RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 SMPXQ9UHP9 88 aa8.5□□□□□ -1.05
PTPRM-203ENST00000400060 H0Y8X5 98 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 RTN4RL2Q86UN3 420 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 ZADH2Q8N4Q0 377 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 OCC1Q8TAD7 63 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 AAMDCQ9H7C9 122 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 A0A0A6YYD4 124 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 IL11P20809 199 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 SSR4P51571 173 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 GNB1P62873 340 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 CALHM1Q8IU99 346 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 IGKV1-8A0A0C4DH67 115 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 hADV38S2A0JD32 116 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 FCGR3BO75015 233 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 SRFP11831 508 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 GAGE5Q13069 117 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 GAGE6Q13070 117 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 TPRX1Q8N7U7 411 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 YPEL1O60688 119 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 YPEL2Q96QA6 119 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 MS4A5Q9H3V2 200 aa8.49□□□□□ -1.05
PTPRM-203ENST00000400060 A0A1W2PNR3 127 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 SCRG1O75711 98 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 GOSR1O95249 250 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 NMSQ5H8A3 153 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 TMEM196Q5HYL7 178 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 ABHD17BQ5VST6 288 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 MRPL13Q9BYD1 178 aaKnown RBP8.48□□□□□ -1.05
PTPRM-203ENST00000400060 MAP1LC3AQ9H492 121 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 BOKQ9UMX3 212 aaPredicted RBP8.48□□□□□ -1.05
PTPRM-203ENST00000400060 LHFPL6Q9Y693 200 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 LOC107984156A0A0G2JMH3 177 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 ORM1P02763 201 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 COX6CP09669 75 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 ARL17AQ8IVW1 177 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 ST6GALNAC3Q8NDV1 305 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 LINC00470Q9BZP3 86 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 TSSC4Q9Y5U2 329 aaPredicted RBP8.48□□□□□ -1.05
PTPRM-203ENST00000400060 BRCA1P38398 1863 aaKnown RBP8.48□□□□□ -1.05
PTPRM-203ENST00000400060 AREGP15514 252 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 C1orf53Q5VUE5 145 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 FAM90A9PA6NNJ1 464 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 CD55P08174 381 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 ANOS1P23352 680 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 IGLV3-21P80748 117 aaPredicted RBP8.48□□□□□ -1.05
PTPRM-203ENST00000400060 SLC23A3Q6PIS1 610 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 CCL4L1Q8NHW4 92 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 HIF1ANQ9NWT6 349 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 CHD5Q8TDI0 1954 aa8.48□□□□□ -1.05
PTPRM-203ENST00000400060 NRG2O14511 850 aaPredicted RBP8.47□□□□□ -1.05
PTPRM-203ENST00000400060 GPR6P46095 362 aaPredicted RBP8.47□□□□□ -1.05
PTPRM-203ENST00000400060 LHX2P50458 406 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 DSCR4P56555 118 aaPredicted RBP8.47□□□□□ -1.05
PTPRM-203ENST00000400060 OR1D5P58170 312 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 RHOGP84095 191 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 MIC13Q5XKP0 118 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 PATE1Q8WXA2 126 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 RPP21Q9H633 154 aaKnown RBP8.47□□□□□ -1.05
PTPRM-203ENST00000400060 J3QT63 122 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 SCTP09683 121 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 NBEAP1P0C6P0 100 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 GABRG2P18507 467 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 Q6ZS49 121 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 GGTLC1Q9BX51 225 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 FAM234AQ9H0X4 552 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 AMMECR1Q9Y4X0 333 aaPredicted RBP8.47□□□□□ -1.05
PTPRM-203ENST00000400060 HILPDAQ9Y5L2 63 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 MYLKQ15746 1914 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 TMEM8BA6NDV4 472 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 ATP5LO75964 103 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 SPEM1Q8N4L4 309 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 GATAD1Q8WUU5 269 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 TMEM171Q8WVE6 324 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 CLEC7AQ9BXN2 247 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 A0A1W2PRE2 83 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 NAPSAO96009 420 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 POU2F2P09086 479 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 CSRP1P21291 193 aaKnown RBP8.47□□□□□ -1.05
PTPRM-203ENST00000400060 RPS16P62249 146 aaKnown RBP8.47□□□□□ -1.05
PTPRM-203ENST00000400060 EGR4Q05215 589 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 FAM27BQ5VT28 67 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 ZNF841Q6ZN19 808 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 RBPMS2Q6ZRY4 209 aaKnown RBP8.47□□□□□ -1.05
PTPRM-203ENST00000400060 C10orf126Q8N4M7 172 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 CITED1Q99966 193 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 RSPO3Q9BXY4 272 aaPredicted RBP8.47□□□□□ -1.05
PTPRM-203ENST00000400060 PLSCR4Q9NRQ2 329 aa8.47□□□□□ -1.05
PTPRM-203ENST00000400060 F11RQ9Y624 299 aaKnown RBP8.47□□□□□ -1.05
PTPRM-203ENST00000400060 A0A1W2PPM0 123 aa8.46□□□□□ -1.05
PTPRM-203ENST00000400060 AHRRA9YTQ3 701 aa8.46□□□□□ -1.05
PTPRM-203ENST00000400060 SYNGR1O43759 233 aa8.46□□□□□ -1.05
PTPRM-203ENST00000400060 PEBP1P30086 187 aaKnown RBP8.46□□□□□ -1.05
PTPRM-203ENST00000400060 ZNF137PP52743 207 aa8.46□□□□□ -1.05
PTPRM-203ENST00000400060 POU2AF1Q16633 256 aa8.46□□□□□ -1.05
PTPRM-203ENST00000400060 FNDC7Q5VTL7 733 aa8.46□□□□□ -1.05
PTPRM-203ENST00000400060 C5orf49A4QMS7 147 aa8.46□□□□□ -1.05
PTPRM-203ENST00000400060 A8MWV9 139 aa8.46□□□□□ -1.05
PTPRM-203ENST00000400060 ZNF83P51522 516 aa8.46□□□□□ -1.05
PTPRM-203ENST00000400060 EMP1P54849 157 aa8.46□□□□□ -1.05
PTPRM-203ENST00000400060 TCF24Q7RTU0 167 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms