RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 TCF23Q7RTU1 214 aa12.72□□□□□ -0.37
APP-208ENST00000439274 KCNIP2Q9NS61 270 aa12.72□□□□□ -0.37
APP-208ENST00000439274 PXMP4Q9Y6I8 212 aa12.72□□□□□ -0.37
APP-208ENST00000439274 SCO2A0A1W2PP80 73 aa12.72□□□□□ -0.37
APP-208ENST00000439274 TMPRSS2O15393 492 aa12.72□□□□□ -0.37
APP-208ENST00000439274 SLC31A2O15432 143 aa12.72□□□□□ -0.37
APP-208ENST00000439274 CNN1P51911 297 aaKnown RBP12.72□□□□□ -0.37
APP-208ENST00000439274 RPL15P61313 204 aaKnown RBP12.72□□□□□ -0.37
APP-208ENST00000439274 MSMPQ1L6U9 139 aa12.72□□□□□ -0.37
APP-208ENST00000439274 PDLIM3Q53GG5 364 aaPredicted RBP12.72□□□□□ -0.37
APP-208ENST00000439274 LRP11Q86VZ4 500 aa12.72□□□□□ -0.37
APP-208ENST00000439274 MRPL41Q8IXM3 137 aaKnown RBP12.72□□□□□ -0.37
APP-208ENST00000439274 ZNRF1Q8ND25 227 aa12.72□□□□□ -0.37
APP-208ENST00000439274 GGTLC1Q9BX51 225 aa12.72□□□□□ -0.37
APP-208ENST00000439274 BOD1L1Q8NFC6 3051 aa12.72□□□□□ -0.37
APP-208ENST00000439274 IGHV2OR16-5A0A0B4J2B6 119 aa12.71□□□□□ -0.37
APP-208ENST00000439274 IGHV1-18A0A0C4DH31 117 aa12.71□□□□□ -0.37
APP-208ENST00000439274 A8MWP6 167 aa12.71□□□□□ -0.37
APP-208ENST00000439274 PRSS46E5RG02 174 aa12.71□□□□□ -0.37
APP-208ENST00000439274 MKRN2OSH3BPM6 223 aa12.71□□□□□ -0.37
APP-208ENST00000439274 NKX2-8O15522 239 aa12.71□□□□□ -0.37
APP-208ENST00000439274 GFRA3O60609 400 aa12.71□□□□□ -0.37
APP-208ENST00000439274 RELBQ01201 579 aa12.71□□□□□ -0.37
APP-208ENST00000439274 SSX2Q16385 188 aa12.71□□□□□ -0.37
APP-208ENST00000439274 TMEM144Q7Z5S9 345 aa12.71□□□□□ -0.37
APP-208ENST00000439274 FAM90A1Q86YD7 464 aa12.71□□□□□ -0.37
APP-208ENST00000439274 RAB1CQ92928 201 aa12.71□□□□□ -0.37
APP-208ENST00000439274 C1orf159Q96HA4 380 aa12.71□□□□□ -0.37
APP-208ENST00000439274 TRAPPC1Q9Y5R8 145 aa12.71□□□□□ -0.37
APP-208ENST00000439274 OR4A8P0C604 315 aa12.71□□□□□ -0.37
APP-208ENST00000439274 NDUFB7P17568 137 aa12.71□□□□□ -0.37
APP-208ENST00000439274 OPRK1P41145 380 aa12.71□□□□□ -0.37
APP-208ENST00000439274 AARDQ4LEZ3 155 aa12.71□□□□□ -0.37
APP-208ENST00000439274 SPATA31B1PQ5VZV4 182 aa12.71□□□□□ -0.37
APP-208ENST00000439274 TMEM256Q8N2U0 113 aa12.71□□□□□ -0.37
APP-208ENST00000439274 SGMS2Q8NHU3 365 aa12.71□□□□□ -0.37
APP-208ENST00000439274 OPN3Q9H1Y3 402 aaPredicted RBP12.71□□□□□ -0.37
APP-208ENST00000439274 IFI27L2Q9H2X8 130 aa12.71□□□□□ -0.37
APP-208ENST00000439274 TMEM140Q9NV12 185 aa12.71□□□□□ -0.37
APP-208ENST00000439274 SVILO95425 2214 aa12.71□□□□□ -0.38
APP-208ENST00000439274 THBS3P49746 956 aa12.7□□□□□ -0.38
APP-208ENST00000439274 LCN2P80188 198 aa12.7□□□□□ -0.38
APP-208ENST00000439274 DMRTC2Q8IXT2 367 aaPredicted RBP12.7□□□□□ -0.38
APP-208ENST00000439274 INTS1Q8N201 2190 aaKnown RBP12.7□□□□□ -0.38
APP-208ENST00000439274 FDCSPQ8NFU4 85 aa12.7□□□□□ -0.38
APP-208ENST00000439274 TMEM18Q96B42 140 aa12.7□□□□□ -0.38
APP-208ENST00000439274 SFRP2Q96HF1 295 aa12.7□□□□□ -0.38
APP-208ENST00000439274 YTHDF2Q9Y5A9 579 aaKnown RBP12.7□□□□□ -0.38
APP-208ENST00000439274 CADP27708 2225 aa12.7□□□□□ -0.38
APP-208ENST00000439274 F6UZH7 168 aa12.7□□□□□ -0.38
APP-208ENST00000439274 NUPR1O60356 82 aa12.7□□□□□ -0.38
APP-208ENST00000439274 GCGP01275 180 aa12.7□□□□□ -0.38
APP-208ENST00000439274 IGHG3P01860 377 aa12.7□□□□□ -0.38
APP-208ENST00000439274 STAG3L2P0CL84 134 aa12.7□□□□□ -0.38
APP-208ENST00000439274 STAG3L3P0CL85 134 aa12.7□□□□□ -0.38
APP-208ENST00000439274 SELLP14151 372 aa12.7□□□□□ -0.38
APP-208ENST00000439274 LOXL3P58215 753 aa12.7□□□□□ -0.38
APP-208ENST00000439274 ERVK-16P61578 105 aa12.7□□□□□ -0.38
APP-208ENST00000439274 TCF15Q12870 199 aa12.7□□□□□ -0.38
APP-208ENST00000439274 GBGT1Q8N5D6 347 aa12.7□□□□□ -0.38
APP-208ENST00000439274 MISP3Q96FF7 219 aa12.7□□□□□ -0.38
APP-208ENST00000439274 CACNA1HO95180 2353 aa12.69□□□□□ -0.38
APP-208ENST00000439274 MYOD1P15172 320 aa12.69□□□□□ -0.38
APP-208ENST00000439274 TRIP6Q15654 476 aaKnown RBP12.69□□□□□ -0.38
APP-208ENST00000439274 PRSS33Q8NF86 280 aa12.69□□□□□ -0.38
APP-208ENST00000439274 S1PR3Q99500 378 aa12.69□□□□□ -0.38
APP-208ENST00000439274 JPT1Q9UK76 154 aa12.69□□□□□ -0.38
APP-208ENST00000439274 TCF19Q9Y242 345 aa12.69□□□□□ -0.38
APP-208ENST00000439274 CD99P14209 185 aa12.69□□□□□ -0.38
APP-208ENST00000439274 RPP30P78346 268 aaKnown RBP12.69□□□□□ -0.38
APP-208ENST00000439274 TMEM249Q2WGJ8 235 aa12.69□□□□□ -0.38
APP-208ENST00000439274 FAM201AQ5SY85 155 aa12.69□□□□□ -0.38
APP-208ENST00000439274 TRAT1Q6PIZ9 186 aa12.69□□□□□ -0.38
APP-208ENST00000439274 PIP4P1Q86T03 277 aa12.69□□□□□ -0.38
APP-208ENST00000439274 OCC1Q8TAD7 63 aa12.69□□□□□ -0.38
APP-208ENST00000439274 SEPSECSQ9HD40 501 aaKnown RBP12.69□□□□□ -0.38
APP-208ENST00000439274 ELOVL5Q9NYP7 299 aa12.69□□□□□ -0.38
APP-208ENST00000439274 PCNX2A6NKB5 2137 aa12.69□□□□□ -0.38
APP-208ENST00000439274 MDFIC2A0A1B0GVS7 189 aa12.68□□□□□ -0.38
APP-208ENST00000439274 SRRM5B3KS81 715 aa12.68□□□□□ -0.38
APP-208ENST00000439274 MPDU1O75352 247 aa12.68□□□□□ -0.38
APP-208ENST00000439274 FOXH1O75593 365 aa12.68□□□□□ -0.38
APP-208ENST00000439274 ARSJQ5FYB0 599 aaPredicted RBP12.68□□□□□ -0.38
APP-208ENST00000439274 MBNL2Q5VZF2 373 aaKnown RBP12.68□□□□□ -0.38
APP-208ENST00000439274 GCSAMQ8N6F7 178 aa12.68□□□□□ -0.38
APP-208ENST00000439274 YPEL1O60688 119 aa12.68□□□□□ -0.38
APP-208ENST00000439274 CXorf1O96002 111 aa12.68□□□□□ -0.38
APP-208ENST00000439274 IGLV1-44P01699 117 aa12.68□□□□□ -0.38
APP-208ENST00000439274 IL6RP08887 468 aaPredicted RBP12.68□□□□□ -0.38
APP-208ENST00000439274 YPEL2Q96QA6 119 aa12.68□□□□□ -0.38
APP-208ENST00000439274 FAM90A9PA6NNJ1 464 aa12.67□□□□□ -0.38
APP-208ENST00000439274 PRR33A8MZF0 331 aa12.67□□□□□ -0.38
APP-208ENST00000439274 FOXL1Q12952 345 aa12.67□□□□□ -0.38
APP-208ENST00000439274 C1orf162Q8NEQ5 155 aaPredicted RBP12.67□□□□□ -0.38
APP-208ENST00000439274 OR52E5Q8NH55 327 aa12.67□□□□□ -0.38
APP-208ENST00000439274 OTOGLQ3ZCN5 2332 aa12.67□□□□□ -0.38
APP-208ENST00000439274 GRIFINA4D1Z8 144 aa12.67□□□□□ -0.38
APP-208ENST00000439274 MGST3O14880 152 aa12.67□□□□□ -0.38
APP-208ENST00000439274 ADMP35318 185 aa12.67□□□□□ -0.38
APP-208ENST00000439274 PAX5Q02548 391 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms