RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 CD81P60033 236 aa13.35□□□□□ -0.27
COL7A1-206ENST00000466591 HERV-K104P61576 105 aa13.35□□□□□ -0.27
COL7A1-206ENST00000466591 Q8N1Y9 231 aa13.35□□□□□ -0.27
COL7A1-206ENST00000466591 OR2K2Q8NGT1 345 aa13.35□□□□□ -0.27
COL7A1-206ENST00000466591 SLC5A7Q9GZV3 580 aa13.35□□□□□ -0.27
COL7A1-206ENST00000466591 NBEAL2Q6ZNJ1 2754 aa13.35□□□□□ -0.27
COL7A1-206ENST00000466591 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.34□□□□□ -0.27
COL7A1-206ENST00000466591 PPP5D1E7EU14 171 aa13.34□□□□□ -0.27
COL7A1-206ENST00000466591 BMPR1BO00238 502 aa13.34□□□□□ -0.27
COL7A1-206ENST00000466591 SSX5O60225 188 aa13.34□□□□□ -0.27
COL7A1-206ENST00000466591 GGCTO75223 188 aaKnown RBP13.34□□□□□ -0.27
COL7A1-206ENST00000466591 CLEC2LP0C7M8 214 aa13.34□□□□□ -0.27
COL7A1-206ENST00000466591 RPL8P62917 257 aaKnown RBP13.34□□□□□ -0.27
COL7A1-206ENST00000466591 ZNF45Q02386 682 aa13.34□□□□□ -0.27
COL7A1-206ENST00000466591 MRGPRG-AS1Q2M3A8 158 aa13.34□□□□□ -0.27
COL7A1-206ENST00000466591 TIMM50Q3ZCQ8 353 aa13.34□□□□□ -0.27
COL7A1-206ENST00000466591 ZFAND6Q6FIF0 208 aa13.34□□□□□ -0.27
COL7A1-206ENST00000466591 SPAG16Q8N0X2 631 aa13.34□□□□□ -0.27
COL7A1-206ENST00000466591 EEF1AKMT3Q96AZ1 226 aa13.34□□□□□ -0.27
COL7A1-206ENST00000466591 CITED4Q96RK1 184 aa13.34□□□□□ -0.27
COL7A1-206ENST00000466591 TM2D3Q9BRN9 247 aa13.34□□□□□ -0.27
COL7A1-206ENST00000466591 VCX3AQ9NNX9 186 aa13.34□□□□□ -0.27
COL7A1-206ENST00000466591 CCL28Q9NRJ3 127 aa13.34□□□□□ -0.27
COL7A1-206ENST00000466591 SIGLEC8Q9NYZ4 499 aa13.34□□□□□ -0.27
COL7A1-206ENST00000466591 A0A0A6YYH2 397 aa13.33□□□□□ -0.28
COL7A1-206ENST00000466591 ZNF320A2RRD8 509 aa13.33□□□□□ -0.28
COL7A1-206ENST00000466591 A6NJ64 397 aa13.33□□□□□ -0.28
COL7A1-206ENST00000466591 CYB5BO43169 146 aa13.33□□□□□ -0.28
COL7A1-206ENST00000466591 IGHV3-23P01764 117 aa13.33□□□□□ -0.28
COL7A1-206ENST00000466591 ARL3P36405 182 aa13.33□□□□□ -0.28
COL7A1-206ENST00000466591 CBX5P45973 191 aa13.33□□□□□ -0.28
COL7A1-206ENST00000466591 TMEM17Q86X19 198 aa13.33□□□□□ -0.28
COL7A1-206ENST00000466591 GVQW1Q8N7I0 195 aa13.33□□□□□ -0.28
COL7A1-206ENST00000466591 ZBTB34Q8NCN2 500 aa13.33□□□□□ -0.28
COL7A1-206ENST00000466591 DMBX1Q8NFW5 382 aa13.33□□□□□ -0.28
COL7A1-206ENST00000466591 OR5H6Q8NGV6 325 aa13.33□□□□□ -0.28
COL7A1-206ENST00000466591 TMEM167AQ8TBQ9 72 aa13.33□□□□□ -0.28
COL7A1-206ENST00000466591 BORCS5Q969J3 196 aa13.33□□□□□ -0.28
COL7A1-206ENST00000466591 GPHA2Q96T91 129 aa13.33□□□□□ -0.28
COL7A1-206ENST00000466591 PLEKHA3Q9HB20 300 aa13.33□□□□□ -0.28
COL7A1-206ENST00000466591 C19orf73Q9NVV2 129 aa13.33□□□□□ -0.28
COL7A1-206ENST00000466591 TRBV9A0A0B4J1U6 114 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 NPIPB5A8MRT5 1133 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 A8MZ25 164 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 SULT1C2O00338 296 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 RBMXL2O75526 392 aaKnown RBP13.32□□□□□ -0.28
COL7A1-206ENST00000466591 PPYP01298 95 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 HIST1H1BP16401 226 aaKnown RBP13.32□□□□□ -0.28
COL7A1-206ENST00000466591 HLA-GP17693 338 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 ERVK-16P61578 105 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 CD300EQ496F6 205 aaPredicted RBP13.32□□□□□ -0.28
COL7A1-206ENST00000466591 FAM106AQ4KMX7 169 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 AADACL3Q5VUY0 350 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 CLEC19AQ6UXS0 136 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 IL34Q6ZMJ4 242 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 HOGA1Q86XE5 327 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 TSPAN14Q8NG11 270 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 OR4A5Q8NH83 315 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 S100A16Q96FQ6 103 aaKnown RBP13.32□□□□□ -0.28
COL7A1-206ENST00000466591 NEURL2Q9BR09 285 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 COMMD5Q9GZQ3 224 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 RNF167Q9H6Y7 350 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 SLC2A9Q9NRM0 540 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 S4R3C0 116 aa13.32□□□□□ -0.28
COL7A1-206ENST00000466591 KMT2CQ8NEZ4 4911 aaKnown RBP13.32□□□□□ -0.28
COL7A1-206ENST00000466591 IZUMO1RA6ND01 250 aa13.31□□□□□ -0.28
COL7A1-206ENST00000466591 MEIS3P1A6NDR6 274 aa13.31□□□□□ -0.28
COL7A1-206ENST00000466591 OR2C1O95371 312 aa13.31□□□□□ -0.28
COL7A1-206ENST00000466591 IGLV2-14P01704 120 aa13.31□□□□□ -0.28
COL7A1-206ENST00000466591 HLA-AP01891 365 aaKnown RBP13.31□□□□□ -0.28
COL7A1-206ENST00000466591 REG1AP05451 166 aa13.31□□□□□ -0.28
COL7A1-206ENST00000466591 PTHLHP12272 177 aa13.31□□□□□ -0.28
COL7A1-206ENST00000466591 PSMB6P28072 239 aa13.31□□□□□ -0.28
COL7A1-206ENST00000466591 HAGHQ16775 308 aa13.31□□□□□ -0.28
COL7A1-206ENST00000466591 CROCCP3Q8IVE0 287 aa13.31□□□□□ -0.28
COL7A1-206ENST00000466591 LAX1Q8IWV1 398 aa13.31□□□□□ -0.28
COL7A1-206ENST00000466591 PUSL1Q8N0Z8 303 aaKnown RBP13.31□□□□□ -0.28
COL7A1-206ENST00000466591 OR51H1Q8NH63 302 aa13.31□□□□□ -0.28
COL7A1-206ENST00000466591 CEPT1Q9Y6K0 416 aa13.31□□□□□ -0.28
COL7A1-206ENST00000466591 TEX22C9J3V5 150 aa13.3□□□□□ -0.28
COL7A1-206ENST00000466591 MSMO1Q15800 293 aa13.3□□□□□ -0.28
COL7A1-206ENST00000466591 OR4A47Q6IF82 309 aa13.3□□□□□ -0.28
COL7A1-206ENST00000466591 SLC16A13Q7RTY0 426 aa13.3□□□□□ -0.28
COL7A1-206ENST00000466591 CD300LFQ8TDQ1 290 aa13.3□□□□□ -0.28
COL7A1-206ENST00000466591 SLC25A38Q96DW6 304 aa13.3□□□□□ -0.28
COL7A1-206ENST00000466591 CXorf58Q96LI9 332 aa13.3□□□□□ -0.28
COL7A1-206ENST00000466591 AUNIPQ9H7T9 357 aa13.3□□□□□ -0.28
COL7A1-206ENST00000466591 EHFQ9NZC4 300 aa13.3□□□□□ -0.28
COL7A1-206ENST00000466591 THYN1Q9P016 225 aa13.3□□□□□ -0.28
COL7A1-206ENST00000466591 NDUFB8O95169 186 aa13.29□□□□□ -0.28
COL7A1-206ENST00000466591 HPRT1P00492 218 aa13.29□□□□□ -0.28
COL7A1-206ENST00000466591 IL6RP08887 468 aaPredicted RBP13.29□□□□□ -0.28
COL7A1-206ENST00000466591 ZNF735P0CB33 412 aa13.29□□□□□ -0.28
COL7A1-206ENST00000466591 FOLR2P14207 255 aa13.29□□□□□ -0.28
COL7A1-206ENST00000466591 AREGP15514 252 aa13.29□□□□□ -0.28
COL7A1-206ENST00000466591 NQO2P16083 231 aa13.29□□□□□ -0.28
COL7A1-206ENST00000466591 TAS2R31P59538 309 aa13.29□□□□□ -0.28
COL7A1-206ENST00000466591 TMEM69Q5SWH9 247 aa13.29□□□□□ -0.28
COL7A1-206ENST00000466591 C19orf35Q6ZS72 473 aa13.29□□□□□ -0.28
COL7A1-206ENST00000466591 OR5AP2Q8NGF4 316 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms