RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 CHST5Q9GZS9 411 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 ST6GALNAC2Q9UJ37 374 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 TRAV21A0A0B4J279 112 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 GOLT1AQ6ZVE7 132 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 OR4D11Q8NGI4 311 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 WNT2BQ93097 391 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 SPSB4Q96A44 273 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 NLRC5Q86WI3 1866 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 EPOPA6NHQ4 379 aa9.65□□□□□ -0.87
PRPF40A-202ENST00000410080 GPR183P32249 361 aa9.65□□□□□ -0.87
PRPF40A-202ENST00000410080 PLP1P60201 277 aa9.65□□□□□ -0.87
PRPF40A-202ENST00000410080 ZPLD1Q8TCW7 415 aa9.65□□□□□ -0.87
PRPF40A-202ENST00000410080 SEMA5BQ9P283 1151 aa9.65□□□□□ -0.87
PRPF40A-202ENST00000410080 DTX4Q9Y2E6 619 aa9.65□□□□□ -0.87
PRPF40A-202ENST00000410080 IGHV3-11P01762 117 aa9.65□□□□□ -0.87
PRPF40A-202ENST00000410080 MUC21A0A0G2JKD1 596 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 MUC21A0A140T8X8 626 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 LOC101059948A0A1B0GTJ6 334 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 KIAA0040Q15053 153 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 MUC21Q5SSG8 566 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 ZAR1Q86SH2 424 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 C18orf15Q96N68 181 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 EP300Q09472 2414 aaPredicted RBP9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 CXorf51AA0A1B0GTR3 108 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 MOSP00540 346 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 LTBP4Q8N2S1 1624 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 C10orf126Q8N4M7 172 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 VWA8A3KMH1 1905 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 TRGV4A0A0C4DH28 118 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 A0A1W2PQM1 296 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 C1orf53Q5VUE5 145 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 KLF14Q8TD94 323 aaPredicted RBP9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 SCARF2Q96GP6 870 aaPredicted RBP9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 SH3BGRL3Q9H299 93 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 SDF2L1Q9HCN8 221 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 COL24A1Q17RW2 1714 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 C3orf56Q8N813 242 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 ZNF430Q9H8G1 570 aaPredicted RBP9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 TMEM74BQ9NUR3 256 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 RCC1P18754 421 aaPredicted RBP9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 DTX2Q86UW9 622 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 LRRC3BQ96PB8 259 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 MRPL16Q9NX20 251 aaKnown RBP9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 MGST3O14880 152 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 CDKN1AP38936 164 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 LINC00305Q7Z4B0 112 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 MSRB3Q8IXL7 192 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 DNAJC4Q9NNZ3 241 aa9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 FOXA2Q9Y261 457 aaPredicted RBP9.64□□□□□ -0.87
PRPF40A-202ENST00000410080 NDUFA3O95167 84 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 A0A0G2JLM5 398 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 CTXND1A0A1B0GTU2 59 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 FOXJ2Q9P0K8 574 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 A0A1W2PQF6 199 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 FXYD1O00168 92 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 TDGF1P3P51864 188 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 WDR82Q6UXN9 313 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 ACACAQ13085 2346 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 SLC25A28Q96A46 364 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 FNDC1Q4ZHG4 1894 aaPredicted RBP9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 A0A0J9YW62 118 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 A0A1W2PPV9 198 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 ANKRD20A5PA0PJZ0 165 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 RPS11P62280 158 aaKnown RBP eCLIP9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 TMEM52Q8NDY8 209 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 C8orf46Q8TAG6 207 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 ELOVL5Q9NYP7 299 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 TMEM131Q92545 1883 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 RLFQ13129 1914 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 H3BQ15 152 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 DNM1P46Q6ZS02 220 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 JKAMPQ9P055 326 aa9.63□□□□□ -0.87
PRPF40A-202ENST00000410080 H7C1H1 209 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 RPS20P60866 119 aaKnown RBP9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 FGF12P61328 243 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 ABLIM2Q6H8Q1 611 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 EIF3GO75821 320 aaKnown RBP eCLIP9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 RPL35AP18077 110 aaKnown RBP9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 OR51M1Q9H341 326 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 ODAMA1E959 279 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 H3BRM9 83 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 MESP2Q0VG99 397 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 MIC13Q5XKP0 118 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 RNASEH2CQ8TDP1 164 aaKnown RBP9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 ABHD17AQ96GS6 310 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 MED12LQ86YW9 2145 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 THSD7AQ9UPZ6 1657 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 TCRBV16S1A1N1A0A5B0 115 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 LDLRAD4O15165 306 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 TCF21O43680 179 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 TCF24Q7RTU0 167 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 CLDND2Q8NHS1 167 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 WDR34Q96EX3 536 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 CD160O95971 181 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 SEC11BP0C7V7 166 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 MDKP21741 143 aaPredicted RBP9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 HOXA6P31267 233 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 ZNRF1Q8ND25 227 aa9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 ZNF107Q9UII5 783 aaPredicted RBP9.62□□□□□ -0.87
PRPF40A-202ENST00000410080 CD7P09564 240 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms