RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 MAS1LP35410 378 aa14.44□□□□□ -0.1
VARS-220ENST00000461874 RPS19P39019 145 aaKnown RBP14.44□□□□□ -0.1
VARS-220ENST00000461874 EXOSC2Q13868 293 aaKnown RBP14.44□□□□□ -0.1
VARS-220ENST00000461874 OR5AP2Q8NGF4 316 aa14.44□□□□□ -0.1
VARS-220ENST00000461874 YIPF6Q96EC8 236 aa14.44□□□□□ -0.1
VARS-220ENST00000461874 S100A16Q96FQ6 103 aaKnown RBP14.44□□□□□ -0.1
VARS-220ENST00000461874 SLC5A7Q9GZV3 580 aa14.44□□□□□ -0.1
VARS-220ENST00000461874 SIGLEC8Q9NYZ4 499 aa14.44□□□□□ -0.1
VARS-220ENST00000461874 ZNF257Q9Y2Q1 563 aa14.44□□□□□ -0.1
VARS-220ENST00000461874 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.43□□□□□ -0.1
VARS-220ENST00000461874 E7EUB6 86 aa14.43□□□□□ -0.1
VARS-220ENST00000461874 H0Y980 276 aa14.43□□□□□ -0.1
VARS-220ENST00000461874 BMPR1BO00238 502 aa14.43□□□□□ -0.1
VARS-220ENST00000461874 ZNF735P0CB33 412 aa14.43□□□□□ -0.1
VARS-220ENST00000461874 RPL27AP46776 148 aaKnown RBP14.43□□□□□ -0.1
VARS-220ENST00000461874 GIMAP1Q8WWP7 306 aa14.43□□□□□ -0.1
VARS-220ENST00000461874 SLC2A9Q9NRM0 540 aa14.43□□□□□ -0.1
VARS-220ENST00000461874 A0A087WXM4 84 aa14.42□□□□□ -0.1
VARS-220ENST00000461874 A0A1B0GW64 132 aa14.42□□□□□ -0.1
VARS-220ENST00000461874 NPIPB5A8MRT5 1133 aa14.42□□□□□ -0.1
VARS-220ENST00000461874 OR2J3O76001 311 aa14.42□□□□□ -0.1
VARS-220ENST00000461874 IGHV4-30-4P0DP06 118 aa14.42□□□□□ -0.1
VARS-220ENST00000461874 C15orf32Q32M92 178 aa14.42□□□□□ -0.1
VARS-220ENST00000461874 UBE2NLQ5JXB2 153 aa14.42□□□□□ -0.1
VARS-220ENST00000461874 SSX9Q7RTT3 188 aa14.42□□□□□ -0.1
VARS-220ENST00000461874 SPAG16Q8N0X2 631 aa14.42□□□□□ -0.1
VARS-220ENST00000461874 TSPAN14Q8NG11 270 aa14.42□□□□□ -0.1
VARS-220ENST00000461874 RCHY1Q96PM5 261 aa14.42□□□□□ -0.1
VARS-220ENST00000461874 FYTTD1Q96QD9 318 aaKnown RBP14.42□□□□□ -0.1
VARS-220ENST00000461874 VCX3AQ9NNX9 186 aa14.42□□□□□ -0.1
VARS-220ENST00000461874 MEIS3P1A6NDR6 274 aa14.41□□□□□ -0.1
VARS-220ENST00000461874 A8MZ25 164 aa14.41□□□□□ -0.1
VARS-220ENST00000461874 SULT1C2O00338 296 aa14.41□□□□□ -0.1
VARS-220ENST00000461874 RBFOX2O43251 390 aaKnown RBP eCLIP14.41□□□□□ -0.1
VARS-220ENST00000461874 FXYD4P59646 89 aa14.41□□□□□ -0.1
VARS-220ENST00000461874 LSM3P62310 102 aaKnown RBP14.41□□□□□ -0.1
VARS-220ENST00000461874 RPL8P62917 257 aaKnown RBP14.41□□□□□ -0.1
VARS-220ENST00000461874 FAM209BQ5JX69 171 aa14.41□□□□□ -0.1
VARS-220ENST00000461874 C19orf35Q6ZS72 473 aa14.41□□□□□ -0.1
VARS-220ENST00000461874 OR4A5Q8NH83 315 aa14.41□□□□□ -0.1
VARS-220ENST00000461874 AIFM2Q9BRQ8 373 aa14.41□□□□□ -0.1
VARS-220ENST00000461874 C19orf73Q9NVV2 129 aa14.41□□□□□ -0.1
VARS-220ENST00000461874 BET1LQ9NYM9 111 aa14.41□□□□□ -0.1
VARS-220ENST00000461874 PEMTQ9UBM1 199 aa14.41□□□□□ -0.1
VARS-220ENST00000461874 DPPA5A6NC42 116 aa14.4□□□□□ -0.1
VARS-220ENST00000461874 TNFAIP8O95379 198 aa14.4□□□□□ -0.1
VARS-220ENST00000461874 CRYGCP07315 174 aa14.4□□□□□ -0.1
VARS-220ENST00000461874 AREGP15514 252 aa14.4□□□□□ -0.1
VARS-220ENST00000461874 HLA-GP17693 338 aa14.4□□□□□ -0.1
VARS-220ENST00000461874 MECP2P51608 486 aaKnown RBP14.4□□□□□ -0.1
VARS-220ENST00000461874 CATR1Q13166 79 aa14.4□□□□□ -0.1
VARS-220ENST00000461874 OR4A47Q6IF82 309 aa14.4□□□□□ -0.1
VARS-220ENST00000461874 ZNF818PQ6ZRF7 136 aa14.4□□□□□ -0.1
VARS-220ENST00000461874 SGPP2Q8IWX5 399 aa14.4□□□□□ -0.1
VARS-220ENST00000461874 SAMD12Q8N8I0 201 aa14.4□□□□□ -0.1
VARS-220ENST00000461874 FANCD2OSQ96PS1 177 aa14.4□□□□□ -0.1
VARS-220ENST00000461874 IFT46Q9NQC8 304 aa14.4□□□□□ -0.1
VARS-220ENST00000461874 FBXL7Q9UJT9 491 aa14.4□□□□□ -0.1
VARS-220ENST00000461874 ANAPC10Q9UM13 185 aa14.4□□□□□ -0.1
VARS-220ENST00000461874 DMRT1Q9Y5R6 373 aa14.4□□□□□ -0.1
VARS-220ENST00000461874 MYOD1P15172 320 aa14.39□□□□□ -0.11
VARS-220ENST00000461874 PSMB6P28072 239 aa14.39□□□□□ -0.11
VARS-220ENST00000461874 TAS2R31P59538 309 aa14.39□□□□□ -0.11
VARS-220ENST00000461874 TAS2R20P59543 309 aa14.39□□□□□ -0.11
VARS-220ENST00000461874 POU2AF1Q16633 256 aa14.39□□□□□ -0.11
VARS-220ENST00000461874 KLK9Q2XQG4 91 aa14.39□□□□□ -0.11
VARS-220ENST00000461874 TMEM69Q5SWH9 247 aa14.39□□□□□ -0.11
VARS-220ENST00000461874 LCN12Q6JVE5 192 aa14.39□□□□□ -0.11
VARS-220ENST00000461874 DHRS11Q6UWP2 260 aa14.39□□□□□ -0.11
VARS-220ENST00000461874 TMEM17Q86X19 198 aa14.39□□□□□ -0.11
VARS-220ENST00000461874 Q8N402 240 aa14.39□□□□□ -0.11
VARS-220ENST00000461874 THAP7Q9BT49 309 aaPredicted RBP14.39□□□□□ -0.11
VARS-220ENST00000461874 ZMAT4Q9H898 229 aa14.39□□□□□ -0.11
VARS-220ENST00000461874 EHFQ9NZC4 300 aa14.39□□□□□ -0.11
VARS-220ENST00000461874 KLK9Q9UKQ9 250 aa14.39□□□□□ -0.11
VARS-220ENST00000461874 DNAH7Q8WXX0 4024 aa14.38□□□□□ -0.11
VARS-220ENST00000461874 CGB1A6NKQ9 187 aa14.38□□□□□ -0.11
VARS-220ENST00000461874 PPP5D1E7EU14 171 aa14.38□□□□□ -0.11
VARS-220ENST00000461874 C3orf84H3BNL1 204 aa14.38□□□□□ -0.11
VARS-220ENST00000461874 HPRT1P00492 218 aa14.38□□□□□ -0.11
VARS-220ENST00000461874 NQO2P16083 231 aa14.38□□□□□ -0.11
VARS-220ENST00000461874 CTRB1P17538 263 aa14.38□□□□□ -0.11
VARS-220ENST00000461874 GNRHRP30968 328 aa14.38□□□□□ -0.11
VARS-220ENST00000461874 RFX2P48378 723 aa14.38□□□□□ -0.11
VARS-220ENST00000461874 HERV-K104P61576 105 aa14.38□□□□□ -0.11
VARS-220ENST00000461874 CTRB2Q6GPI1 263 aa14.38□□□□□ -0.11
VARS-220ENST00000461874 KCTD12Q96CX2 325 aaKnown RBP14.38□□□□□ -0.11
VARS-220ENST00000461874 HRASLSQ9HDD0 168 aa14.38□□□□□ -0.11
VARS-220ENST00000461874 IZUMO1RA6ND01 250 aa14.37□□□□□ -0.11
VARS-220ENST00000461874 GGCTO75223 188 aaKnown RBP14.37□□□□□ -0.11
VARS-220ENST00000461874 NDUFB8O95169 186 aa14.37□□□□□ -0.11
VARS-220ENST00000461874 DHFRP00374 187 aa14.37□□□□□ -0.11
VARS-220ENST00000461874 NAT1P18440 290 aa14.37□□□□□ -0.11
VARS-220ENST00000461874 OR2B8PP59922 312 aa14.37□□□□□ -0.11
VARS-220ENST00000461874 AADACL3Q5VUY0 350 aa14.37□□□□□ -0.11
VARS-220ENST00000461874 ADAMTSL5Q6ZMM2 481 aa14.37□□□□□ -0.11
VARS-220ENST00000461874 OR2K2Q8NGT1 345 aa14.37□□□□□ -0.11
VARS-220ENST00000461874 OR51H1Q8NH63 302 aa14.37□□□□□ -0.11
VARS-220ENST00000461874 CD300LFQ8TDQ1 290 aa14.37□□□□□ -0.11
VARS-220ENST00000461874 BORCS5Q969J3 196 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms