RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 WBP1LQ9NX94 342 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 ELOVL5Q9NYP7 299 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 TBL2Q9Y4P3 447 aaKnown RBP7.68□□□□□ -1.18
BRCA1-205ENST00000461221 SIRT4Q9Y6E7 314 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-205ENST00000461221 SHROOM3Q8TF72 1996 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 APOMO95445 188 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 IFI6P09912 130 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 RIPPLY2Q5TAB7 128 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-205ENST00000461221 RPP21Q9H633 154 aaKnown RBP7.68□□□□□ -1.18
BRCA1-205ENST00000461221 NPDC1Q9NQX5 325 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-205ENST00000461221 FOXD3Q9UJU5 478 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-205ENST00000461221 SLC25A15Q9Y619 301 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 A0A1B0GUL6 1792 aa7.68□□□□□ -1.18
BRCA1-205ENST00000461221 PQLC2LA1A4F0 135 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 MOSP00540 346 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 IL11P20809 199 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 CBLN1P23435 193 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 LOXL4Q96JB6 756 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 DMRTA2Q96SC8 542 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 DERL1Q9BUN8 251 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 CLDN16Q9Y5I7 305 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 TRAV21A0A0B4J279 112 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 C1QAP02745 245 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 ZNF688P0C7X2 276 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 LIMS1P48059 325 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 PAX2Q02962 417 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 RTN4RL2Q86UN3 420 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 KLF14Q8TD94 323 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-205ENST00000461221 SSBP4Q9BWG4 385 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-205ENST00000461221 IFI27L2Q9H2X8 130 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 PEMTQ9UBM1 199 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 NRAPQ86VF7 1730 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 IGLV1-36A0A0B4J1U3 117 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 PEBP1P30086 187 aaKnown RBP7.67□□□□□ -1.18
BRCA1-205ENST00000461221 VKORC1L1Q8N0U8 176 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 OSR1Q8TAX0 266 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-205ENST00000461221 ITLN2Q8WWU7 325 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-205ENST00000461221 MYO9BQ13459 2157 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 NBEAP1P0C6P0 100 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 GZMMP51124 257 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 ZNF818PQ6ZRF7 136 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 POC1AQ8NBT0 407 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 LEPP41159 167 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 ORMDL3Q8N138 153 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 OR4X2Q8NGF9 303 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 FAM57AQ8TBR7 257 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 RNASEH2CQ8TDP1 164 aaKnown RBP7.67□□□□□ -1.18
BRCA1-205ENST00000461221 MARVELD3Q96A59 401 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 C5orf66Q9H5L9 145 aa7.67□□□□□ -1.18
BRCA1-205ENST00000461221 ZNF600Q6ZNG1 722 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 RFLNBQ8N5W9 214 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 TMEM52Q8NDY8 209 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 LINC01587Q99440 93 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 SLC17A3O00476 420 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 FOXA3P55318 350 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-205ENST00000461221 OR10J3Q5JRS4 329 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 PEAR1Q5VY43 1037 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-205ENST00000461221 DRAM1Q8N682 238 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 FER1L6-AS1Q8NA97 138 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 LAMB1P07942 1786 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 TRGV2A0A075B6R0 118 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 TRAV8-4A0A0B4J246 113 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 SPINT1O43278 529 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 IFI27P40305 119 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-205ENST00000461221 TMEM42Q69YG0 159 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 NPCDR1Q9BY65 106 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 IZUMO1RA6ND01 250 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 TM4SF5O14894 197 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 SNAI3Q3KNW1 292 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 FHL5Q5TD97 284 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 C1orf53Q5VUE5 145 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 SCARF2Q96GP6 870 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-205ENST00000461221 FBXL7Q9UJT9 491 aa7.66□□□□□ -1.18
BRCA1-205ENST00000461221 LOC390937A0A1W2PQ73 354 aa7.65□□□□□ -1.18
BRCA1-205ENST00000461221 ATXN7O15265 892 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-205ENST00000461221 NDUFA3O95167 84 aa7.65□□□□□ -1.18
BRCA1-205ENST00000461221 RNF182Q8N6D2 247 aa7.65□□□□□ -1.18
BRCA1-205ENST00000461221 WNT10AQ9GZT5 417 aa7.65□□□□□ -1.18
BRCA1-205ENST00000461221 PGPEP1LA6NFU8 196 aa7.65□□□□□ -1.18
BRCA1-205ENST00000461221 LHFPL6Q9Y693 200 aa7.65□□□□□ -1.18
BRCA1-205ENST00000461221 ZIC3O60481 467 aa7.65□□□□□ -1.18
BRCA1-205ENST00000461221 IGHMP01871 453 aa7.65□□□□□ -1.18
BRCA1-205ENST00000461221 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-205ENST00000461221 STPG1Q5TH74 334 aa7.65□□□□□ -1.18
BRCA1-205ENST00000461221 LEAP2Q969E1 77 aa7.65□□□□□ -1.18
BRCA1-205ENST00000461221 SLC25A38Q96DW6 304 aa7.65□□□□□ -1.18
BRCA1-205ENST00000461221 C14orf144Q96I85 54 aa7.65□□□□□ -1.18
BRCA1-205ENST00000461221 ST20Q9HBF5 79 aa7.65□□□□□ -1.18
BRCA1-205ENST00000461221 RGPD2P0DJD1 1756 aa7.65□□□□□ -1.18
BRCA1-205ENST00000461221 CDK2AP2O75956 126 aa7.65□□□□□ -1.19
BRCA1-205ENST00000461221 CD160O95971 181 aa7.65□□□□□ -1.19
BRCA1-205ENST00000461221 FAM71F2Q6NXP2 309 aa7.65□□□□□ -1.19
BRCA1-205ENST00000461221 PPP1R27Q86WC6 154 aa7.65□□□□□ -1.19
BRCA1-205ENST00000461221 ANAPC13Q9BS18 74 aa7.65□□□□□ -1.19
BRCA1-205ENST00000461221 SLC25A2Q9BXI2 301 aa7.65□□□□□ -1.19
BRCA1-205ENST00000461221 PLAC1Q9HBJ0 212 aa7.65□□□□□ -1.19
BRCA1-205ENST00000461221 NHLRC3Q5JS37 347 aa7.65□□□□□ -1.19
BRCA1-205ENST00000461221 DTX2Q86UW9 622 aa7.65□□□□□ -1.19
BRCA1-205ENST00000461221 GDF15Q99988 308 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms