RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 SELENOVP59797 346 aa15.14■□□□□ 0.01
SYNE4-204ENST00000465425 ABHD12Q8N2K0 398 aa15.14■□□□□ 0.01
SYNE4-204ENST00000465425 SDSLQ96GA7 329 aa15.14■□□□□ 0.01
SYNE4-204ENST00000465425 TCF19Q9Y242 345 aa15.14■□□□□ 0.01
SYNE4-204ENST00000465425 GALR2O43603 387 aaPredicted RBP15.13■□□□□ 0.01
SYNE4-204ENST00000465425 SELLP14151 372 aa15.13■□□□□ 0.01
SYNE4-204ENST00000465425 FAM201AQ5SY85 155 aa15.13■□□□□ 0.01
SYNE4-204ENST00000465425 ELOVL1Q9BW60 279 aa15.13■□□□□ 0.01
SYNE4-204ENST00000465425 MS4A5Q9H3V2 200 aa15.13■□□□□ 0.01
SYNE4-204ENST00000465425 BOD1L1Q8NFC6 3051 aa15.13■□□□□ 0.01
SYNE4-204ENST00000465425 RD3LP0DJH9 198 aa15.12■□□□□ 0.01
SYNE4-204ENST00000465425 CLEC12BQ2HXU8 276 aa15.12■□□□□ 0.01
SYNE4-204ENST00000465425 TMEM249Q2WGJ8 235 aa15.12■□□□□ 0.01
SYNE4-204ENST00000465425 RHOVQ96L33 236 aa15.12■□□□□ 0.01
SYNE4-204ENST00000465425 KCNIP2Q9NS61 270 aa15.12■□□□□ 0.01
SYNE4-204ENST00000465425 GFOD1Q9NXC2 390 aa15.12■□□□□ 0.01
SYNE4-204ENST00000465425 PXMP4Q9Y6I8 212 aa15.12■□□□□ 0.01
SYNE4-204ENST00000465425 HCFC1P51610 2035 aa15.12■□□□□ 0.01
SYNE4-204ENST00000465425 TRGV10A0A0A0MS01 117 aa15.12■□□□□ 0.01
SYNE4-204ENST00000465425 TRGV8A0A0C4DH27 118 aa15.12■□□□□ 0.01
SYNE4-204ENST00000465425 TMPRSS3P57727 454 aa15.12■□□□□ 0.01
SYNE4-204ENST00000465425 FAM3BP58499 235 aaPredicted RBP15.12■□□□□ 0.01
SYNE4-204ENST00000465425 RPRMLQ8N4K4 120 aa15.12■□□□□ 0.01
SYNE4-204ENST00000465425 ZNF383Q8NA42 475 aa15.12■□□□□ 0.01
SYNE4-204ENST00000465425 DDB2Q92466 427 aa15.12■□□□□ 0.01
SYNE4-204ENST00000465425 MGST2Q99735 147 aa15.12■□□□□ 0.01
SYNE4-204ENST00000465425 PCGF1Q9BSM1 259 aa15.12■□□□□ 0.01
SYNE4-204ENST00000465425 IGLV3-9A0A075B6K5 115 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 SAA2-SAA4A0A096LPE2 208 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 KBTBD11-OT1A0A1B0GTJ5 212 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 C15orf61A6NNL5 157 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 ITGB1BP1O14713 200 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 SAA2P0DJI9 122 aaPredicted RBP15.11■□□□□ 0.01
SYNE4-204ENST00000465425 NPPCP23582 126 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 ATP5G3P48201 142 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 C17orf58Q2M2W7 97 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 CT45A1Q5HYN5 189 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 MIC13Q5XKP0 118 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 KCNIP4Q6PIL6 250 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 CT45A3Q8NHU0 189 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 PACRGQ96M98 296 aaPredicted RBP15.11■□□□□ 0.01
SYNE4-204ENST00000465425 GGTLC1Q9BX51 225 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 NPVFQ9HCQ7 196 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 ENY2Q9NPA8 101 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 RNF7Q9UBF6 113 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 FAM215AQ9Y5M1 114 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 CADP27708 2225 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 PRSS46E5RG02 174 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 ARL14EPLP0DKL9 152 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 SRP14P37108 136 aaKnown RBP15.11■□□□□ 0.01
SYNE4-204ENST00000465425 IGF2-ASQ6U949 168 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.11■□□□□ 0.01
SYNE4-204ENST00000465425 OR2T10Q8NGZ9 312 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 NCOR1P1Q9H4R4 102 aa15.11■□□□□ 0.01
SYNE4-204ENST00000465425 F6UZH7 168 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 NDUFB4O95168 129 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 CGB3P0DN86 165 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 CGB7P0DN87 165 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 GNB1P62873 340 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 C3orf36Q3SXR2 165 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 CDPF1Q6NVV7 123 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 C1orf229Q6ZS94 237 aaPredicted RBP15.1■□□□□ 0.01
SYNE4-204ENST00000465425 TMEM183AQ8IXX5 376 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 LYG1Q8N1E2 194 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 OTOGLQ3ZCN5 2332 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 CXorf1O96002 111 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 GATA4P43694 442 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 THBS3P49746 956 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 TNFAIP6P98066 277 aaPredicted RBP15.1■□□□□ 0.01
SYNE4-204ENST00000465425 FAM209BQ5JX69 171 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 UTF1Q5T230 341 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 C1orf185Q5T7R7 199 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 OR4A47Q6IF82 309 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 LINC01551Q86U37 167 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 GCM1Q9NP62 436 aa15.1■□□□□ 0.01
SYNE4-204ENST00000465425 TRBV23-1A0A0A0MS06 115 aa15.09■□□□□ 0.01
SYNE4-204ENST00000465425 NPY1RP25929 384 aa15.09■□□□□ 0.01
SYNE4-204ENST00000465425 CHRNA7P36544 502 aa15.09■□□□□ 0.01
SYNE4-204ENST00000465425 MRPS11P82912 194 aaKnown RBP15.09■□□□□ 0.01
SYNE4-204ENST00000465425 IGFL3Q6UXB1 125 aa15.09■□□□□ 0.01
SYNE4-204ENST00000465425 DEFB108BQ8NET1 73 aa15.09■□□□□ 0.01
SYNE4-204ENST00000465425 SLC24A4Q8NFF2 622 aa15.09■□□□□ 0.01
SYNE4-204ENST00000465425 SSMEM1Q8WWF3 244 aa15.09■□□□□ 0.01
SYNE4-204ENST00000465425 HIST1H2BLQ99880 126 aa15.09■□□□□ 0.01
SYNE4-204ENST00000465425 TXNDC17Q9BRA2 123 aa15.09■□□□□ 0.01
SYNE4-204ENST00000465425 STAG3L2P0CL84 134 aa15.09■□□□□ 0.01
SYNE4-204ENST00000465425 STAG3L3P0CL85 134 aa15.09■□□□□ 0.01
SYNE4-204ENST00000465425 TEPPQ6URK8 271 aa15.09■□□□□ 0.01
SYNE4-204ENST00000465425 FAM222BQ8WU58 562 aa15.09■□□□□ 0.01
SYNE4-204ENST00000465425 TMEM170AQ8WVE7 144 aa15.09■□□□□ 0.01
SYNE4-204ENST00000465425 ADTRPQ96IZ2 230 aa15.09■□□□□ 0.01
SYNE4-204ENST00000465425 IL19Q9UHD0 177 aa15.09■□□□□ 0.01
SYNE4-204ENST00000465425 FOXA2Q9Y261 457 aaPredicted RBP15.09■□□□□ 0.01
SYNE4-204ENST00000465425 TMPRSS2O15393 492 aa15.08■□□□□ 0
SYNE4-204ENST00000465425 GGCTO75223 188 aaKnown RBP15.08■□□□□ 0
SYNE4-204ENST00000465425 HIST1H1BP16401 226 aaKnown RBP15.08■□□□□ 0
SYNE4-204ENST00000465425 TNFSF4P23510 183 aa15.08■□□□□ 0
SYNE4-204ENST00000465425 HSPE1P61604 102 aaKnown RBP15.08■□□□□ 0
SYNE4-204ENST00000465425 RAB31Q13636 194 aa15.08■□□□□ 0
SYNE4-204ENST00000465425 DUX4L9Q6RFH8 374 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms