RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 GAFA1Q96PS6 74 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 YPEL2Q96QA6 119 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 COL25A1Q9BXS0 654 aaPredicted RBP9.04□□□□□ -0.96
DDX56-203ENST00000421223 NCOR1P1Q9H4R4 102 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 LAMP3Q9UQV4 416 aa9.04□□□□□ -0.96
DDX56-203ENST00000421223 RRHO14718 337 aa9.03□□□□□ -0.96
DDX56-203ENST00000421223 THBDP07204 575 aa9.03□□□□□ -0.96
DDX56-203ENST00000421223 OR8U8P0C7N1 319 aa9.03□□□□□ -0.96
DDX56-203ENST00000421223 AGAP20933 346 aa9.03□□□□□ -0.96
DDX56-203ENST00000421223 TDGF1P3P51864 188 aa9.03□□□□□ -0.96
DDX56-203ENST00000421223 ZNF561Q8N587 486 aa9.03□□□□□ -0.96
DDX56-203ENST00000421223 LINC01560Q8TB33 94 aa9.03□□□□□ -0.96
DDX56-203ENST00000421223 RPUSD4Q96CM3 377 aaKnown RBP9.03□□□□□ -0.96
DDX56-203ENST00000421223 TMEM147Q9BVK8 224 aa9.03□□□□□ -0.96
DDX56-203ENST00000421223 PATZ1Q9HBE1 687 aaKnown RBP9.03□□□□□ -0.96
DDX56-203ENST00000421223 C5orf52A6NGY3 159 aa9.03□□□□□ -0.96
DDX56-203ENST00000421223 C1orf196B1AJZ1 125 aa9.03□□□□□ -0.96
DDX56-203ENST00000421223 NQO2P16083 231 aa9.03□□□□□ -0.96
DDX56-203ENST00000421223 TNFRSF1AP19438 455 aa9.03□□□□□ -0.96
DDX56-203ENST00000421223 RPS10P46783 165 aaKnown RBP9.03□□□□□ -0.96
DDX56-203ENST00000421223 MEOX2P50222 304 aa9.03□□□□□ -0.96
DDX56-203ENST00000421223 SNRPEP62304 92 aaKnown RBP9.03□□□□□ -0.96
DDX56-203ENST00000421223 RPL31P62899 125 aaKnown RBP9.03□□□□□ -0.96
DDX56-203ENST00000421223 TMEM41BQ5BJD5 291 aa9.03□□□□□ -0.96
DDX56-203ENST00000421223 PINX1Q96BK5 328 aaKnown RBP9.03□□□□□ -0.96
DDX56-203ENST00000421223 CIB3Q96Q77 187 aaPredicted RBP9.03□□□□□ -0.96
DDX56-203ENST00000421223 HIPK2Q9H2X6 1198 aa9.03□□□□□ -0.96
DDX56-203ENST00000421223 SMDT1Q9H4I9 107 aa9.03□□□□□ -0.96
DDX56-203ENST00000421223 C17orf100A8MU93 164 aa9.02□□□□□ -0.96
DDX56-203ENST00000421223 LYNX1G3V0Z9 82 aa9.02□□□□□ -0.96
DDX56-203ENST00000421223 LYNX1P0DP58 116 aa9.02□□□□□ -0.96
DDX56-203ENST00000421223 COL8A2P25067 703 aa9.02□□□□□ -0.96
DDX56-203ENST00000421223 CFHR2P36980 270 aa9.02□□□□□ -0.96
DDX56-203ENST00000421223 UBE2G2P60604 165 aa9.02□□□□□ -0.96
DDX56-203ENST00000421223 RHEBQ15382 184 aa9.02□□□□□ -0.96
DDX56-203ENST00000421223 UNKLQ9H9P5 680 aaKnown RBP9.02□□□□□ -0.96
DDX56-203ENST00000421223 SLC25A10Q9UBX3 287 aaPredicted RBP9.02□□□□□ -0.96
DDX56-203ENST00000421223 MALRD1Q5VYJ5 2156 aa9.02□□□□□ -0.97
DDX56-203ENST00000421223 TRAV38-1A0A0B4J264 116 aa9.02□□□□□ -0.97
DDX56-203ENST00000421223 DLX1P56177 255 aa9.02□□□□□ -0.97
DDX56-203ENST00000421223 SERF2P84101 59 aa9.02□□□□□ -0.97
DDX56-203ENST00000421223 KIAA0141Q14154 515 aaPredicted RBP9.02□□□□□ -0.97
DDX56-203ENST00000421223 CLEC12BQ2HXU8 276 aa9.02□□□□□ -0.97
DDX56-203ENST00000421223 STUMQ69YW2 141 aa9.02□□□□□ -0.97
DDX56-203ENST00000421223 SSMEM1Q8WWF3 244 aa9.02□□□□□ -0.97
DDX56-203ENST00000421223 RAXQ9Y2V3 346 aa9.02□□□□□ -0.97
DDX56-203ENST00000421223 PLXNB1O43157 2135 aa9.02□□□□□ -0.97
DDX56-203ENST00000421223 WNT2P09544 360 aa9.02□□□□□ -0.97
DDX56-203ENST00000421223 P0C879 139 aa9.02□□□□□ -0.97
DDX56-203ENST00000421223 BCL2P10415 239 aa9.02□□□□□ -0.97
DDX56-203ENST00000421223 ZNF506Q5JVG8 444 aa9.02□□□□□ -0.97
DDX56-203ENST00000421223 LYPD2Q6UXB3 125 aa9.02□□□□□ -0.97
DDX56-203ENST00000421223 LOC102723971A0A1B0GUV8 181 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 C15orf62A8K5M9 175 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 F2RL2O00254 374 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 UBE2CO00762 179 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 MAS1LP35410 378 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 ZNF383Q8NA42 475 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 OR4S2Q8NH73 311 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 TVP23CQ96ET8 276 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 YPEL4Q96NS1 127 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 TMEM204Q9BSN7 226 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 NPCDR1Q9BY65 106 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 ENY2Q9NPA8 101 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 NKX6-3A6NJ46 265 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 PLAUP00749 431 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 IGKV1-16P04430 117 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 HSPB1P04792 205 aaKnown RBP9.01□□□□□ -0.97
DDX56-203ENST00000421223 RAB5AP20339 215 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 CD1BP29016 333 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 SSX2Q16385 188 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 PDLIM3Q53GG5 364 aaPredicted RBP9.01□□□□□ -0.97
DDX56-203ENST00000421223 KHDC3LQ587J8 217 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 ZNF788Q6ZQV5 615 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 OR4F5Q8NH21 305 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 RAB24Q969Q5 203 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 FAM122AQ96E09 287 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 MALSU1Q96EH3 234 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 OR4F4Q96R69 305 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 PSMG3Q9BT73 122 aaPredicted RBP9.01□□□□□ -0.97
DDX56-203ENST00000421223 PARD6GQ9BYG4 376 aaPredicted RBP9.01□□□□□ -0.97
DDX56-203ENST00000421223 AURKAIP1Q9NWT8 199 aaPredicted RBP9.01□□□□□ -0.97
DDX56-203ENST00000421223 IDI2-AS1Q9NZ38 188 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 TCF19Q9Y242 345 aa9.01□□□□□ -0.97
DDX56-203ENST00000421223 PPIAL4EA0A075B759 164 aa9□□□□□ -0.97
DDX56-203ENST00000421223 hADV38S2A0JD32 116 aa9□□□□□ -0.97
DDX56-203ENST00000421223 VSTM5A8MXK1 200 aa9□□□□□ -0.97
DDX56-203ENST00000421223 PPIAL4DF5H284 164 aa9□□□□□ -0.97
DDX56-203ENST00000421223 PPIAL4FP0DN26 164 aa9□□□□□ -0.97
DDX56-203ENST00000421223 GRNP28799 593 aaKnown RBP9□□□□□ -0.97
DDX56-203ENST00000421223 RAB7AP51149 207 aa9□□□□□ -0.97
DDX56-203ENST00000421223 RBPJQ06330 500 aa9□□□□□ -0.97
DDX56-203ENST00000421223 CST9LP1Q5W188 147 aa9□□□□□ -0.97
DDX56-203ENST00000421223 OR4A47Q6IF82 309 aa9□□□□□ -0.97
DDX56-203ENST00000421223 TCF23Q7RTU1 214 aa9□□□□□ -0.97
DDX56-203ENST00000421223 PPIAL4AQ9Y536 164 aa9□□□□□ -0.97
DDX56-203ENST00000421223 K7ENP7 123 aa9□□□□□ -0.97
DDX56-203ENST00000421223 GATA4P43694 442 aa9□□□□□ -0.97
DDX56-203ENST00000421223 SPCS3P61009 180 aa9□□□□□ -0.97
DDX56-203ENST00000421223 ADIRFQ15847 76 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms