6 205 aaPredicted RBP3.55□□□□□ -1.84
VPS50-210ENST00000471188 ASPHD1Q5U4P2 390 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 CRIP3Q6Q6R5 217 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 TCF24Q7RTU0 167 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 NEGR1Q7Z3B1 354 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 SPATA12Q7Z6I5 190 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 ELSPBP1Q96BH3 223 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 EAF1Q96JC9 268 aaPredicted RBP3.55□□□□□ -1.84
VPS50-210ENST00000471188 SSBP4Q9BWG4 385 aaPredicted RBP3.55□□□□□ -1.84
VPS50-210ENST00000471188 PHF7Q9BWX1 381 aaPredicted RBP3.55□□□□□ -1.84
VPS50-210ENST00000471188 PRO3102Q9H379 93 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 UBE2ZQ9H832 354 aaPredicted RBP3.55□□□□□ -1.84
VPS50-210ENST00000471188 SAP30LQ9HAJ7 183 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 ATP23Q9Y6H3 246 aa3.55□□□□□ -1.84
VPS50-210ENST00000471188 IGKV1-27A0A075B6S5 117 aa3.54□□□□□ -1.84
VPS50-210ENST00000471188 IGKV1-12A0A0C4DH73 117 aa3.54□□□□□ -1.84
VPS50-210ENST00000471188 A0A1W2PQU0 124 aa3.54□□□□□ -1.84
VPS50-210ENST00000471188 IGKV1D-12P01611 117 aa3.54□□□□□ -1.84
VPS50-210ENST00000471188 FTH1P19P0C7X4 201 aa3.54□□□□□ -1.84
VPS50-210ENST00000471188 SMIM17P0DL12 118 aa3.54□□□□□ -1.84
VPS50-210ENST00000471188 CCL1P22362 96 aa3.54□□□□□ -1.84
VPS50-210ENST00000471188 OR1D5P58170 312 aa3.54□□□□□ -1.84
VPS50-210ENST00000471188 SEC11AP67812 179 aa3.54□□□□□ -1.84
VPS50-210ENST00000471188 KIR3DS1Q14943 382 aa3.54□□□□□ -1.84
VPS50-210ENST00000471188 COX19Q49B96 90 aa3.54□□□□□ -1.84
VPS50-210ENST00000471188 TM4SF20Q53R12 229 aa3.54□□□□□ -1.84
VPS50-210ENST00000471188 CENPWQ5EE01 88 aa3.54□□□□□ -1.84
VPS50-210ENST00000471188 CCDC144NLQ6NUI1 221 aa3.54□□□□□ -1.84
VPS50-210ENST00000471188 UFSP1Q6NVU6 142 aa3.54□□□□□ -1.84
VPS50-210ENST00000471188 Q6ZPA2 131 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms