RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 MOGAT3Q86VF5 341 aa11.97□□□□□ -0.49
HDAC9-208ENST00000417496 FAM90A1Q86YD7 464 aa11.97□□□□□ -0.49
HDAC9-208ENST00000417496 STARD4Q96DR4 205 aa11.97□□□□□ -0.49
HDAC9-208ENST00000417496 IFI27L2Q9H2X8 130 aa11.97□□□□□ -0.49
HDAC9-208ENST00000417496 ZNF71Q9NQZ8 489 aaPredicted RBP11.97□□□□□ -0.49
HDAC9-208ENST00000417496 A0A0U1RQK1 487 aa11.97□□□□□ -0.49
HDAC9-208ENST00000417496 RBFOX2O43251 390 aaKnown RBP eCLIP11.97□□□□□ -0.49
HDAC9-208ENST00000417496 SPRY3O43610 288 aa11.97□□□□□ -0.49
HDAC9-208ENST00000417496 GATCO43716 136 aaKnown RBP11.97□□□□□ -0.49
HDAC9-208ENST00000417496 IGLV1-44P01699 117 aa11.97□□□□□ -0.49
HDAC9-208ENST00000417496 RELBQ01201 579 aa11.97□□□□□ -0.49
HDAC9-208ENST00000417496 PDLIM3Q53GG5 364 aaPredicted RBP11.97□□□□□ -0.49
HDAC9-208ENST00000417496 TGIF2LYQ8IUE0 185 aa11.97□□□□□ -0.49
HDAC9-208ENST00000417496 ANAPC16Q96DE5 110 aa11.97□□□□□ -0.49
HDAC9-208ENST00000417496 C1orf159Q96HA4 380 aa11.97□□□□□ -0.49
HDAC9-208ENST00000417496 OR2V2Q96R30 315 aa11.97□□□□□ -0.49
HDAC9-208ENST00000417496 TMEM140Q9NV12 185 aa11.97□□□□□ -0.49
HDAC9-208ENST00000417496 GVINP1Q7Z2Y8 2422 aa11.97□□□□□ -0.49
HDAC9-208ENST00000417496 TET2Q6N021 2002 aaPredicted RBP11.96□□□□□ -0.49
HDAC9-208ENST00000417496 ZNF891A8MT65 544 aaPredicted RBP11.96□□□□□ -0.49
HDAC9-208ENST00000417496 ZNF705GA8MUZ8 300 aaPredicted RBP11.96□□□□□ -0.49
HDAC9-208ENST00000417496 SRRM5B3KS81 715 aa11.96□□□□□ -0.49
HDAC9-208ENST00000417496 VDAC2P45880 294 aaPredicted RBP11.96□□□□□ -0.49
HDAC9-208ENST00000417496 SPCS3P61009 180 aa11.96□□□□□ -0.49
HDAC9-208ENST00000417496 TCTEX1D1Q8N7M0 179 aa11.96□□□□□ -0.49
HDAC9-208ENST00000417496 SEPSECSQ9HD40 501 aaKnown RBP11.96□□□□□ -0.49
HDAC9-208ENST00000417496 PLSCR4Q9NRQ2 329 aa11.96□□□□□ -0.49
HDAC9-208ENST00000417496 PXMP4Q9Y6I8 212 aa11.96□□□□□ -0.49
HDAC9-208ENST00000417496 PRR33A8MZF0 331 aa11.96□□□□□ -0.5
HDAC9-208ENST00000417496 IL3RAP26951 378 aa11.96□□□□□ -0.5
HDAC9-208ENST00000417496 DDTP30046 118 aa11.96□□□□□ -0.5
HDAC9-208ENST00000417496 ACTL10Q5JWF8 245 aa11.96□□□□□ -0.5
HDAC9-208ENST00000417496 MBNL2Q5VZF2 373 aaKnown RBP11.96□□□□□ -0.5
HDAC9-208ENST00000417496 SPATA31B1PQ5VZV4 182 aa11.96□□□□□ -0.5
HDAC9-208ENST00000417496 RPRMLQ8N4K4 120 aa11.96□□□□□ -0.5
HDAC9-208ENST00000417496 DIRC2Q96SL1 478 aa11.96□□□□□ -0.5
HDAC9-208ENST00000417496 S1PR3Q99500 378 aa11.96□□□□□ -0.5
HDAC9-208ENST00000417496 ATMQ13315 3056 aa11.96□□□□□ -0.5
HDAC9-208ENST00000417496 TNCP24821 2201 aa11.96□□□□□ -0.5
HDAC9-208ENST00000417496 A0A087X0M5 115 aa11.95□□□□□ -0.5
HDAC9-208ENST00000417496 SPAARA0A1B0GVQ0 90 aa11.95□□□□□ -0.5
HDAC9-208ENST00000417496 A0A1B0GX30 115 aa11.95□□□□□ -0.5
HDAC9-208ENST00000417496 ZNF320A2RRD8 509 aa11.95□□□□□ -0.5
HDAC9-208ENST00000417496 GGCTO75223 188 aaKnown RBP11.95□□□□□ -0.5
HDAC9-208ENST00000417496 SEM1Q6ZVN7 128 aa11.95□□□□□ -0.5
HDAC9-208ENST00000417496 FAM122AQ96E09 287 aa11.95□□□□□ -0.5
HDAC9-208ENST00000417496 GGTLC1Q9BX51 225 aa11.95□□□□□ -0.5
HDAC9-208ENST00000417496 HINT2Q9BX68 163 aa11.95□□□□□ -0.5
HDAC9-208ENST00000417496 KALRNO60229 2985 aa11.95□□□□□ -0.5
HDAC9-208ENST00000417496 SCO2A0A1W2PP80 73 aa11.95□□□□□ -0.5
HDAC9-208ENST00000417496 PRSS46E5RG02 174 aa11.95□□□□□ -0.5
HDAC9-208ENST00000417496 M0R1B8 84 aa11.95□□□□□ -0.5
HDAC9-208ENST00000417496 FOXH1O75593 365 aa11.95□□□□□ -0.5
HDAC9-208ENST00000417496 THBS3P49746 956 aa11.95□□□□□ -0.5
HDAC9-208ENST00000417496 PKIAP61925 76 aa11.95□□□□□ -0.5
HDAC9-208ENST00000417496 JOSD1Q15040 202 aaPredicted RBP11.95□□□□□ -0.5
HDAC9-208ENST00000417496 BHLHA15Q7RTS1 189 aaPredicted RBP11.95□□□□□ -0.5
HDAC9-208ENST00000417496 TCF23Q7RTU1 214 aa11.95□□□□□ -0.5
HDAC9-208ENST00000417496 DEFB108BQ8NET1 73 aa11.95□□□□□ -0.5
HDAC9-208ENST00000417496 TCF19Q9Y242 345 aa11.95□□□□□ -0.5
HDAC9-208ENST00000417496 MGST3O14880 152 aa11.94□□□□□ -0.5
HDAC9-208ENST00000417496 VENTXO95231 258 aa11.94□□□□□ -0.5
HDAC9-208ENST00000417496 ERVK-16P61578 105 aa11.94□□□□□ -0.5
HDAC9-208ENST00000417496 ARSJQ5FYB0 599 aaPredicted RBP11.94□□□□□ -0.5
HDAC9-208ENST00000417496 CT45A1Q5HYN5 189 aa11.94□□□□□ -0.5
HDAC9-208ENST00000417496 C1orf162Q8NEQ5 155 aaPredicted RBP11.94□□□□□ -0.5
HDAC9-208ENST00000417496 CT45A3Q8NHU0 189 aa11.94□□□□□ -0.5
HDAC9-208ENST00000417496 SARAFQ96BY9 339 aa11.94□□□□□ -0.5
HDAC9-208ENST00000417496 ZNRD1Q9P1U0 126 aa11.94□□□□□ -0.5
HDAC9-208ENST00000417496 JPT1Q9UK76 154 aa11.94□□□□□ -0.5
HDAC9-208ENST00000417496 PROCRQ9UNN8 238 aa11.94□□□□□ -0.5
HDAC9-208ENST00000417496 PDE6DO43924 150 aa11.94□□□□□ -0.5
HDAC9-208ENST00000417496 YPEL1O60688 119 aa11.94□□□□□ -0.5
HDAC9-208ENST00000417496 ZNF664Q8N3J9 261 aa11.94□□□□□ -0.5
HDAC9-208ENST00000417496 SGMS2Q8NHU3 365 aa11.94□□□□□ -0.5
HDAC9-208ENST00000417496 LOXL4Q96JB6 756 aa11.94□□□□□ -0.5
HDAC9-208ENST00000417496 YPEL2Q96QA6 119 aa11.94□□□□□ -0.5
HDAC9-208ENST00000417496 CALYQ9NYX4 217 aa11.94□□□□□ -0.5
HDAC9-208ENST00000417496 YTHDF2Q9Y5A9 579 aaKnown RBP11.94□□□□□ -0.5
HDAC9-208ENST00000417496 SLC25A15Q9Y619 301 aa11.94□□□□□ -0.5
HDAC9-208ENST00000417496 TSTD3H0UI37 97 aa11.93□□□□□ -0.5
HDAC9-208ENST00000417496 CGAP01215 116 aa11.93□□□□□ -0.5
HDAC9-208ENST00000417496 OPRK1P41145 380 aa11.93□□□□□ -0.5
HDAC9-208ENST00000417496 DEFB109BQ30KR1 87 aa11.93□□□□□ -0.5
HDAC9-208ENST00000417496 OTOGLQ3ZCN5 2332 aa11.93□□□□□ -0.5
HDAC9-208ENST00000417496 DSCAMO60469 2012 aa11.93□□□□□ -0.5
HDAC9-208ENST00000417496 SAA2-SAA4A0A096LPE2 208 aa11.93□□□□□ -0.5
HDAC9-208ENST00000417496 NUPR1O60356 82 aa11.93□□□□□ -0.5
HDAC9-208ENST00000417496 SAA2P0DJI9 122 aaPredicted RBP11.93□□□□□ -0.5
HDAC9-208ENST00000417496 SRP14P37108 136 aaKnown RBP11.93□□□□□ -0.5
HDAC9-208ENST00000417496 AARDQ4LEZ3 155 aa11.93□□□□□ -0.5
HDAC9-208ENST00000417496 KCNIP4Q6PIL6 250 aa11.93□□□□□ -0.5
HDAC9-208ENST00000417496 MOB3BQ86TA1 216 aa11.93□□□□□ -0.5
HDAC9-208ENST00000417496 TMEM256Q8N2U0 113 aa11.93□□□□□ -0.5
HDAC9-208ENST00000417496 DEFB124Q8NES8 71 aa11.93□□□□□ -0.5
HDAC9-208ENST00000417496 OCC1Q8TAD7 63 aa11.93□□□□□ -0.5
HDAC9-208ENST00000417496 ITLN1Q8WWA0 313 aa11.93□□□□□ -0.5
HDAC9-208ENST00000417496 SNRNP40Q96DI7 357 aaKnown RBP11.93□□□□□ -0.5
HDAC9-208ENST00000417496 KCNIP2Q9NS61 270 aa11.93□□□□□ -0.5
HDAC9-208ENST00000417496 ARFGEF3Q5TH69 2177 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms