RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 TMEM106BQ9NUM4 274 aa9.59□□□□□ -0.87
PTCH1-205ENST00000418258 DNAL4O96015 105 aa9.59□□□□□ -0.87
PTCH1-205ENST00000418258 JPT1Q9UK76 154 aa9.59□□□□□ -0.87
PTCH1-205ENST00000418258 NPBWR2P48146 333 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 VAX1Q5SQQ9 334 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 RIPPLY2Q5TAB7 128 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 LMX1BO60663 402 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 RECKO95980 971 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 BCL2P10415 239 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 PPP1R32Q7Z5V6 425 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 S4R3C0 116 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 C7orf77A4D0Y5 90 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 HSPE1P61604 102 aaKnown RBP9.58□□□□□ -0.88
PTCH1-205ENST00000418258 TNFSF18Q9UNG2 199 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 SEC11BP0C7V7 166 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 GLRXP35754 106 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 VDAC2P45880 294 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-205ENST00000418258 TNFRSF9Q07011 255 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 TMEM45BQ96B21 275 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 TNFRSF18Q9Y5U5 241 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 CTSBP07858 339 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 C10orf128Q5T292 105 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 JMJD8Q96S16 334 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 MGAMO43451 1857 aa9.58□□□□□ -0.88
PTCH1-205ENST00000418258 NRXN2Q9P2S2 1712 aa9.57□□□□□ -0.88
PTCH1-205ENST00000418258 ZNF146Q15072 292 aa9.57□□□□□ -0.88
PTCH1-205ENST00000418258 TMEM91Q6ZNR0 172 aa9.57□□□□□ -0.88
PTCH1-205ENST00000418258 GOLT1AQ6ZVE7 132 aa9.57□□□□□ -0.88
PTCH1-205ENST00000418258 MIXL1Q9H2W2 232 aa9.57□□□□□ -0.88
PTCH1-205ENST00000418258 ZNF407Q9C0G0 2248 aa9.57□□□□□ -0.88
PTCH1-205ENST00000418258 HELZP42694 1942 aaKnown RBP9.57□□□□□ -0.88
PTCH1-205ENST00000418258 LINC00305Q7Z4B0 112 aa9.57□□□□□ -0.88
PTCH1-205ENST00000418258 CD1AP06126 327 aa9.57□□□□□ -0.88
PTCH1-205ENST00000418258 SAXO1Q8IYX7 474 aa9.57□□□□□ -0.88
PTCH1-205ENST00000418258 ZNF25P17030 456 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-205ENST00000418258 FAM3BP58499 235 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-205ENST00000418258 LY6DQ14210 128 aa9.57□□□□□ -0.88
PTCH1-205ENST00000418258 TCF24Q7RTU0 167 aa9.57□□□□□ -0.88
PTCH1-205ENST00000418258 SLC16A13Q7RTY0 426 aa9.57□□□□□ -0.88
PTCH1-205ENST00000418258 CBLN2Q8IUK8 224 aa9.57□□□□□ -0.88
PTCH1-205ENST00000418258 CLDND2Q8NHS1 167 aa9.57□□□□□ -0.88
PTCH1-205ENST00000418258 LINC01587Q99440 93 aa9.57□□□□□ -0.88
PTCH1-205ENST00000418258 GTSCR1Q86UQ5 136 aa9.57□□□□□ -0.88
PTCH1-205ENST00000418258 COL25A1Q9BXS0 654 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-205ENST00000418258 CDX1P47902 265 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-205ENST00000418258 AKIRIN1Q9H9L7 192 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-205ENST00000418258 OR5AC2Q9NZP5 309 aa9.57□□□□□ -0.88
PTCH1-205ENST00000418258 MOSP00540 346 aa9.56□□□□□ -0.88
PTCH1-205ENST00000418258 ERGP11308 486 aa9.56□□□□□ -0.88
PTCH1-205ENST00000418258 FSTP19883 344 aa9.56□□□□□ -0.88
PTCH1-205ENST00000418258 TMEM30BQ3MIR4 351 aa9.56□□□□□ -0.88
PTCH1-205ENST00000418258 TAF15Q92804 592 aaKnown RBP eCLIP9.56□□□□□ -0.88
PTCH1-205ENST00000418258 ALKBH7Q9BT30 221 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-205ENST00000418258 C7orf71A4D174 169 aa9.56□□□□□ -0.88
PTCH1-205ENST00000418258 ZG16O60844 167 aa9.56□□□□□ -0.88
PTCH1-205ENST00000418258 STHQ8IWL8 128 aa9.56□□□□□ -0.88
PTCH1-205ENST00000418258 MEGF10Q96KG7 1140 aa9.56□□□□□ -0.88
PTCH1-205ENST00000418258 WDR81Q562E7 1941 aa9.56□□□□□ -0.88
PTCH1-205ENST00000418258 C8orf88P0DMB2 117 aa9.56□□□□□ -0.88
PTCH1-205ENST00000418258 FAM57AQ8TBR7 257 aa9.56□□□□□ -0.88
PTCH1-205ENST00000418258 PEMTQ9UBM1 199 aa9.56□□□□□ -0.88
PTCH1-205ENST00000418258 TRGV2A0A075B6R0 118 aa9.56□□□□□ -0.88
PTCH1-205ENST00000418258 SELENOHQ8IZQ5 122 aaKnown RBP9.56□□□□□ -0.88
PTCH1-205ENST00000418258 MRPL13Q9BYD1 178 aaKnown RBP9.56□□□□□ -0.88
PTCH1-205ENST00000418258 AQP10Q96PS8 301 aa9.56□□□□□ -0.88
PTCH1-205ENST00000418258 MALP21145 153 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 FAM90A10PA6NDY2 464 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 FAM90A18PA6NE21 464 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 FAM90A16PA6NEW6 464 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 FAM90A20PA6NIJ5 464 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 FAM90A8PA6NJQ4 464 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 FAM90A7PA6NKC0 464 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 FAM90A22PA8MWA6 464 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 FAM90A12PA8MX19 464 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 FAM90A5PA8MXJ8 464 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 FAM90A23PA8MXZ1 464 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 PROB1E7EW31 1015 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 RPLP1P05386 114 aaKnown RBP9.55□□□□□ -0.88
PTCH1-205ENST00000418258 RFPL3SP0C7P2 107 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 FAM90A15PP0C7V4 464 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 FAM90A13PP0C7W8 464 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 FAM90A14PP0C7W9 464 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 FAM90A24PP0C7X0 464 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 RNASE4P34096 147 aaKnown RBP9.55□□□□□ -0.88
PTCH1-205ENST00000418258 LBHQ53QV2 105 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-205ENST00000418258 NPIPB3Q92617 1050 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 DPM3Q9P2X0 92 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 NOTCH3Q9UM47 2321 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 GPR183P32249 361 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 FOXA2Q9Y261 457 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-205ENST00000418258 LIMS1P48059 325 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 CRYBA2P53672 197 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 CLEC19AQ6UXS0 136 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 GDF15Q99988 308 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 IFT22Q9H7X7 185 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 FAM206AQ9NX38 181 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 M0R381 172 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 CELA3AP09093 270 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 COX5BP10606 129 aa9.55□□□□□ -0.88
PTCH1-205ENST00000418258 NSUN5P1Q3KNT7 163 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms